##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933120.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 872970 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40399670091756 33.0 31.0 34.0 31.0 34.0 2 32.77224532343609 34.0 31.0 34.0 31.0 34.0 3 32.8002966883169 34.0 31.0 34.0 31.0 34.0 4 36.27469099739968 37.0 37.0 37.0 35.0 37.0 5 36.183371708077026 37.0 37.0 37.0 35.0 37.0 6 36.2656288303149 37.0 37.0 37.0 35.0 37.0 7 36.498310365762855 37.0 37.0 37.0 35.0 37.0 8 36.43288543707115 37.0 37.0 37.0 35.0 37.0 9 38.25204760759247 39.0 39.0 39.0 37.0 39.0 10 37.954064859044415 39.0 38.0 39.0 35.0 39.0 11 37.63392785548186 39.0 37.0 39.0 35.0 39.0 12 37.29792890935542 39.0 37.0 39.0 35.0 39.0 13 37.206417173556936 39.0 37.0 39.0 34.0 39.0 14 38.073219010962575 40.0 37.0 41.0 33.0 41.0 15 38.338985303045924 40.0 37.0 41.0 33.0 41.0 16 38.5588725843958 41.0 37.0 41.0 34.0 41.0 17 38.596689462409934 40.0 37.0 41.0 35.0 41.0 18 38.560296459213944 40.0 37.0 41.0 35.0 41.0 19 38.49728856661741 40.0 37.0 41.0 35.0 41.0 20 38.33113509055294 40.0 35.0 41.0 34.0 41.0 21 38.285639827256375 40.0 35.0 41.0 34.0 41.0 22 38.2501036690837 40.0 35.0 41.0 34.0 41.0 23 38.22705934911853 40.0 35.0 41.0 34.0 41.0 24 38.14284797873925 40.0 35.0 41.0 34.0 41.0 25 38.00239412580043 40.0 35.0 41.0 34.0 41.0 26 37.88705912001558 40.0 35.0 41.0 34.0 41.0 27 37.796975841094195 40.0 35.0 41.0 34.0 41.0 28 37.771036805388505 40.0 35.0 41.0 34.0 41.0 29 37.70988350115124 40.0 35.0 41.0 34.0 41.0 30 37.666640319827714 40.0 35.0 41.0 34.0 41.0 31 37.5452707424081 40.0 35.0 41.0 34.0 41.0 32 37.50131505091813 40.0 35.0 41.0 34.0 41.0 33 37.36881107025442 40.0 35.0 41.0 33.0 41.0 34 37.20767265770874 40.0 35.0 41.0 33.0 41.0 35 37.16862778789649 40.0 35.0 41.0 33.0 41.0 36 37.0842892653814 40.0 35.0 41.0 33.0 41.0 37 36.957752270982965 39.0 35.0 41.0 33.0 41.0 38 36.92297100702201 39.0 35.0 41.0 33.0 41.0 39 36.883313286825434 39.0 35.0 41.0 33.0 41.0 40 36.82846260467141 39.0 35.0 41.0 33.0 41.0 41 36.7300857990538 39.0 35.0 41.0 33.0 41.0 42 36.733131722739614 39.0 35.0 41.0 32.0 41.0 43 36.683477095432835 39.0 35.0 41.0 32.0 41.0 44 36.64684124311259 39.0 35.0 41.0 32.0 41.0 45 36.58772924613675 39.0 35.0 41.0 32.0 41.0 46 36.535847738181154 39.0 35.0 41.0 32.0 41.0 47 36.449852801356286 38.0 35.0 41.0 32.0 41.0 48 36.34750449614534 38.0 35.0 41.0 31.0 41.0 49 36.30261864668889 38.0 35.0 41.0 31.0 41.0 50 36.16998293183042 38.0 35.0 41.0 31.0 41.0 51 36.10864634523523 38.0 35.0 41.0 31.0 41.0 52 35.855296287386736 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 4.0 14 9.0 15 13.0 16 46.0 17 87.0 18 162.0 19 308.0 20 548.0 21 837.0 22 1340.0 23 2074.0 24 3337.0 25 5071.0 26 6646.0 27 7629.0 28 8467.0 29 9708.0 30 11609.0 31 14423.0 32 18224.0 33 25076.0 34 59791.0 35 95377.0 36 68208.0 37 67840.0 38 96758.0 39 366497.0 40 2874.