SRR2933114.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933114.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2783794
Sequences flagged as poor quality	0
Sequence length	52
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	30800	1.1064037065961059	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	21388	0.7683039765155036	No Hit
GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	14537	0.5222009961944023	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	14360	0.5158427671013014	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	6879	0.24710880187255235	No Hit
TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	5329	0.19142939456008598	No Hit
GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTA	4334	0.1556868072853092	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA	4017	0.14429947043495317	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	10550	43.44929	1
AATGCGG	350	43.37143	1
ACGTAGG	405	42.02469	1
CTAACGG	350	41.4	1
CGCACTT	9440	41.346397	34
CCCGCAC	9610	41.332985	32
ACGGGAT	1505	40.956814	4
CCGCACT	9560	40.9477	33
CGACGGT	725	40.92414	27
CATGCGG	360	40.88889	1
ACCCGCA	9795	40.458397	31
CAACGCA	10280	40.272373	16
CTTACTG	9665	40.241074	38
TCAACGC	10320	40.22771	15
TACGGGA	1035	40.22222	3
GCTTATG	10190	40.221786	24
GCACTTA	9695	40.21145	35
CTTAATC	10575	40.171154	10
CGCAAGC	10340	40.127663	19
ATCAACG	10355	40.113953	14