##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933126.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 783066 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14835786510971 33.0 31.0 34.0 30.0 34.0 2 32.330210991155276 34.0 31.0 34.0 30.0 34.0 3 32.415631632582695 34.0 31.0 34.0 30.0 34.0 4 35.91836192607009 37.0 35.0 37.0 35.0 37.0 5 35.19737033659998 37.0 35.0 37.0 35.0 37.0 6 34.80960353278012 37.0 35.0 37.0 32.0 37.0 7 35.62306880901482 37.0 35.0 37.0 33.0 37.0 8 35.82684345891662 37.0 35.0 37.0 35.0 37.0 9 37.73396367611414 39.0 38.0 39.0 35.0 39.0 10 37.24352098035159 39.0 37.0 39.0 34.0 39.0 11 37.09128860147165 39.0 37.0 39.0 33.0 39.0 12 36.96833600232931 39.0 37.0 39.0 33.0 39.0 13 36.88871436124158 39.0 37.0 39.0 33.0 39.0 14 37.99708709099872 40.0 37.0 41.0 33.0 41.0 15 38.08566583148802 40.0 37.0 41.0 33.0 41.0 16 38.126137515867114 40.0 37.0 41.0 33.0 41.0 17 38.03795465516317 40.0 37.0 41.0 33.0 41.0 18 38.012227577241255 40.0 37.0 41.0 33.0 41.0 19 38.006192326061914 40.0 37.0 41.0 34.0 41.0 20 37.86150848076663 40.0 36.0 41.0 33.0 41.0 21 37.78018200253874 40.0 36.0 41.0 33.0 41.0 22 37.80511093573211 40.0 36.0 41.0 33.0 41.0 23 37.69942380335757 39.0 36.0 41.0 33.0 41.0 24 37.656143926565576 39.0 36.0 41.0 33.0 41.0 25 37.54362595234629 39.0 36.0 41.0 33.0 41.0 26 37.49182061282191 39.0 35.0 41.0 33.0 41.0 27 37.42883869303481 39.0 35.0 41.0 33.0 41.0 28 37.36863431690305 39.0 35.0 41.0 32.0 41.0 29 37.30463715702125 39.0 35.0 41.0 32.0 41.0 30 37.20188847427931 39.0 35.0 41.0 32.0 41.0 31 37.10126860315733 39.0 35.0 41.0 32.0 41.0 32 37.00883961249754 39.0 35.0 41.0 31.0 41.0 33 36.89210743411156 39.0 35.0 41.0 31.0 41.0 34 36.711404913506655 39.0 35.0 41.0 31.0 41.0 35 36.58955694666861 39.0 35.0 41.0 30.0 41.0 36 36.43712279680129 39.0 35.0 40.0 30.0 41.0 37 36.38263569098901 39.0 35.0 40.0 30.0 41.0 38 36.37410512013036 39.0 35.0 40.0 30.0 41.0 39 36.27078943537327 39.0 35.0 40.0 30.0 41.0 40 36.14869117034835 38.0 35.0 40.0 30.0 41.0 41 35.932575287395956 38.0 35.0 40.0 29.0 41.0 42 35.94142767020915 38.0 35.0 40.0 30.0 41.0 43 35.8260146654305 38.0 35.0 40.0 29.0 41.0 44 35.816339874289014 38.0 35.0 40.0 29.0 41.0 45 35.84301706369578 38.0 35.0 40.0 29.0 41.0 46 35.61364176199707 38.0 34.0 40.0 28.0 41.0 47 35.469717750483355 38.0 34.0 40.0 28.0 41.0 48 35.40495820275686 37.0 34.0 40.0 28.0 41.0 49 35.48193511147208 37.0 34.0 40.0 28.0 41.0 50 35.24442001057382 37.0 34.0 40.0 27.0 41.0 51 34.1902355612426 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 14.0 10 17.0 11 16.0 12 11.0 13 15.0 14 16.0 15 24.0 16 60.0 17 91.0 18 161.0 19 349.0 20 636.0 21 1113.0 22 1804.0 23 2508.0 24 3401.0 25 4875.0 26 6291.0 27 7892.0 28 9264.0 29 11235.0 30 13750.0 31 17675.0 32 23509.0 33 32627.0 34 53677.0 35 69518.0 36 71913.0 37 105940.0 38 162684.0 39 181932.0 40 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.049357270013 4.416230560386992 51.76856101529118 18.765851154308834 2 18.441868246099308 7.6301359016992185 52.36825503852805 