##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933108.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1531457 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.467820513406515 33.0 31.0 34.0 31.0 34.0 2 32.86214630903773 34.0 31.0 34.0 31.0 34.0 3 32.91379712260938 34.0 31.0 34.0 31.0 34.0 4 36.346146186278816 37.0 37.0 37.0 35.0 37.0 5 36.24475450502365 37.0 37.0 37.0 35.0 37.0 6 36.330154878654774 37.0 37.0 37.0 35.0 37.0 7 36.54166587765768 37.0 37.0 37.0 35.0 37.0 8 36.49494435690979 37.0 37.0 37.0 35.0 37.0 9 38.31706277094297 39.0 39.0 39.0 37.0 39.0 10 38.002334378307715 39.0 39.0 39.0 35.0 39.0 11 37.69246149255252 39.0 37.0 39.0 35.0 39.0 12 37.43737303757141 39.0 37.0 39.0 35.0 39.0 13 37.37076391958769 39.0 37.0 39.0 35.0 39.0 14 38.336597762784066 41.0 38.0 41.0 33.0 41.0 15 38.5835978417938 41.0 38.0 41.0 33.0 41.0 16 38.76430484172915 41.0 38.0 41.0 35.0 41.0 17 38.789474990156435 41.0 38.0 41.0 35.0 41.0 18 38.74243938941805 40.0 38.0 41.0 35.0 41.0 19 38.722930516495076 40.0 37.0 41.0 35.0 41.0 20 38.601904591509914 40.0 37.0 41.0 35.0 41.0 21 38.560299113850405 40.0 37.0 41.0 35.0 41.0 22 38.499146890836634 40.0 36.0 41.0 35.0 41.0 23 38.46993614577491 40.0 36.0 41.0 35.0 41.0 24 38.425553574145404 40.0 36.0 41.0 35.0 41.0 25 38.301731618974614 40.0 36.0 41.0 34.0 41.0 26 38.22945730764886 40.0 35.0 41.0 34.0 41.0 27 38.124986205946364 40.0 35.0 41.0 34.0 41.0 28 38.116244204048826 40.0 35.0 41.0 34.0 41.0 29 38.10220985636554 40.0 35.0 41.0 34.0 41.0 30 38.07553852311884 40.0 35.0 41.0 34.0 41.0 31 37.99254239590142 40.0 35.0 41.0 34.0 41.0 32 37.90354283535222 40.0 35.0 41.0 34.0 41.0 33 37.80046778982368 40.0 35.0 41.0 34.0 41.0 34 37.667421285742925 40.0 35.0 41.0 34.0 41.0 35 37.614538965181524 40.0 35.0 41.0 34.0 41.0 36 37.52975303909937 40.0 35.0 41.0 33.0 41.0 37 37.433416674447926 40.0 35.0 41.0 33.0 41.0 38 37.39369241186661 40.0 35.0 41.0 33.0 41.0 39 37.32021010057743 40.0 35.0 41.0 33.0 41.0 40 37.287238231305224 40.0 35.0 41.0 33.0 41.0 41 37.18726154243965 40.0 35.0 41.0 33.0 41.0 42 37.18202274043607 40.0 35.0 41.0 33.0 41.0 43 37.15120829380126 40.0 35.0 41.0 33.0 41.0 44 37.13956643901853 40.0 35.0 41.0 33.0 41.0 45 37.103980719014636 40.0 35.0 41.0 33.0 41.0 46 37.041558463606876 40.0 35.0 41.0 33.0 41.0 47 36.96274985193838 39.0 35.0 41.0 33.0 41.0 48 36.860637941515826 39.0 35.0 41.0 32.0 41.0 49 36.82305151238331 39.0 35.0 41.0 32.0 41.0 50 36.72803545904325 39.0 35.0 41.0 32.0 41.0 51 36.660424680549305 39.0 35.0 41.0 32.0 41.0 52 36.41775250627344 39.0 35.