##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933110.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 762541 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41297976108826 33.0 31.0 34.0 31.0 34.0 2 32.774814731273466 34.0 31.0 34.0 31.0 34.0 3 32.82396880954598 34.0 31.0 34.0 31.0 34.0 4 36.28643181153538 37.0 37.0 37.0 35.0 37.0 5 36.17787895995101 37.0 37.0 37.0 35.0 37.0 6 36.2753373261241 37.0 37.0 37.0 35.0 37.0 7 36.49328888545009 37.0 37.0 37.0 35.0 37.0 8 36.414719995383855 37.0 37.0 37.0 35.0 37.0 9 38.253498500408504 39.0 39.0 39.0 37.0 39.0 10 37.94115463955381 39.0 38.0 39.0 35.0 39.0 11 37.68620179111681 39.0 37.0 39.0 35.0 39.0 12 37.33207394749922 39.0 37.0 39.0 35.0 39.0 13 37.25455549275383 39.0 37.0 39.0 34.0 39.0 14 38.184923827046674 40.0 37.0 41.0 33.0 41.0 15 38.41159098330451 40.0 37.0 41.0 33.0 41.0 16 38.597474758734286 40.0 37.0 41.0 35.0 41.0 17 38.622660289741795 40.0 37.0 41.0 35.0 41.0 18 38.6088970953693 40.0 37.0 41.0 35.0 41.0 19 38.576248359104625 40.0 37.0 41.0 35.0 41.0 20 38.442471945770784 40.0 36.0 41.0 34.0 41.0 21 38.37497000161303 40.0 36.0 41.0 34.0 41.0 22 38.334006958314376 40.0 35.0 41.0 34.0 41.0 23 38.309357791908894 40.0 35.0 41.0 34.0 41.0 24 38.26380483147791 40.0 35.0 41.0 34.0 41.0 25 38.15090336126189 40.0 35.0 41.0 34.0 41.0 26 38.03429586081273 40.0 35.0 41.0 34.0 41.0 27 37.95482865839345 40.0 35.0 41.0 34.0 41.0 28 37.94731693115518 40.0 35.0 41.0 34.0 41.0 29 37.901774461963356 40.0 35.0 41.0 34.0 41.0 30 37.85337313010054 40.0 35.0 41.0 34.0 41.0 31 37.777058545048725 40.0 35.0 41.0 34.0 41.0 32 37.678560234793935 40.0 35.0 41.0 34.0 41.0 33 37.580895978052325 40.0 35.0 41.0 34.0 41.0 34 37.48319893618835 40.0 35.0 41.0 33.0 41.0 35 37.405089037835346 40.0 35.0 41.0 33.0 41.0 36 37.33195854386846 40.0 35.0 41.0 33.0 41.0 37 37.2294801197575 40.0 35.0 41.0 33.0 41.0 38 37.16327384363595 40.0 35.0 41.0 33.0 41.0 39 37.1417077901385 40.0 35.0 41.0 33.0 41.0 40 37.07815579752433 40.0 35.0 41.0 33.0 41.0 41 36.975360013428784 40.0 35.0 41.0 32.0 41.0 42 36.98835341312795 40.0 35.0 41.0 32.0 41.0 43 36.9279920686232 39.0 35.0 41.0 32.0 41.0 44 36.865843279246626 39.0 35.0 41.0 32.0 41.0 45 36.78137962417758 39.0 35.0 41.0 32.0 41.0 46 36.68657423010697 39.0 35.0 41.0 32.0 41.0 47 36.54097681305005 39.0 35.0 41.0 32.0 41.0 48 36.39228185763126 39.0 35.0 41.0 32.0 41.0 49 36.29809675807596 38.0 35.0 40.0 31.0 41.0 50 36.104344553276476 38.0 35.0 40.0 31.0 41.0 51 35.988161948013285 37.0 35.0 40.0 31.0 41.0 52 35.71229088009694 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 3.0 15 12.0 16 25.0 17 66.0 18 111.0 19 261.0 20 422.0 21 727.0 22 1142.0 23 1722.0 24 2685.0 25 4118.0 26 5502.0 27 6505.0 28 7431.0 29 8394.0 30 9927.0 31 12106.0 32 15373.0 33 20835.0 34 49369.0 35 83481.0 36 47257.0 37 53416.0 38 93888.0 39 336006.0 40 1754.