##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933115.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 889954 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.655623773813026 33.0 31.0 34.0 31.0 34.0 2 32.99516042402192 34.0 31.0 34.0 31.0 34.0 3 33.0537263723743 34.0 33.0 34.0 31.0 34.0 4 36.456360665832165 37.0 37.0 37.0 35.0 37.0 5 36.426063594298135 37.0 37.0 37.0 35.0 37.0 6 36.569509210588414 37.0 37.0 37.0 35.0 37.0 7 36.629472983996926 37.0 37.0 37.0 35.0 37.0 8 36.48585769601575 37.0 37.0 37.0 35.0 37.0 9 38.15129770752196 39.0 39.0 39.0 37.0 39.0 10 37.949706389319 39.0 38.0 39.0 35.0 39.0 11 37.31074976908919 39.0 35.0 39.0 35.0 39.0 12 37.07498027987963 39.0 35.0 39.0 34.0 39.0 13 37.11785440595806 39.0 35.0 39.0 35.0 39.0 14 38.44589383271495 40.0 35.0 41.0 35.0 41.0 15 38.520822424529804 40.0 35.0 41.0 35.0 41.0 16 38.5283913550588 40.0 35.0 41.0 35.0 41.0 17 38.56428759239242 40.0 36.0 41.0 35.0 41.0 18 38.50058879447702 40.0 36.0 41.0 35.0 41.0 19 38.388139162248834 40.0 35.0 41.0 35.0 41.0 20 38.27753456920245 40.0 35.0 41.0 35.0 41.0 21 38.222982311445314 40.0 35.0 41.0 35.0 41.0 22 38.19642812999324 40.0 35.0 41.0 35.0 41.0 23 38.16266795811919 40.0 35.0 41.0 35.0 41.0 24 38.129903343318865 40.0 35.0 41.0 35.0 41.0 25 38.08123565937116 40.0 35.0 41.0 35.0 41.0 26 38.01895378862278 40.0 35.0 41.0 35.0 41.0 27 38.03362645709778 40.0 35.0 41.0 35.0 41.0 28 38.07067668666021 40.0 35.0 41.0 35.0 41.0 29 38.05791310562119 40.0 35.0 41.0 35.0 41.0 30 37.952127862788416 40.0 35.0 41.0 35.0 41.0 31 37.87545648426773 40.0 35.0 41.0 35.0 41.0 32 37.78215728003919 40.0 35.0 41.0 35.0 41.0 33 37.65842279488603 40.0 35.0 41.0 34.0 41.0 34 37.55896484537403 40.0 35.0 41.0 34.0 41.0 35 37.451308719327066 40.0 35.0 41.0 34.0 41.0 36 37.35551725145345 40.0 35.0 41.0 34.0 41.0 37 37.27709184969111 40.0 35.0 41.0 33.0 41.0 38 37.33269809450825 39.0 35.0 41.0 34.0 41.0 39 37.2215642606247 39.0 35.0 41.0 33.0 41.0 40 37.29356798216537 39.0 35.0 41.0 34.0 41.0 41 37.27590302420125 39.0 35.0 41.0 34.0 41.0 42 37.21719549549752 39.0 35.0 41.0 34.0 41.0 43 37.12230407414316 39.0 35.0 41.0 34.0 41.0 44 37.05022619146607 39.0 35.0 41.0 34.0 41.0 45 37.012354571135134 39.0 35.0 41.0 34.0 41.0 46 36.95923721900233 39.0 35.0 41.0 33.0 41.0 47 36.90776489571371 39.0 35.0 41.0 33.0 41.0 48 36.90588165231012 39.0 35.0 41.0 34.0 41.0 49 36.808542913453955 39.0 35.0 41.0 33.0 41.0 50 36.703248707236554 38.0 35.0 41.0 33.0 41.0 51 36.59772415203482 38.0 35.0 41.0 33.0 41.0 52 36.41191454839239 38.0 35.0 40.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 5.0 15 8.0 16 17.0 17 41.0 18 77.0 19 174.0 20 295.0 21 447.0 22 814.0 23 1336.0 24 2244.0 25 3930.0 26 5479.0 27 6122.0 28 6328.0 29 6940.0 30 8204.0 31 10224.0 32 13824.0 33 19398.0 34 52265.0 35 165240.0 36 40922.0 37 52447.0 38 93513.0 39 396409.0 40 3248.