21.559740813673432 3 20.040456360000306 7.70228818515936 51.343820316550584 20.91343513828975 4 17.982647695085728 4.643286772762449 53.65652448197215 23.717541050179676 5 19.797054143584322 7.655293423542843 48.617102517540026 23.930549915332808 6 21.41339299624808 9.31377431787359 52.24783096188571 17.025001723992613 7 81.99257789254035 1.8753208541808737 11.863112432413105 4.268988820865674 8 83.50943598623871 4.760007457864344 7.467186673920207 4.263369881976742 9 78.42135911915472 4.754771628445112 9.12949866294795 7.69437058945223 10 41.4182201755663 27.3462262440203 15.758952629791104 15.476600950622297 11 29.8347776560341 22.37614709360386 27.090053711947654 20.699021538414385 12 25.250234335292298 20.759680537783535 31.866151767539392 22.123933359384775 13 23.40581764500055 22.760533594869397 34.24117507336547 19.59247368676459 14 20.897983056345186 25.66488648466413 32.25820045819893 21.17893000079176 15 18.33689625140154 22.120613077314044 37.466318292455554 22.076172378828858 16 20.969496824022496 21.226307871877978 32.46444105605402 25.339754248045505 17 20.621888831848146 21.47430740193036 31.343845857181897 26.559957909039593 18 21.656156696881233 20.784454950157457 31.542168859329866 26.017219493631444 19 23.119251761665044 22.926036885779745 29.48257235022335 24.47213900233186 20 25.76423954047296 22.868059652698495 30.175361974597287 21.192338832231254 21 25.034671407007835 25.41944101774308 28.634112577994703 20.91177499725438 22 23.349883662424368 21.698937254331053 29.509645419415477 25.4415336638291 23 22.448299377064 24.945917713194035 28.384708313220088 24.221074596521877 24 23.213368988054647 22.62120945105521 28.894371611077485 25.271049949812657 25 21.146621102180404 26.09831099805125 27.26411311434796 25.490954785420385 26 20.444892256846806 24.50649115144828 28.569750187085123 26.47886640461979 27 21.340857603318238 25.192129399054487 28.16276022710729 25.30425277051998 28 19.19033644673629 24.164246691849726 30.755262008566326 25.89015485284765 29 21.635596488674008 22.17297137150636 29.269180375600524 26.92225176421911 30 22.75542546860673 24.30369853882048 29.52586372029944 23.415012272273348 31 25.05229444261403 23.714220768108945 25.72005424830091 25.513430540976113 32 25.88849471181229 24.882321541223856 25.661949312063097 23.56723443490076 33 24.437531446902305 23.090901660907253 26.425103375705238 26.0464635164852 34 22.987972916714554 23.03701092883614 28.29838097938105 25.676635175068256 35 23.07174618742226 23.720605925937278 27.28633346359055 25.921314423049907 36 23.475543568485925 24.19719410624392 27.663440884931795 24.663821440338364 37 22.635512204590675 25.658501326835797 28.172210260693227 23.533776207880305 38 23.80450689980155 25.23439914387804 26.095246122293652 24.86584783402676 39 25.060722850947432 22.88338403148649 28.372448810189688 23.68344430737639 40 25.381002367616524 22.223797227819876 28.43068144958407 23.964518954979532 41 21.53866979283994 23.326513984772674 29.018626782416806 26.116189439970576 42 23.564169559143163 