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.14037540276523 23.038498913501044 26.725120354184234 12.096005329549493 2 36.24106769340927 22.82106798191835 26.943993831151374 13.993870493521005 3 31.23556634987496 24.42544073040007 29.377567894709923 14.961425025015048 4 28.132913508912967 28.11665208821558 28.443191907058115 15.30724249581334 5 24.439997324734016 31.53692719473445 28.517679705091265 15.505395775440272 6 26.4772648290387 38.49917578202353 24.871711816151524 10.15184757278625 7 85.97832772270606 1.866653727471703 8.89775107174565 3.2572674780765887 8 82.35504713844894 2.428197303489255 9.783605078284314 5.43315047977748 9 76.397465841181 4.294588749981968 12.814130650024063 6.493814758812968 10 43.36488136375618 24.895185963771127 19.308601111284506 12.431331561188186 11 29.672371715094663 23.474147619603407 29.180726019977943 17.67275464532399 12 29.324062574995967 19.366565207641294 31.74058837492017 19.56878384244257 13 26.895734131017218 23.81012955368957 34.12655844079204 15.167577874501173 14 17.50725534758131 26.732333081106457 35.635592053410896 20.124819517901333 15 14.397783201165575 29.008276276292026 38.51648632663686 18.07745419590553 16 23.262618010047984 26.797378763895974 33.34128918969603 16.59871403636001 17 21.015656863040807 26.451954714566167 27.994822573474735 24.537565848918288 18 18.67099605135986 25.136353323952417 36.30113003759798 19.891520587089744 19 19.427807816235454 28.211466662120465 29.92219434758262 22.43853117406146 20 17.607708962534474 34.90841803916117 27.83692942412277 19.646943574181584 21 20.482046211285688 30.127822635110768 32.46631984378545 16.923811309818095 22 18.90403270119246 26.05014025475351 31.53535350886051 23.51047353519352 23 18.023555454723088 26.659943530905224 32.0409000958637 23.275600918507987 24 20.020431688263322 28.00046161452302 31.22966502784768 20.749441669365975 25 21.375637506704557 26.66217291922664 29.605227784473225 22.356961789595577 26 18.17908807526415 30.31627151851507 27.692543745188786 23.812096661031998 27 23.917402474096473 26.944256112130365 28.865464283231983 20.27287713054118 28 18.60870431884974 29.84206750850118 27.033431644986962 24.515796527662122 29 21.94032845446999 28.279659716657857 26.73154623816949 23.048465590702662 30 27.224109916712674 27.330071432224628 25.43364881363756 20.012169837425134 31 24.67355853652459 28.29408517050231 27.192636199233878 19.83972009373922 32 27.692674885678276 28.319001863506355 23.934188456751833 20.054134794063533 33 26.666500555379972 28.65642634297697 25.917557219874077 18.75951588176898 34 22.439186876508934 27.139524300988406 30.101069975253793 20.32021884724887 35 22.21598576338846 31.789372637012303 26.446577954496874 19.548063645102363 36 26.157413175160414 29.26544277619171 26.186264082849313 18.39087996579856 37 20.756654396288198 30.24086573705545 30.592584529881016 18.409895336775335 38 21.083587636599212 31.37509983069763 28.368966390003948 19.17234614269921 39 19.522491249650837 30.54983273030565 29.24708310766241 20.680592912381105 40 23.22052191292009 27.026218918064732 31.05983809395167 18.693421075063505 41 19.28499582317541 27.42291889878708 28.297101401760692 24.994983876276816 42 20.828519384531454 26.583226344550653 31.714753698489655 20.873500572428235 43 21.387440150759108 26.16200309229274 31.45548895075806 