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.908908668110016 23.7436567121436 26.890271143338257 13.457163476408123 2 35.59331935805354 23.94228896754757 26.77033575036943 13.694055924029463 3 30.763829226663002 23.91777495217476 31.205310606320953 14.11308521484129 4 27.09944213432306 27.791905792868025 30.749281189502504 14.359370883306413 5 24.45456315795503 32.048867658682425 28.244269562527926 15.252299620834622 6 26.052098010240904 39.09492880625909 24.891233375717377 9.961739807782626 7 85.55712109236285 1.5828722636516717 9.581543466556697 3.2784631774287774 8 82.78188253891886 1.8883810440221316 10.402762981545758 4.926973435513248 9 77.11696850979988 3.741480234143212 13.359451069338007 5.7821001867189015 10 45.94350321316883 25.063747895116673 17.423622804907385 11.569126086807106 11 29.271338075764348 23.10560500360837 30.947798893432765 16.67525802719452 12 29.465961029588644 18.858609116006278 32.36835171884486 19.307078135560214 13 27.00906102157004 22.252769281876812 34.400838516787516 16.337331179765627 14 16.396210637249848 25.356312358958498 37.52660457976792 20.720872424023735 15 13.495881874520316 30.435181048604193 38.84005177726612 17.228885299609377 16 24.05603858093634 28.5186203420507 31.969254384457656 15.4560866925553 17 21.96936893593136 27.904968097414574 27.787323733919838 22.338339232734228 18 19.270879869869525 27.39452673058639 34.05752775009451 19.27706564944958 19 19.498837302541897 30.741491689290584 28.393186478344045 21.366484529823477 20 16.285210259229984 37.657995120107216 26.91661798229034 19.140176638372452 21 19.11096601257775 31.982771458354815 32.51944511266138 16.386817416406064 22 17.398650583639757 27.200820188551727 33.31615061227763 22.084378615530888 23 17.768766395179675 28.771664547464404 32.57064962140738 20.888919435948544 24 18.61301075638338 31.119855206937235 30.898885414160855 19.36824862251853 25 20.955817496592093 29.33663241577603 28.886903330011343 20.820646757620537 26 16.19173625668694 32.894257534623186 26.53905632495962 24.374949883730253 27 20.05521381032567 30.152926217395787 29.769636986379826 20.022222985898715 28 15.942472249905496 32.32814415157451 26.324043208815883 25.40534038970411 29 17.962931143109156 32.27109751766957 25.92242574200717 23.843545597214106 30 22.30947226136064 31.301075638338087 24.493167004593513 21.896285095707757 31 19.080724423519708 31.381719875826203 26.430690630834963 23.106865069819126 32 22.48725614855035 30.872538575208768 22.426314764539445 24.213890511701432 33 21.674857097036554 30.868071067734288 24.076085088834667 23.38098674639449 34 15.637994432798378 29.669748101309324 28.68861472902849 26.003642736863807 35 17.083290376530694 33.25016896342372 25.42882344181358 24.237717218232014 36 22.338682887155343 30.907362223215003 23.366438709233993 23.38751618039566 37 17.81538884497749 33.37503006976185 25.728375545551398 23.081205539709266 38 19.68670171941762 29.018866627719163 28.31208403496111 22.982347617902104 39 19.3262082316689 29.895987261876122 25.704090633125997 25.07371387332898 40 23.25635474300377 28.460886399303526 28.57841621132456 19.704342646368143 41 18.615874543226 27.85571096372155 27.07973928084585 26.448675212206606 42 18.926881794334285 29.247511369233763 29.865287466923263 21.96031936950869 43 18.79423118778423 29.5718065912918 30.01512079452902 21.61884142639495 44 21.427311362360676 28.055145079441445 26.68740048340722 23.83014307479066 45 18.296619586010973 28.64199227923067 25.146568610605176 27.914819524153177 46 20.904498436372386 27.990194393850874 27.067940479054265 24.037366690722475 47 17.29188861014697 28.035327674490535 30.748135674765454 23.924648040597045 48 