22.959239706487065 28.22520707066837 25.2513836637014 43 22.692595515575952 22.425568215195142 28.74687446524303 26.134961803985874 44 22.3522666033259 22.772026878960393 28.46937550602376 26.40633101168995 45 23.021048034265313 22.357885542214834 26.54603826497383 28.075028158546022 46 24.92714534917874 22.991293198785286 27.86227469970603 24.219286752329943 47 21.235119389681074 23.43263530787954 31.330309322585837 24.00193597985355 48 22.277177147264727 23.45906986128883 29.349505661080933 24.914247330365512 49 23.637598874168972 21.355415763166835 30.79255133028378 24.214434032380414 50 23.116953104846846 21.752189470619335 29.339161705399036 25.791695719134783 51 21.590261868092856 21.760107066326466 27.855761838721126 28.79386922685955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 95.0 1 487.0 2 879.0 3 2417.0 4 3955.0 5 2759.0 6 1563.0 7 1585.5 8 1608.0 9 1631.5 10 1655.0 11 1629.5 12 1604.0 13 1623.0 14 1642.0 15 1787.0 16 1932.0 17 1849.5 18 1767.0 19 1741.0 20 1715.0 21 1847.0 22 1979.0 23 2455.5 24 2932.0 25 3551.0 26 4708.0 27 5246.0 28 6592.5 29 7939.0 30 9326.5 31 10714.0 32 12048.5 33 13383.0 34 15371.0 35 17359.0 36 18631.5 37 19904.0 38 22372.5 39 24841.0 40 28743.0 41 32645.0 42 36274.0 43 39903.0 44 42118.0 45 44333.0 46 48081.5 47 51830.0 48 66646.0 49 81462.0 50 80881.0 51 80300.0 52 76704.5 53 73109.0 54 63792.5 55 54476.0 56 48951.5 57 43427.0 58 40851.0 59 38275.0 60 35082.0 61 31889.0 62 27866.0 63 23843.0 64 21599.5 65 19356.0 66 16548.5 67 13741.0 68 11245.0 69 8749.0 70 7717.5 71 6686.0 72 5839.5 73 4993.0 74 3975.0 75 2428.5 76 1900.0 77 1506.5 78 1113.0 79 942.5 80 772.0 81 521.0 82 270.0 83 175.0 84 80.0 85 60.0 86 40.0 87 30.0 88 20.0 89 14.0 90 8.0 91 6.5 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 783066.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.953968981382424 #Duplication Level Percentage of deduplicated Percentage of total 1 75.66911918987519 24.17928687441801 2 10.289926348883597 6.576079747458724 3 3.552183043867834 3.4051904039983607 4 1.6483179636960226 2.1068120433359256 5 0.9262912440393909 1.4799340839880417 6 0.6533892207279832 1.2527027335146963 7 0.4400587265175615 0.9843136027990166 8 0.3569248512007231 0.9124132499161954 9 0.29567766106526566 0.8503267329150483 >10 5.874945645528559 47.15459814841073 >50 0.24101256600932786 4.719639326600263 >100 0.04622700011260783 2.4468696829885435 >500 0.0023706153903901455 0.6256997135798577 >1k 0.0031608205205201937 2.638266124834198 >5k 3.951025650650242E-4 0.6678675312424227 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGC 5290 0.675549698237441 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCG 4195 0.5357147417969877 No Hit GAATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTC 4120 0.5261370050544909 No Hit CTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGCT 2626 0.33534848914395465 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 2517 0.32142884507819264 No Hit GCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 2442 