##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933121.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 963308 Sequences flagged as poor quality 0 Sequence length 52 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48234105810395 33.0 31.0 34.0 31.0 34.0 2 32.82901315051884 34.0 31.0 34.0 31.0 34.0 3 32.76205533432713 34.0 31.0 34.0 31.0 34.0 4 36.29183708637321 37.0 37.0 37.0 35.0 37.0 5 36.23068011477118 37.0 37.0 37.0 35.0 37.0 6 36.32347909495198 37.0 37.0 37.0 35.0 37.0 7 36.53135030540596 37.0 37.0 37.0 35.0 37.0 8 36.46107579299663 37.0 37.0 37.0 35.0 37.0 9 38.310260062202325 39.0 39.0 39.0 37.0 39.0 10 38.033177343072 39.0 39.0 39.0 35.0 39.0 11 37.726236053266454 39.0 38.0 39.0 35.0 39.0 12 37.48996997844926 39.0 37.0 39.0 35.0 39.0 13 37.45504968296744 39.0 37.0 39.0 35.0 39.0 14 38.5471552193068 41.0 38.0 41.0 33.0 41.0 15 38.7464933333887 41.0 38.0 41.0 34.0 41.0 16 38.91129109277614 41.0 38.0 41.0 35.0 41.0 17 38.931282621965146 41.0 38.0 41.0 35.0 41.0 18 38.768208091285445 40.0 38.0 41.0 35.0 41.0 19 38.610466226793505 40.0 37.0 41.0 35.0 41.0 20 38.3867828358116 40.0 35.0 41.0 35.0 41.0 21 38.32165724773385 40.0 35.0 41.0 35.0 41.0 22 38.260675713271354 40.0 35.0 41.0 35.0 41.0 23 38.23132061604388 40.0 35.0 41.0 35.0 41.0 24 38.14444082266523 40.0 35.0 41.0 35.0 41.0 25 37.99713591084056 40.0 35.0 41.0 34.0 41.0 26 37.871014255046155 40.0 35.0 41.0 34.0 41.0 27 37.74710269197391 40.0 35.0 41.0 34.0 41.0 28 37.68044592176126 39.0 35.0 41.0 34.0 41.0 29 37.57421821473506 39.0 35.0 41.0 34.0 41.0 30 37.49342889293975 39.0 35.0 41.0 34.0 41.0 31 37.33994838618593 39.0 35.0 41.0 34.0 41.0 32 37.16890651795687 39.0 35.0 41.0 33.0 41.0 33 36.954098792909434 39.0 35.0 41.0 33.0 41.0 34 36.72772052137011 39.0 35.0 41.0 33.0 41.0 35 36.60963056467921 39.0 35.0 41.0 33.0 41.0 36 36.50329904869471 39.0 35.0 41.0 33.0 41.0 37 36.386645807986646 39.0 35.0 41.0 32.0 41.0 38 36.357303167834175 39.0 35.0 41.0 32.0 41.0 39 36.29361118147052 39.0 35.0 41.0 32.0 41.0 40 36.21486066761617 38.0 35.0 41.0 31.0 41.0 41 36.09528935709036 38.0 35.0 41.0 31.0 41.0 42 36.06703463482085 38.0 35.0 41.0 31.0 41.0 43 35.99704974940517 38.0 35.0 41.0 31.0 41.0 44 35.94671693788487 38.0 35.0 41.0 31.0 41.0 45 35.876918908594135 38.0 35.0 41.0 31.0 41.0 46 35.81725990026035 38.0 35.0 41.0 31.0 41.0 47 35.72540246733132 37.0 35.0 41.0 31.0 41.0 48 35.62568669625914 37.0 35.0 41.0 30.0 41.0 49 35.580963720845254 37.0 35.0 41.0 30.0 41.0 50 35.481416120285516 37.0 35.0 40.0 30.0 41.0 51 35.412944769481825 37.0 35.0 40.0 30.0 41.0 52 35.21410182413101 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 0.0 14 7.0 15 22.0 16 34.0 17 82.0 18 174.0 19 319.0 20 579.0 21 967.0 22 1497.0 23 2817.0 24 4820.0 25 8326.0 26 10806.0 27 11510.0 28 11125.0 29 11275.0 30 12580.0 31 14775.0 32 18971.0 33 26064.0 34 58078.0 35 95867.0 36 109379.0 37 90968.0 38 103371.0 39 364232.0 40 4660.