17.08729967811036 30.663023929802858 28.326288417700496 23.92338797438629 49 23.230809764367617 26.895998717023495 27.714010790748823 22.159180727860065 50 18.932494816545812 26.59644661328568 29.122535711421925 25.34852285874658 51 18.315406027698547 27.18214829833786 26.859800451332806 27.64264522263079 52 18.172102134093958 28.826878357790076 29.689336403312826 23.311683104803144 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 872.0 1 1664.0 2 2456.0 3 10617.0 4 18778.0 5 10531.0 6 2284.0 7 2884.5 8 3485.0 9 5408.0 10 7331.0 11 9523.5 12 11716.0 13 12260.0 14 11900.0 15 10996.0 16 9619.5 17 8243.0 18 7316.5 19 6390.0 20 5723.5 21 5057.0 22 5139.5 23 5222.0 24 4774.5 25 4327.0 26 5380.0 27 6433.0 28 7554.5 29 8676.0 30 9599.5 31 10523.0 32 12008.5 33 13494.0 34 15268.5 35 17043.0 36 17217.0 37 17391.0 38 20029.0 39 25010.0 40 27353.0 41 30535.5 42 33718.0 43 41020.5 44 48323.0 45 58487.5 46 68652.0 47 79810.5 48 90969.0 49 94982.0 50 98995.0 51 88261.5 52 77528.0 53 66813.5 54 56099.0 55 49215.0 56 42331.0 57 39779.5 58 37228.0 59 37622.0 60 38016.0 61 28820.5 62 19625.0 63 16621.5 64 11312.5 65 9007.0 66 7165.5 67 5324.0 68 4492.5 69 3661.0 70 3008.0 71 2355.0 72 2041.0 73 1727.0 74 1469.5 75 1212.0 76 883.0 77 554.0 78 370.5 79 187.0 80 158.5 81 130.0 82 108.5 83 87.0 84 61.0 85 35.0 86 19.5 87 4.0 88 5.0 89 19.0 90 32.0 91 16.5 92 1.0 93 1.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 872970.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.572042296518475 #Duplication Level Percentage of deduplicated Percentage of total 1 69.11493073293448 17.674099320235452 2 12.56526164734848 6.426388046256334 3 5.369619863861519 4.119364388246776 4 2.74702536917308 2.809881957204131 5 1.7280799913008844 2.209526731465675 6 1.118574080432414 1.7162534217964167 7 0.7655921660195032 1.370442867593375 8 0.6231604501589123 1.2748388311184962 9 0.49342732913597986 1.135615007783108 >10 4.010043760911974 22.462932951579457 >50 1.1029268190649761 20.381559709404574 >100 0.34789103973266683 11.732764216102613 >500 0.008528941619252477 1.5181078833573727 >1k 0.004040024977540646 2.125121455167867 >5k 4.48891664171183E-4 1.1165697830939254 >10k+ 4.48891664171183E-4 1.9265334295944638 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16783 1.9225173831861346 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 9727 1.1142421847257065 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 4994 0.5720700596813179 No Hit CTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCTGCTT 2419 0.27710001489169156 RNA PCR Primer, Index 16 (96% over 25bp) GCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCTGCT 2249 0.257626264361891 RNA PCR Primer, Index 14 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCTGCT 1927 0.22074068982897466 RNA PCR Primer, Index 16 (95% over 24bp) GGGGCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCT 1480 0.16953618108296964 RNA PCR Primer, Index 16 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCG 1467 0.16804701192480842 No Hit CGCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCTGC 1458 0.16701604866146602 RNA PCR Primer, Index 16 (95% over 23bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1402 0.16060116613400233 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1117 