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 3.0 12 3.0 13 5.0 14 10.0 15 20.0 16 66.0 17 120.0 18 256.0 19 459.0 20 787.0 21 1365.0 22 2170.0 23 3278.0 24 5210.0 25 8002.0 26 10649.0 27 12131.0 28 13232.0 29 15007.0 30 17832.0 31 21791.0 32 27708.0 33 38610.0 34 94982.0 35 143325.0 36 91404.0 37 104773.0 38 176338.0 39 737806.0 40 4112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.43471543765185 23.86655322349893 27.199196582078372 12.49953475677084 2 35.42410919797291 23.98180294974002 26.799707729306142 13.794380122980925 3 31.617080988888357 24.509862176998766 29.778635639133196 14.094421194979684 4 28.094226609039623 28.3370019530421 29.095168849011106 14.473602588907164 5 25.292580856008364 32.86099446474828 26.826479620387644 15.019945058855717 6 26.71345000218746 39.74306820237199 23.54483344945369 9.99864834598686 7 89.31344464780925 1.3362438514434294 7.174997404432511 2.1753140963148168 8 87.1972246037597 1.6669746522429294 7.648206903621844 3.487593840375538 9 81.98219081567423 3.8099665873739843 10.00746348085516 4.200379116096633 10 42.72330205810545 31.9854230317926 14.524077398190089 10.76719751191186 11 26.52408784575734 23.56546739477504 33.914043946385696 15.996400813081921 12 27.783280888722306 19.951980369021136 33.159925482726585 19.104813259529976 13 27.805286077245395 22.45730699588692 34.44954706531101 15.287859861556674 14 17.827663460351808 25.56428290183792 36.646670458262946 19.96138317954732 15 15.046455760755933 30.286583299433158 37.71741550693229 16.949545432878622 16 25.831805920766953 27.77283332147099 31.413941103145564 14.981419654616488 17 23.771545658807266 26.33015487865477 28.594860972263668 21.303438490274296 18 20.050513987660118 26.42176698398976 34.8079639193265 18.719755109023627 19 20.60319029525478 28.611642377161097 29.662928831824857 21.12223849575927 20 18.363558363049044 35.84997815805471 27.46541365510099 18.32104982379525 21 22.306078459924112 29.030851013120184 32.83735684384217 15.825713683113532 22 19.698300376700097 24.853652436862415 34.21134253198098 21.23670465445651 23 19.040364829048418 25.836964407097295 34.68644565273461 20.436225111119672 24 19.415758979847293 28.212610605456113 32.12548573025556 20.246144684441024 25 21.195306169223166 27.953706829509418 31.040309979320348 19.810677021947072 26 18.965142344838934 30.877980903153013 26.987176264171964 23.169700487836092 27 20.779754181802033 27.922755911527386 31.302086836261157 19.99540307040942 28 16.874322948669143 30.418940917048275 28.950470042580367 23.756266091702216 29 19.650894540297244 27.957951153705263 28.855984856251272 23.53516944974622 30 23.017035411376224 25.89351186484505 28.44748497672478 22.641967747053947 31 21.729046261174815 26.43012503779081 29.439024406170073 22.401804294864302 32 23.11824621912336 25.80451165132289 26.60903962696961 24.46820250258414 33 22.762637148806657 26.508351197585046 29.272777492283492 21.4562341613248 34 18.985580398274323 26.06615791367306 31.505096127413307 23.44316556063931 35 20.25476392742336 28.888437612025676 27.914920236088903 22.941878224462066 36 23.056279085863984 27.248300148159565 27.426822953566436 22.26859781241001 37 20.635512456438544 28.80328993892744 28.728328643899243 21.83286896073478 38 22.30033229793589 27.275463823012984 29.135457280223996 21.288746598827128 39 20.54840586448069 29.22798354769347 27.957102288866093 22.26650829895975 40 24.710520765519373 