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.2801222454293 22.677793602876754 25.10661180017191 19.935472351522048 2 40.841039418337644 22.32972216570401 24.41098797061791 12.418250445340432 3 27.621799050770885 22.81710522491249 36.92453503967578 12.636560684640841 4 24.525904487453648 26.13743475606971 35.71474543967246 13.621915316804179 5 22.915931353212056 30.55232594351962 32.799997508585 13.73174519468332 6 24.064058431986446 35.89205114044521 29.696732509228617 10.34715791833972 7 79.09785862880823 1.486336664908835 15.475009031379372 3.940795674903561 8 76.32813181246289 1.9889796409870986 16.343786203374204 5.339102343175807 9 70.98944470512028 3.8271248655673986 19.277115937996985 5.906314491315342 10 40.63965003923979 26.095703554833964 22.377889522354224 10.886756883572025 11 24.80411249569193 22.342075431741456 36.83536314449792 16.018448928068697 12 24.451162037479186 19.367741158591024 36.316629779883485 19.864467024046306 13 23.02482695046652 21.99815635290063 39.059573884987984 15.917442811644875 14 14.787482300572611 25.52859521565273 39.759350072873886 19.92457241090077 15 11.570338873963468 31.159193113728946 40.358431571210865 16.91203644109672 16 19.230920951554438 30.62810648307706 36.187802862635834 13.953169702732668 17 18.54007233408214 31.75827461206592 31.482869445701688 18.21878360815025 18 15.829412815008284 31.538511047349342 35.302935302104835 17.329140835537544 19 15.917754238519768 34.17048337603342 30.650321600152807 19.261440785294006 20 13.878323443799905 39.33352572593605 28.709509315815918 18.078641514448133 21 16.59386198391376 35.29172393460866 33.27326254946497 14.841151532012606 22 15.296976667898532 31.33836737575106 33.60171409351941 19.762941862830996 23 14.609449937091771 32.31302968520971 33.036785742462435 20.04073463523608 24 15.745638985661905 33.013532535803705 33.775594098668336 17.465234379866047 25 18.241310152100887 31.654984698559545 31.801043902884647 18.302661246454925 26 15.284000548111301 35.0806803223891 29.290631864367366 20.344687265132233 27 18.333284889152797 32.52043998388885 31.506330270277005 17.639944856681353 28 16.37856220440399 33.966602581936414 28.916296760745265 20.73853845291433 29 16.60320479016057 32.32206106458163 29.469287081597994 21.605447063659806 30 19.8162996673961 31.70284062833486 29.408455032035448 19.072404672233596 31 17.592088926906037 32.399087311638645 31.38238237406935 18.626441387385967 32 19.71799258388802 31.790455389138263 30.687173780348548 17.80437824662517 33 19.874328875084604 32.56310546574927 29.448732907855018 18.113832751311108 34 15.400058963488314 31.021957670859162 34.051310691907474 19.526672673745054 35 16.900928882558848 32.65186212509394 30.798768410518758 19.64844058182845 36 18.74675597005319 32.96339280894584 27.670381643254288 20.61946957774668 37 15.659373741316381 34.59693057672105 30.8401881848796 18.90350749708297 38 16.818296951753748 32.74238353672968 30.361109842334955 20.07820966918161 39 16.07367529388316 34.62246758046233 27.789450518421937 21.514406607232576 40 20.019972843576507 31.549618605887215 30.232075307170707 18.198333243365568 41 15.921179934143598 31.917932789928038 29.32385073102268 22.83703654490568 42 15.93706270476317 34.31280545785979 30.446856041888992 19.303275795488048 43 16.85764054694864 33.838917563230034 31.970979167618246 17.332462722203076 44 19.36649545109145 32.74331781735437 28.536355973375077 19.353830758179107 45 17.40762040801073 31.96070208074676 27.641730370764073 22.989947140478435 46 19.015205936211473 31.167809257267663 27.918485053586185 21.89849975293468 47 17.141973283726493 30.774373305318758 30.406681975027716 21.676971435927033 48 15.941734107886575 32.328497219996095 29.86334588729669 