0.31185110833569585 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2012 0.2569387510120475 No Hit TCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCTGC 1866 0.2382940901533204 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCACGGTGTT 1119 0.14289983219805227 No Hit GAACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCTTCT 957 0.12221192083425919 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTC 938 0.11978556085949332 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTATGCCGTCT 916 0.1169760914150276 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACGGTGTTCGTA 876 0.11186796515236264 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3633154804320453 0.0 2 0.0 0.0 0.0 1.33756286187882 0.0 3 0.0 0.0 0.0 1.813384823246061 0.0 4 0.0 0.0 0.0 2.4931487256502005 0.0 5 0.0 0.0 0.0 3.886390163792069 0.0 6 0.0 0.0 0.0 4.503707222635129 0.0 7 0.0 0.0 0.0 5.1866637039534345 0.0 8 0.0 0.0 0.0 6.191049030349932 0.0 9 0.0 0.0 0.0 6.667509507500006 0.0 10 0.0 0.0 0.0 8.07645843389957 0.0 11 0.0 0.0 0.0 9.485024250829431 0.0 12 0.0 0.0 0.0 11.682157059558198 0.0 13 0.0 0.0 0.0 12.144825595799077 0.0 14 0.0 0.0 0.0 12.331144501229781 0.0 15 0.0 0.0 0.0 12.669302459818201 0.0 16 0.0 0.0 0.0 13.256736980024673 0.0 17 0.0 0.0 0.0 14.077357464121798 0.0 18 0.0 0.0 0.0 14.977153905290232 0.0 19 0.0 0.0 0.0 15.775937149614464 0.0 20 0.0 0.0 0.0 16.47396260340763 0.0 21 0.0 0.0 0.0 17.273384363514698 0.0 22 0.0 0.0 0.0 18.178672040415496 0.0 23 0.0 0.0 0.0 19.02202368638148 0.0 24 0.0 0.0 0.0 19.655431342951935 0.0 25 1.27703156566624E-4 0.0 0.0 20.225115124395646 0.0 26 1.27703156566624E-4 0.0 0.0 20.725583794980246 0.0 27 1.27703156566624E-4 0.0 0.0 21.238439671751806 0.0 28 1.27703156566624E-4 0.0 0.0 21.772366569356862 0.0 29 1.27703156566624E-4 0.0 0.0 22.34511522655817 0.0 30 1.27703156566624E-4 0.0 0.0 23.000743232371217 0.0 31 1.27703156566624E-4 0.0 0.0 23.557018182375433 0.0 32 1.27703156566624E-4 0.0 0.0 24.08660317265722 0.0 33 2.55406313133248E-4 0.0 0.0 24.649390983646335 0.0 34 2.55406313133248E-4 0.0 0.0 25.18625505385242 0.0 35 2.55406313133248E-4 0.0 0.0 25.78122406029632 0.0 36 2.55406313133248E-4 0.0 0.0 26.30020968858308 0.0 37 2.55406313133248E-4 0.0 0.0 26.830177788334574 0.0 38 2.55406313133248E-4 0.0 0.0 27.35529316813653 0.0 39 2.55406313133248E-4 0.0 0.0 27.90377822559018 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCACGT 25 3.8896633E-5 45.0 15 CGCGATC 20 7.0319074E-4 45.0 21 TAACGAA 20 7.0319074E-4 45.0 19 CCGTCGA 20 7.0319074E-4 45.0 35 GTTACGG 35 1.211265E-7 45.0 2 AATTCGC 25 3.8896633E-5 45.0 13 CATACGT 20 7.0319074E-4 45.0 1 GCGATAT 20 7.0319074E-4 45.0 9 ACCGTTA 25 3.8896633E-5 45.0 23 CAATCGG 25 3.8896633E-5 45.0 20 TACGTCG 40 6.8102963E-9 45.0 38 ACGCGCA 25 3.8896633E-5 45.0 15 CGATGAA 215 0.0 42.906975 19 TACGAAT 75 0.0 42.0 12 AGCTACG 75 0.0 42.0 9 TTATGCG 55 6.002665E-11 40.909092 1 GGCGATA 50 1.0804797E-9 40.5 8 CCGATGA 230 0.0 40.108692 18 TCGATTG 45 1.9270374E-8 40.000004 1 TATGGGA 480 0.0 39.843746 4 >>END_MODULE