20.995067806190093 44 23.1156095213241 26.807870003055573 26.740857212923636 23.33566326269669 45 20.96897084878059 27.292434111739567 25.937883995745803 25.800711043734044 46 24.449701720956643 26.17931363690608 28.070884057381836 21.300100584755445 47 19.820573582272953 26.648140886850673 30.782344818180267 22.748940712696104 48 18.744303584987563 28.290675517775437 29.518150499448552 23.446870397788448 49 24.246565102728905 23.55152050840545 31.376673516571568 20.825240872294078 50 20.853042656067018 24.98042728194287 30.349187781378312 23.817342280611797 51 20.136228740487397 24.92521713586548 27.26358320405067 27.674970919596454 52 19.45469161658193 25.955194540359138 31.830157329245246 22.759956513813684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 589.0 1 1243.5 2 1898.0 3 5868.0 4 9838.0 5 5643.0 6 1448.0 7 2005.0 8 2562.0 9 3300.5 10 4039.0 11 4987.5 12 5936.0 13 6229.0 14 6190.5 15 5859.0 16 5343.5 17 4828.0 18 4411.5 19 3995.0 20 3749.0 21 3503.0 22 3557.5 23 3612.0 24 3638.5 25 3665.0 26 4554.0 27 5443.0 28 6491.0 29 7539.0 30 8507.0 31 9475.0 32 10230.0 33 10985.0 34 13274.0 35 15563.0 36 16586.0 37 17609.0 38 19176.0 39 24333.5 40 27924.0 41 34620.5 42 41317.0 43 51059.0 44 60801.0 45 72280.0 46 83759.0 47 85191.5 48 86624.0 49 80286.0 50 73948.0 51 63887.0 52 53826.0 53 48122.0 54 42418.0 55 37839.0 56 33260.0 57 32025.0 58 30790.0 59 31570.5 60 32351.0 61 25708.0 62 19065.0 63 15169.5 64 9462.5 65 7651.0 66 6000.5 67 4350.0 68 3344.0 69 2338.0 70 2226.5 71 2115.0 72 1542.0 73 969.0 74 897.0 75 825.0 76 686.0 77 547.0 78 430.5 79 314.0 80 283.5 81 253.0 82 195.5 83 138.0 84 76.5 85 15.0 86 11.0 87 7.0 88 6.5 89 5.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 762541.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.324462999317994 #Duplication Level Percentage of deduplicated Percentage of total 1 67.91058549040241 15.1606735304251 2 13.094132526582397 5.8463895419571 3 5.68899326746809 3.810111591088816 4 3.0391893098058076 2.7139307717873016 5 1.766017980341958 1.9712701529137167 6 1.0981640660770111 1.4709553836190101 7 0.7494432850839584 1.171164322156091 8 0.5714653653716409 1.020612592370475 9 0.43734476423846413 0.8787138306468338 >10 3.727570596092504 17.996821295969482 >50 1.1107951014864734 17.945346506592774 >100 0.7933409340945274 24.65077341795329 >500 0.008834531560072688 1.4755147417406127 >1k 0.0029448438533575625 1.7345384488542295 >5k 0.001177937541343025 2.1531838719251715 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8469 1.1106288055330795 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 7907 1.0369278504368946 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 3802 0.4985961410599561 No Hit GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 3010 0.39473287337992313 No Hit CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCTT 2791 0.36601310618052013 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 2328 0.3052950595443393 No Hit TCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 1261 0.16536815725318377 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGGGAATATTCG 