SRR2933124.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933124.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1318515
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14607	1.1078372259701255	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT	5739	0.4352623974698809	No Hit
TCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	5625	0.42661630698171804	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	4542	0.34447844734417127	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	4399	0.3336329127844583	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3041	0.23063825591669415	No Hit
TCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	2636	0.1999218818140105	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCC	2181	0.16541336276037816	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	1882	0.1427363359537055	No Hit
TTCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	1743	0.1321941729900684	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC	1635	0.12400313989601938	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG	1479	0.11217164764905975	No Hit
GCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	1475	0.11186827605298386	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	1463	0.11095816126475619	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1393	0.10564915833342814	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	1340	0.10162948468542261	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT	1324	0.10041599830111905	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGTCGA	30	2.1657452E-6	45.000004	29
ATCCTCG	20	7.033665E-4	45.0	1
CTTCGAC	20	7.033665E-4	45.0	28
ACAAACG	20	7.033665E-4	45.0	28
ATAGCGG	20	7.033665E-4	45.0	24
TACGCAA	20	7.033665E-4	45.0	14
GTCCGCG	35	1.2121018E-7	45.0	1
CGACTAT	20	7.033665E-4	45.0	24
CGTTTTT	13915	0.0	44.143013	1
TCTACGG	100	0.0	42.749996	2
CGTTTAT	185	0.0	42.567566	1
CGTTATT	390	0.0	40.961536	1
TGCCGAA	45	1.9286745E-8	40.0	34
CGACTCC	40	3.4587356E-7	39.375	28
TCCTTCG	40	3.4587356E-7	39.375	1
AGGGCGA	280	0.0	39.375	6
GTTGCAC	40	3.4587356E-7	39.375	34
GTTTTTT	15800	0.0	38.848103	2
ACTGCGG	35	6.2489908E-6	38.571426	2
TAGCGCG	35	6.2489908E-6	38.571426	1