26.520757683695983 29.265333600616927 19.503387950167717 41 20.438184029979293 26.279549474781206 27.986877855532345 25.295388639707156 42 19.313568712670353 27.344613658757638 31.436925751098464 21.904891877473542 43 19.022408072835216 27.386665116944194 31.965050275652533 21.62587653456806 44 21.50520713281535 27.146697556640508 27.89676758798974 23.451327722554403 45 19.480925680577386 26.069488075734416 27.922168235869506 26.5274180078187 46 21.905153066654826 26.001187104828933 28.870023774745224 23.223636053771017 47 18.777282026201192 26.15613758662502 30.866292687290596 24.200287699883184 48 19.0173148838002 29.123507875180305 29.564852294253118 22.29432494676638 49 22.92901465728388 25.44844549993895 29.661100507555876 21.961439335221293 50 20.323130195624167 26.29345779868452 29.45214916252954 23.931262843161775 51 19.982539503231237 26.59565368142886 27.952009099831077 25.469797715508825 52 19.636006756964118 26.998668588148412 30.260137894828258 23.105186760059212 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 880.0 1 2173.5 2 3467.0 3 11766.0 4 20065.0 5 11810.0 6 3555.0 7 4071.0 8 4587.0 9 6291.5 10 7996.0 11 10159.5 12 12323.0 13 12563.5 14 12025.0 15 11246.0 16 10421.5 17 9597.0 18 8471.5 19 7346.0 20 7561.5 21 7777.0 22 8100.0 23 8423.0 24 9565.5 25 10708.0 26 13017.5 27 15327.0 28 17486.5 29 19646.0 30 23157.0 31 26668.0 32 31197.0 33 35726.0 34 39814.0 35 43902.0 36 46961.0 37 50020.0 38 52703.0 39 58595.0 40 61804.0 41 67099.5 42 72395.0 43 81553.0 44 90711.0 45 92741.0 46 94771.0 47 108983.0 48 123195.0 49 134875.5 50 146556.0 51 143924.5 52 141293.0 53 132032.5 54 122772.0 55 104548.0 56 86324.0 57 77214.0 58 68104.0 59 67083.0 60 66062.0 61 50091.5 62 34121.0 63 26850.0 64 17152.5 65 14726.0 66 11609.0 67 8492.0 68 7066.0 69 5640.0 70 4228.5 71 2817.0 72 2202.5 73 1588.0 74 1503.0 75 1418.0 76 1149.0 77 880.0 78 648.5 79 417.0 80 290.0 81 163.0 82 118.0 83 73.0 84 73.0 85 73.0 86 44.5 87 16.0 88 11.0 89 6.5 90 7.0 91 4.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1531457.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.14958569769319 #Duplication Level Percentage of deduplicated Percentage of total 1 69.89932894787391 13.385431898985578 2 11.994397398868585 4.593754817636445 3 4.989462880540722 2.86638441049121 4 2.6076902207000137 1.9974474941732552 5 1.5633538897527837 1.4968789643821458 6 1.0241197154560235 1.176688095349337 7 0.7075096445594485 0.9483961599304926 8 0.5356952671997752 0.8206673941672599 9 0.41278478875874364 0.7114191918335766 >10 3.669133338529318 15.61425506482503 >50 1.371367474749786 19.32018258240271 >100 1.2118022963739086 31.806632622376874 >500 0.008902757758038863 1.162636145543173 >1k 0.0034241375992457167 1.245517657469549 >5k 3.424137599245717E-4 0.622332618428191 >10k+ 6.848275198491434E-4 2.231374882005199 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 17244 1.1259865605106771 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16786 1.0960803992537824 