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.422134177721542 23.637738579746816 26.973528968913 18.966598273618636 2 24.971852477768515 24.42968962440755 28.750699474354853 21.847758423469077 3 25.684361214175116 25.670652640473552 27.18016886266032 21.464817282691016 4 24.702175618065652 29.358258966193755 24.69857992660295 21.24098548913764 5 22.93174703411637 37.01292426350126 20.463754306402354 19.591574395980015 6 88.72559705333086 3.0359996134631677 6.171442568941766 2.0669607642642203 7 91.497200978927 1.7132346166206343 4.404834407171607 2.3847299972807585 8 84.09254860363569 4.628441470008562 7.488476932515613 3.790532993840131 9 48.15372479925929 30.166840083869506 11.256424489355629 10.423010627515579 10 39.23236481885581 19.948559139011678 27.717949467051106 13.101126575081409 11 36.54076502830483 22.199124898590263 25.064216802216745 16.19589327088816 12 19.182564492097345 38.89796551282426 27.140054429779514 14.779415565298882 13 15.672270701631769 40.523105688608624 28.855199257489712 14.949424352269894 14 14.63525081071606 25.51570081150262 44.16756371677637 15.681484661004951 15 15.669349202318323 21.780563939259782 44.58825961791283 17.96182724050906 16 16.6977169606519 22.028104823395367 28.414389957233745 32.85978825871899 17 19.90136568856368 24.887353728394952 33.92523658526171 21.28604399777966 18 24.965222921634155 27.242082175033765 28.416075437606885 19.376619465725195 19 26.483953103194096 24.488793802825764 27.218373084451557 21.808880009528583 20 19.29234544706805 29.800079554673616 29.941210444584776 20.96636455367356 21 20.62308838434346 24.583180703721766 27.8499787629473 26.94375214898748 22 16.293426401814028 30.970140029709402 25.77357930859348 26.962854259883095 23 16.509280254934524 26.33214750425303 38.91156172116761 18.247010519644835 24 16.66917615966668 26.52833741968686 35.349018039134606 21.453468381511854 25 15.630807884452455 34.53830197965288 28.592938511428677 21.237951624465985 26 15.794973672796573 33.22250363501934 30.64293210660326 20.339590585580826 27 16.270616234097492 29.04296177105783 37.09259130247181 17.593830692372865 28 15.496306550675653 25.28040775141187 35.147884047939556 24.075401649972918 29 18.57994907601966 29.190160390312307 32.40111286650771 19.828777667160324 30 26.685873651896614 26.514741211343505 27.711095180200324 19.088289956559553 31 26.97364133427121 27.164662443227407 27.52007407124413 18.341622151257255 32 25.31580283924787 27.886272773648972 27.084770673540433 19.713153713562722 33 18.682538648064956 26.21371441670019 31.195882034352334 23.907864900882515 34 19.11334743144028 27.383437795661347 30.973398625097477 22.529816147800897 35 28.597320760398855 23.267269993730014 28.38495023338285 19.750459012488285 36 19.270771298291823 31.350272036532225 30.718666358036483 18.66029030713947 37 19.55078577094996 31.278695303352755 26.961168779509954 22.209350146187333 38 19.14098930955982 31.29431408814388 27.730309656454153 21.834386945842144 39 23.148724540818964 26.800149221195703 