0.1279539961281602 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCAACCCATGTCG 981 0.11237499570431973 No Hit CGTTCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCT 972 0.11134403244097736 RNA PCR Primer, Index 14 (95% over 21bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 942 0.10790748822983609 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTC 914 0.10470004696610423 No Hit TCTGTCTCTTATACACATCTGACGCAACCCATGTCGTATGCCGTCTTCTGCT 904 0.10355453222905713 RNA PCR Primer, Index 14 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.28500406657731653 0.0 2 0.0 0.0 0.0 0.9591394893295302 0.0 3 0.0 0.0 0.0 1.5282312106945255 0.0 4 0.0 0.0 0.0 2.2281407150302988 0.0 5 0.0 0.0 0.0 4.22477290170338 0.0 6 0.0 0.0 0.0 6.155308888048845 0.0 7 0.0 0.0 0.0 7.7621224097048005 0.0 8 0.0 0.0 0.0 10.639197223272278 0.0 9 0.0 0.0 0.0 12.195378993550753 0.0 10 0.0 0.0 0.0 13.789477301625485 0.0 11 0.0 0.0 0.0 16.096200327617215 0.0 12 1.1455147370470922E-4 0.0 0.0 17.38478985532149 0.0 13 1.1455147370470922E-4 0.0 0.0 17.93601154678855 0.0 14 1.1455147370470922E-4 0.0 0.0 18.274740254533373 0.0 15 1.1455147370470922E-4 0.0 0.0 18.627673345017584 0.0 16 1.1455147370470922E-4 0.0 0.0 19.24544944270708 0.0 17 1.1455147370470922E-4 0.0 0.0 20.021306574109076 0.0 18 1.1455147370470922E-4 0.0 0.0 20.82121951498906 0.0 19 2.2910294740941843E-4 0.0 0.0 21.32398593307903 0.0 20 2.2910294740941843E-4 0.0 0.0 21.88082064675762 0.0 21 2.2910294740941843E-4 0.0 0.0 22.435020676541004 0.0 22 2.2910294740941843E-4 0.0 0.0 23.059440759705375 0.0 23 2.2910294740941843E-4 0.0 0.0 23.635634672440062 0.0 24 2.2910294740941843E-4 0.0 0.0 24.054549411778183 0.0 25 2.2910294740941843E-4 0.0 0.0 24.468194783325888 0.0 26 2.2910294740941843E-4 0.0 0.0 24.84380906560363 0.0 27 2.2910294740941843E-4 0.0 0.0 25.364101859170418 0.0 28 2.2910294740941843E-4 0.0 0.0 25.753691421240134 0.0 29 2.2910294740941843E-4 0.0 0.0 26.2490119935393 0.0 30 2.2910294740941843E-4 0.0 0.0 27.246526226559904 0.0 31 2.2910294740941843E-4 0.0 0.0 27.725809592540408 0.0 32 2.2910294740941843E-4 0.0 0.0 28.08779224944729 0.0 33 2.2910294740941843E-4 0.0 0.0 28.489867922150818 0.0 34 2.2910294740941843E-4 0.0 0.0 28.944637272758513 0.0 35 2.2910294740941843E-4 0.0 0.0 29.375694468309334 0.0 36 2.2910294740941843E-4 0.0 0.0 29.738364434058443 0.0 37 2.2910294740941843E-4 0.0 0.0 30.1483441584476 0.0 38 2.2910294740941843E-4 0.0 0.0 30.64045728948303 0.0 39 2.2910294740941843E-4 0.0 0.0 32.1528803968063 0.0 40 2.2910294740941843E-4 0.0 0.0 32.58668682772604 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 70 0.0 46.000004 2 TTCGTCA 35 1.01919795E-7 46.000004 28 GAGCGAC 70 0.0 46.000004 18 TCTCGCG 35 1.01919795E-7 46.000004 32 TCGTCAC 35 1.01919795E-7 46.000004 29 AGCGATA 35 1.01919795E-7 46.000004 34 CGATACG 35 1.01919795E-7 46.000004 36 ACAACGC 30 1.8608862E-6 46.0 18 CTATGCG 30 1.8608862E-6 46.0 1 AACCGAT 20 6.310617E-4 46.0 33 GCGACTA 30 1.8608862E-6 46.0 40 CGTATTG 25 3.416476E-5 46.0 19 CGTATCG 20 6.310617E-4 46.0 25 CAACGTT 40 5.6079443E-9 46.0 14 CGCGGGT 20 6.310617E-4 46.0 4 ACGTTAG 25 3.416476E-5 46.0 1 TAGGTTA 20 6.310617E-4 46.0 39 TTTCGCG 20 6.310617E-4 46.0 1 TTTCGCA 40 5.6079443E-9 46.0 14 TAGCGTA 20 6.310617E-4 46.0 16 >>END_MODULE