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 9491 0.6197366298890534 No Hit CTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCTT 2972 0.19406356169321112 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 2649 0.17297253530461515 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCTGCT 2549 0.16644280577254209 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 2401 0.15677880606507397 No Hit GGGGCTGTCTCTTATACACATCTGACGCCTCCAGGTTCGTATGCCGTCTTCT 1748 0.11413967222063694 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20059329122528416 0.0 2 0.0 0.0 0.0 0.6599597638066234 0.0 3 0.0 0.0 0.0 1.0254940230120728 0.0 4 0.0 0.0 0.0 1.4822486037805829 0.0 5 0.0 0.0 0.0 2.7670381865112765 0.0 6 0.0 0.0 0.0 4.013432959593381 0.0 7 0.0 0.0 0.0 5.04304071221066 0.0 8 0.0 0.0 0.0 6.918836114889285 0.0 9 0.0 0.0 0.0 7.881514139802815 0.0 10 0.0 0.0 0.0 8.86972340718675 0.0 11 0.0 0.0 0.0 10.35699990270703 0.0 12 0.0 0.0 0.0 11.245696092022172 0.0 13 0.0 0.0 0.0 11.621547323888297 0.0 14 0.0 0.0 0.0 11.836571317379462 0.0 15 0.0 0.0 0.0 12.087182336820426 0.0 16 0.0 0.0 0.0 12.52728610728215 0.0 17 0.0 0.0 0.0 13.076697550110778 0.0 18 0.0 0.0 0.0 13.642302722178945 0.0 19 0.0 0.0 0.0 14.003135576121302 0.0 20 0.0 0.0 0.0 14.447548968074193 0.0 21 0.0 0.0 0.0 14.875768630787544 0.0 22 0.0 0.0 0.0 15.354201913602537 0.0 23 0.0 0.0 0.0 15.802924927046597 0.0 24 0.0 0.0 0.0 16.1286278361064 0.0 25 6.529729532073053E-5 0.0 0.0 16.46719431234439 0.0 26 6.529729532073053E-5 0.0 0.0 16.755481871185413 0.0 27 6.529729532073053E-5 0.0 0.0 17.12349742761305 0.0 28 6.529729532073053E-5 0.0 0.0 17.42837049946554 0.0 29 6.529729532073053E-5 0.0 0.0 17.822831460498076 0.0 30 6.529729532073053E-5 0.0 0.0 18.783093485484738 0.0 31 6.529729532073053E-5 0.0 0.0 19.20256331062511 0.0 32 6.529729532073053E-5 0.0 0.0 19.524152490079707 0.0 33 6.529729532073053E-5 0.0 0.0 19.857495182692038 0.0 34 6.529729532073053E-5 0.0 0.0 20.223421225669412 0.0 35 6.529729532073053E-5 0.0 0.0 20.60965472749153 0.0 36 6.529729532073053E-5 0.0 0.0 20.919947474855643 0.0 37 6.529729532073053E-5 0.0 0.0 21.26171351856435 0.0 38 6.529729532073053E-5 0.0 0.0 21.679159127549777 0.0 39 6.529729532073053E-5 0.0 0.0 22.90831541466721 0.0 40 1.3059459064146105E-4 0.0 0.0 23.26333680932602 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACTCG 20 6.312116E-4 46.0 39 CCTTACG 20 6.312116E-4 46.0 1 ATCTCGA 25 3.4176912E-5 46.0 10 TCGTTAC 20 6.312116E-4 46.0 24 ACCGGTC 30 1.861812E-6 46.0 21 TCGCACA 20 6.312116E-4 46.0 33 CGAACGT 25 3.4176912E-5 46.0 39 TCCGCAT 20 6.312116E-4 46.0 11 ACGTTGC 20 6.312116E-4 46.0 33 GCGAAGT 20 6.312116E-4 46.0 16 GCGAACG 25 3.4176912E-5 46.0 1 TTTCGCG 30 1.861812E-6 46.0 1 TAGCGTA 20 6.312116E-4 46.0 14 CGGCATA 20 6.312116E-4 46.0 10 GCAAACG 40 5.6134013E-9 46.0 1 CCTACGC 20 6.312116E-4 46.0 32 TAACGTG 20 6.312116E-4 46.0 34 AGGCGTA 25 3.4176912E-5 46.0 12 CGTTCGA 25 3.4176912E-5 46.0 26 TCGATAT 25 3.4176912E-5 46.0 13 >>END_MODULE