26.492043408985182 23.55908282900015 40 16.097236486380197 24.966346575216246 31.222962085680834 27.713454852722723 41 20.9550156524944 26.287313726327426 26.00538904257973 26.752281578598446 42 21.93450448000683 25.4506412690993 27.514006341900814 25.100847908993053 43 21.43099530986995 29.290277924476992 28.77171179634004 20.50701496931302 44 18.228919696973104 35.11069111437221 25.055901765709237 21.604487422945457 45 21.404477085332502 29.77659519480782 27.683003840647945 21.135923879211735 46 21.857421844275095 27.34298626670592 27.00218213525643 23.797409753762555 47 21.927537827797842 24.65520689833407 31.92782997772919 21.4894252961389 48 21.08221323798758 23.068158578982732 30.910474024500147 24.93915415852954 49 20.482744051939765 29.76277425574805 28.3891077516366 21.365373940675585 50 18.779959413632614 30.07795908552577 26.97577627607719 24.166305224764425 51 20.275654696759606 24.72105299824485 30.975533566903458 24.027758738092082 52 22.99118830860921 24.402721938437267 30.313364510974722 22.2927252419788 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1748.0 1 1355.5 2 963.0 3 3035.0 4 5107.0 5 3323.5 6 1540.0 7 1738.0 8 1936.0 9 2426.0 10 2916.0 11 2977.0 12 3038.0 13 3061.0 14 3080.0 15 3076.0 16 3069.0 17 3062.0 18 2734.0 19 2406.0 20 2538.5 21 2671.0 22 2897.0 23 3123.0 24 3638.0 25 4153.0 26 4588.5 27 5024.0 28 6667.5 29 8311.0 30 8657.5 31 9004.0 32 11347.0 33 13690.0 34 15791.5 35 17893.0 36 20332.5 37 22772.0 38 25556.5 39 34169.0 40 39997.0 41 53205.0 42 66413.0 43 84103.5 44 101794.0 45 111666.5 46 121539.0 47 114773.5 48 108008.0 49 97086.0 50 86164.0 51 74003.5 52 61843.0 53 53701.5 54 45560.0 55 39994.0 56 34428.0 57 31021.0 58 27614.0 59 23198.0 60 18782.0 61 16169.5 62 13557.0 63 11123.5 64 6731.0 65 4772.0 66 3985.5 67 3199.0 68 2494.0 69 1789.0 70 1439.5 71 1090.0 72 774.5 73 459.0 74 305.5 75 152.0 76 116.5 77 81.0 78 56.5 79 32.0 80 71.5 81 111.0 82 61.0 83 11.0 84 9.0 85 7.0 86 4.5 87 2.0 88 1.5 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 889954.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.785283610748262 #Duplication Level Percentage of deduplicated Percentage of total 1 69.84561123655214 15.216064497543542 2 12.586207693469076 5.483882083720111 3 5.024857799768285 3.2840385681489788 4 2.623908644134194 2.286503759246294 5 1.5159249621990742 1.6512427617059833 6 0.9775017081737725 1.277709116553391 7 0.6772533435210861 1.0327909315454067 8 0.49202490134626753 0.85751216155031 9 0.35795562035096273 0.701834823846635 >10 3.7491547916534445 19.23050838316172 >50 1.285519330501911 20.1857448840223 >100 0.8573576226754958 26.941963917166024 >500 0.004136828094936048 0.5883838331633975 >1k 0.0025855175593350295 1.2618202786259267 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3829 0.4302469565842729 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCTT 2098 0.23574252152358438 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 