21.86642278482064 49 19.590722801014838 30.02300406515881 29.835109850639668 20.551163283186686 50 16.525763307270363 29.946289244976686 31.737720438322945 21.790227009430005 51 15.138979433369181 30.91129732131364 30.21120970655284 23.73851353876434 52 15.513625963866179 31.31438750638425 31.826165670792726 21.34582085895684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1247.0 1 1673.5 2 2100.0 3 27534.5 4 52969.0 5 28860.5 6 4752.0 7 5780.0 8 6808.0 9 10553.0 10 14298.0 11 18352.0 12 22406.0 13 23550.5 14 23195.5 15 21696.0 16 19286.5 17 16877.0 18 14886.5 19 12896.0 20 12002.5 21 11109.0 22 10442.0 23 9775.0 24 9229.0 25 8683.0 26 9077.5 27 9472.0 28 10210.0 29 10948.0 30 11040.0 31 11132.0 32 12156.5 33 13181.0 34 15064.0 35 16947.0 36 18565.5 37 20184.0 38 21634.0 39 26481.0 40 29878.0 41 35988.0 42 42098.0 43 55658.0 44 69218.0 45 83011.5 46 96805.0 47 94860.5 48 92916.0 49 87350.0 50 81784.0 51 66628.0 52 51472.0 53 45159.0 54 38846.0 55 35260.5 56 31675.0 57 30484.5 58 29294.0 59 29525.5 60 29757.0 61 23383.0 62 17009.0 63 14646.5 64 10406.0 65 8528.0 66 6988.5 67 5449.0 68 4792.0 69 4135.0 70 3359.0 71 2583.0 72 2191.0 73 1799.0 74 1388.5 75 978.0 76 845.0 77 712.0 78 543.0 79 374.0 80 293.5 81 213.0 82 181.0 83 149.0 84 87.0 85 25.0 86 41.5 87 58.0 88 32.0 89 4.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 963308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.258392370586417 #Duplication Level Percentage of deduplicated Percentage of total 1 68.38000158310349 20.006889166197624 2 11.940262281572934 6.9870575768394865 3 5.792346011016141 5.0842419700953405 4 3.3276435260344837 3.8944599981663455 5 2.0897566565632024 3.0571460108385495 6 1.4062606656722882 2.4686955798937116 7 0.9910496804684581 2.0297564286923304 8 0.7077217029579896 1.6565439419459576 9 0.5567662116008548 1.466107584993248 >10 4.081827884750385 24.25270860751651 >50 0.528038026504928 10.678311585561872 >100 0.18978031468464968 7.877494580892547 >500 0.0021363637675565587 0.4170229952299479 >1k 0.005340909418891398 3.6734069035231562 >5k 7.121212558521864E-4 1.2993032217106948 >10k+ 3.560606279260932E-4 5.150853847902652 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49443 5.132626325121352 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 7037 0.730503639542078 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 5435 0.5642016883488978 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 4522 0.4694241094229468 No Hit CGTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 4152 0.43101479485273664 No Hit CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 3779 0.3922940534076329 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 3587 0.3723627334144427 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 2597 0.2695918646995561 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCTT 2566 0.2663737869923223 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 2333 0.24218629970891967 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT 2163 0.2245387767982826 No Hit CGTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 1880 0.19516084159998673 No Hit GGGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 1565 0.16246101973615915 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC 1533 0.15913913307062746 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 