934 0.12248521718832169 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCG 924 0.12117381229337176 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 897 0.117633019077007 No Hit CGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 895 0.11737073809801703 No Hit GGGGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 871 0.11422336635013725 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 828 0.10858432530185262 No Hit ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 795 0.1042566891485179 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3754552214241595 0.0 2 0.0 0.0 0.0 1.3717295201176067 0.0 3 0.0 0.0 0.0 2.0834289566069235 0.0 4 0.0 0.0 0.0 2.942661443778105 0.0 5 0.0 0.0 0.0 5.242078786583279 0.0 6 0.0 0.0 0.0 7.012475394765659 0.0 7 0.0 0.0 0.0 8.364271560480027 0.0 8 0.0 0.0 0.0 11.09881304742958 0.0 9 0.0 0.0 0.0 12.376252555600288 0.0 10 0.0 0.0 0.0 13.937742364017147 0.0 11 0.0 0.0 0.0 16.38902039365752 0.0 12 0.0 0.0 0.0 17.73321041098118 0.0 13 0.0 0.0 0.0 18.299081623152066 0.0 14 0.0 0.0 0.0 18.532642834942646 0.0 15 0.0 0.0 0.0 18.917277890631453 0.0 16 0.0 0.0 0.0 19.71146469501312 0.0 17 0.0 0.0 0.0 20.6179077584025 0.0 18 0.0 0.0 0.0 21.4923525423551 0.0 19 0.0 0.0 0.0 22.02622547508921 0.0 20 0.0 0.0 0.0 22.64638884991102 0.0 21 1.3114048949499108E-4 0.0 0.0 23.284780752772637 0.0 22 2.6228097898998217E-4 0.0 0.0 23.94271258856901 0.0 23 2.6228097898998217E-4 0.0 0.0 24.580317648493654 0.0 24 2.6228097898998217E-4 0.0 0.0 25.049931741375218 0.0 25 2.6228097898998217E-4 0.0 0.0 25.527807685094967 0.0 26 2.6228097898998217E-4 0.0 0.0 25.9353923264454 0.0 27 2.6228097898998217E-4 0.0 0.0 26.42205468296131 0.0 28 2.6228097898998217E-4 0.0 0.0 26.843671356687707 0.0 29 3.934214684849733E-4 0.0 0.0 27.326006077050284 0.0 30 3.934214684849733E-4 0.0 0.0 28.278348311762908 0.0 31 3.934214684849733E-4 0.0 0.0 28.778255857717813 0.0 32 3.934214684849733E-4 0.0 0.0 29.135613691591665 0.0 33 3.934214684849733E-4 0.0 0.0 29.556574662870588 0.0 34 3.934214684849733E-4 0.0 0.0 30.035237449527305 0.0 35 3.934214684849733E-4 0.0 0.0 30.48636073339007 0.0 36 3.934214684849733E-4 0.0 0.0 30.874536582295246 0.0 37 3.934214684849733E-4 0.0 0.0 31.30834932154468 0.0 38 3.934214684849733E-4 0.0 0.0 31.77455376169937 0.0 39 3.934214684849733E-4 0.0 0.0 32.837840850524756 0.0 40 3.934214684849733E-4 0.0 0.0 33.23362284782064 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGGA 110 0.0 46.000004 4 TACGCGG 55 1.8189894E-12 46.000004 2 CTTGCGG 55 1.8189894E-12 46.000004 2 CGCTAGG 55 1.8189894E-12 46.000004 2 TCATCGA 115 0.0 46.000004 16 TCACGAG 45 3.092282E-10 46.0 1 TTCTACG 25 3.4160657E-5 46.0 1 CGGCGTT 20 6.3101115E-4 46.0 13 TCGTTGC 30 1.8605715E-6 46.0 42 CTCACGA 25 3.4160657E-5 46.0 27 CGAACGC 20 6.3101115E-4 46.0 21 ACACGAT 40 5.6079443E-9 46.0 23 GTCGATT 25 3.4160657E-5 46.0 14 GGTCGTA 20 6.3101115E-4 46.0 18 GTCGACC 25 3.4160657E-5 46.0 44 CAAGTCG 20 6.3101115E-4 46.0 1 CGCGGTA 20 6.3101115E-4 46.0 31 TTTACGT 50 1.6370905E-11 46.0 16 TTTACGC 20 6.3101115E-4 46.0 23 CACGGCA 40 5.6079443E-9 46.0 37 >>END_MODULE