1965 0.22079792888171748 No Hit GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 1717 0.1929313200457552 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1592 0.1788856502695645 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.24181025086689875 0.0 2 0.0 0.0 0.0 0.8117273477056117 0.0 3 0.0 0.0 0.0 1.3951282875294677 0.0 4 0.0 0.0 0.0 1.7743613714866162 0.0 5 0.0 0.0 0.0 3.619063457212395 0.0 6 0.0 0.0 0.0 3.9460466496021143 0.0 7 0.0 0.0 0.0 5.085094285772073 0.0 8 0.0 0.0 0.0 6.608206716302191 0.0 9 0.0 0.0 0.0 7.786245131770856 0.0 10 0.0 0.0 0.0 8.646064852790143 0.0 11 1.1236535820952544E-4 0.0 0.0 9.55397694712311 0.0 12 2.2473071641905087E-4 0.0 0.0 10.225921789216072 0.0 13 2.2473071641905087E-4 0.0 0.0 10.489755650292038 0.0 14 2.2473071641905087E-4 0.0 0.0 10.669652588785487 0.0 15 2.2473071641905087E-4 0.0 0.0 11.304067401236468 0.0 16 2.2473071641905087E-4 0.0 0.0 12.176696773091644 0.0 17 2.2473071641905087E-4 0.0 0.0 13.196075302768458 0.0 18 2.2473071641905087E-4 0.0 0.0 13.749924153383208 0.0 19 2.2473071641905087E-4 0.0 0.0 14.28242358593815 0.0 20 2.2473071641905087E-4 0.0 0.0 14.907961535090578 0.0 21 4.4946143283810174E-4 0.0 0.0 15.569905860302892 0.0 22 4.4946143283810174E-4 0.0 0.0 16.28556082673936 0.0 23 4.4946143283810174E-4 0.0 0.0 16.800418898055405 0.0 24 5.618267910476272E-4 0.0 0.0 17.183697134908098 0.0 25 5.618267910476272E-4 0.0 0.0 17.607876362149057 0.0 26 5.618267910476272E-4 0.0 0.0 17.996885232270433 0.0 27 5.618267910476272E-4 0.0 0.0 18.4070187897352 0.0 28 5.618267910476272E-4 0.0 0.0 18.850075397155358 0.0 29 5.618267910476272E-4 0.0 0.0 19.352460913710146 0.0 30 6.741921492571526E-4 0.0 0.0 19.835631954011106 0.0 31 6.741921492571526E-4 0.0 0.0 20.238686493908673 0.0 32 6.741921492571526E-4 0.0 0.0 20.645336725268947 0.0 33 6.741921492571526E-4 0.0 0.0 21.089067524838363 0.0 34 6.741921492571526E-4 0.0 0.0 21.594599271423018 0.0 35 7.865575074666781E-4 0.0 0.0 21.999226926335517 0.0 36 7.865575074666781E-4 0.0 0.0 22.433968497248173 0.0 37 7.865575074666781E-4 0.0 0.0 22.858934281996596 0.0 38 7.865575074666781E-4 0.0 0.0 23.28255168244651 0.0 39 7.865575074666781E-4 0.0 0.0 23.731563653851772 0.0 40 7.865575074666781E-4 0.0 0.0 24.1624848025853 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGG 55 1.8189894E-12 46.000004 1 TGATCGG 40 5.6097633E-9 46.0 1 AATCCGT 20 6.310682E-4 46.0 11 AATCCGA 20 6.310682E-4 46.0 12 CTCACCG 20 6.310682E-4 46.0 15 ACCGGTC 25 3.41653E-5 46.0 34 TCGCACC 20 6.310682E-4 46.0 43 CTCGTCC 30 1.8609262E-6 46.0 36 CGAGTGT 25 3.41653E-5 46.0 24 CGCGGCC 20 6.310682E-4 46.0 13 ACGTTCA 20 6.310682E-4 46.0 19 GCGCGTA 20 6.310682E-4 46.0 39 CGTGCAC 25 3.41653E-5 46.0 44 CGGCCGT 20 6.310682E-4 46.0 16 CGGCCCT 25 3.41653E-5 46.0 41 GCAACGC 20 6.310682E-4 46.0 8 GGCCGTA 20 6.310682E-4 46.0 8 GGCGTAA 25 3.41653E-5 46.0 7 GACCGGT 20 6.310682E-4 46.0 33 TAGCGCA 25 3.41653E-5 46.0 16 >>END_MODULE