1422 0.14761633869956442 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGT 1132 0.11751174079318348 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC 1016 0.10546990163063112 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1014 0.10526228371403538 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 971 0.10079849850722718 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.27218708865700275 0.0 2 0.0 0.0 0.0 0.8046232357667538 0.0 3 0.0 0.0 0.0 1.4910080680322388 0.0 4 0.0 0.0 0.0 2.1601606132202784 0.0 5 0.0 0.0 0.0 4.119139465259294 0.0 6 0.0 0.0 0.0 6.891150078687191 0.0 7 0.0 0.0 0.0 9.265676190792561 0.0 8 0.0 0.0 0.0 12.7163897735719 0.0 9 0.0 0.0 0.0 14.81032027139814 0.0 10 0.0 0.0 0.0 16.43108953730271 0.0 11 1.0380895829786528E-4 0.0 0.0 18.441661441615764 0.0 12 1.0380895829786528E-4 0.0 0.0 19.584494263516966 0.0 13 1.0380895829786528E-4 0.0 0.0 20.140287426243734 0.0 14 1.0380895829786528E-4 0.0 0.0 20.598915404003705 0.0 15 1.0380895829786528E-4 0.0 0.0 20.974288597208783 0.0 16 1.0380895829786528E-4 0.0 0.0 21.503402857653004 0.0 17 1.0380895829786528E-4 0.0 0.0 22.12646422535679 0.0 18 1.0380895829786528E-4 0.0 0.0 22.781913988049514 0.0 19 1.0380895829786528E-4 0.0 0.0 23.207634526029057 0.0 20 1.0380895829786528E-4 0.0 0.0 23.695432821070728 0.0 21 1.0380895829786528E-4 0.0 0.0 24.164234076743888 0.0 22 1.0380895829786528E-4 0.0 0.0 24.669057040946406 0.0 23 1.0380895829786528E-4 0.0 0.0 25.19983224472339 0.0 24 1.0380895829786528E-4 0.0 0.0 25.581745402301237 0.0 25 1.0380895829786528E-4 0.0 0.0 25.94144344280334 0.0 26 1.0380895829786528E-4 0.0 0.0 26.272386401856934 0.0 27 1.0380895829786528E-4 0.0 0.0 26.661047141724143 0.0 28 1.0380895829786528E-4 0.0 0.0 26.98835678723731 0.0 29 1.0380895829786528E-4 0.0 0.0 27.391135545433027 0.0 30 1.0380895829786528E-4 0.0 0.0 28.15060188434021 0.0 31 1.0380895829786528E-4 0.0 0.0 28.58307000460912 0.0 32 1.0380895829786528E-4 0.0 0.0 28.948373728859305 0.0 33 1.0380895829786528E-4 0.0 0.0 29.303400366238005 0.0 34 2.0761791659573055E-4 0.0 0.0 29.6879087477733 0.0 35 2.0761791659573055E-4 0.0 0.0 30.051447719732423 6.228537497871917E-4 36 2.0761791659573055E-4 0.0 0.0 30.391733485032823 6.228537497871917E-4 37 2.0761791659573055E-4 0.0 0.0 30.72703642033493 6.228537497871917E-4 38 2.0761791659573055E-4 0.0 0.0 31.109987667495755 6.228537497871917E-4 39 2.0761791659573055E-4 0.0 0.0 32.07593002445739 6.228537497871917E-4 40 2.0761791659573055E-4 0.0 0.0 32.50704862826843 6.228537497871917E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 6.3109415E-4 46.000004 41 GTTTGCG 40 5.6097633E-9 46.000004 1 CGGGTAT 20 6.3109415E-4 46.000004 6 CGAACGT 20 6.3109415E-4 46.000004 38 ACACGAT 20 6.3109415E-4 46.000004 41 CCCTCCG 20 6.3109415E-4 46.000004 44 ATAGGCG 20 6.3109415E-4 46.000004 13 CGCGGGT 20 6.3109415E-4 46.000004 4 TAGCGTA 20 6.3109415E-4 46.000004 30 GTTAGCG 40 5.6097633E-9 46.000004 1 TAACGGA 20 6.3109415E-4 46.000004 38 CCATCGG 20 6.3109415E-4 46.000004 27 CATAGCG 20 6.3109415E-4 46.000004 1 CCATAGT 20 6.3109415E-4 46.000004 26 TGTTACG 20 6.3109415E-4 46.000004 1 GTTCCGT 20 6.3109415E-4 46.000004 22 CGTACGA 20 6.3109415E-4 46.000004 33 ACGTCGA 20 6.3109415E-4 46.000004 29 TTACGGC 20 6.3109415E-4 46.000004 27 CAGTCGA 20 6.3109415E-4 46.000004 44 >>END_MODULE