##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933107.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1027686 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.46018628258048 33.0 31.0 34.0 31.0 34.0 2 32.83115465229652 34.0 31.0 34.0 31.0 34.0 3 32.87601076593434 34.0 31.0 34.0 31.0 34.0 4 36.329910108729706 37.0 37.0 37.0 35.0 37.0 5 36.20473957998844 37.0 37.0 37.0 35.0 37.0 6 36.292957187312076 37.0 37.0 37.0 35.0 37.0 7 36.50718118180067 37.0 37.0 37.0 35.0 37.0 8 36.45267815266531 37.0 37.0 37.0 35.0 37.0 9 38.28064214166584 39.0 39.0 39.0 37.0 39.0 10 37.96496497957548 39.0 38.0 39.0 35.0 39.0 11 37.641899373933285 39.0 37.0 39.0 35.0 39.0 12 37.289973785767245 39.0 35.0 39.0 35.0 39.0 13 37.164546369221725 39.0 37.0 39.0 34.0 39.0 14 38.0218072446253 40.0 37.0 41.0 33.0 41.0 15 38.29108891237207 40.0 37.0 41.0 33.0 41.0 16 38.509199307959825 40.0 37.0 41.0 34.0 41.0 17 38.55488057636282 40.0 37.0 41.0 35.0 41.0 18 38.48169869006681 40.0 37.0 41.0 35.0 41.0 19 38.43169217056572 40.0 36.0 41.0 35.0 41.0 20 38.262654157009045 40.0 35.0 41.0 34.0 41.0 21 38.224408039031374 40.0 35.0 41.0 34.0 41.0 22 38.15838884639861 40.0 35.0 41.0 34.0 41.0 23 38.135797315522446 40.0 35.0 41.0 34.0 41.0 24 38.08156966232877 40.0 35.0 41.0 34.0 41.0 25 37.93958271300767 40.0 35.0 41.0 34.0 41.0 26 37.836641736872934 40.0 35.0 41.0 34.0 41.0 27 37.74398503044704 40.0 35.0 41.0 34.0 41.0 28 37.70804895658791 40.0 35.0 41.0 34.0 41.0 29 37.65883158863699 40.0 35.0 41.0 34.0 41.0 30 37.61162164318673 40.0 35.0 41.0 34.0 41.0 31 37.479647479872256 40.0 35.0 41.0 33.0 41.0 32 37.34602300702744 40.0 35.0 41.0 33.0 41.0 33 37.22746539312592 40.0 35.0 41.0 33.0 41.0 34 37.04964746041106 40.0 35.0 41.0 33.0 41.0 35 36.98214337842493 40.0 35.0 41.0 33.0 41.0 36 36.899576329734955 40.0 35.0 41.0 32.0 41.0 37 36.773067843679875 40.0 35.0 41.0 32.0 41.0 38 36.775430433031104 39.0 35.0 41.0 32.0 41.0 39 36.719146704343544 39.0 35.0 41.0 32.0 41.0 40 36.640790085687655 39.0 35.0 41.0 32.0 41.0 41 36.47434041137079 39.0 35.0 41.0 31.0 41.0 42 36.49425018926014 39.0 35.0 41.0 31.0 41.0 43 36.443112974196396 39.0 35.0 41.0 31.0 41.0 44 36.411613080259926 39.0 35.0 41.0 31.0 41.0 45 36.341055536418715 39.0 35.0 41.0 31.0 41.0 46 36.27355437361217 39.0 35.0 41.0 31.0 41.0 47 36.18073030088957 38.0 35.0 41.0 31.0 41.0 48 36.07266713762764 38.0 35.0 41.0 31.0 41.0 49 36.03190079460069 38.0 35.0 41.0 31.0 41.0 50 35.91474438690417 38.0 35.0 41.0 31.0 41.0 51 35.81690321751975 38.0 35.0 41.0 30.0 41.0 52 35.558035236443814 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 1.0 13 4.0 14 13.0 15 35.0 16 46.0 17 122.0 18 257.0 19 402.0 20 760.0 21 1153.0 22 1864.0 23 2895.0 24 4714.0 25 7283.0 26 9844.0 27 10883.0 28 11383.0 29 12222.0 30 14091.0 31 16855.0 32 21604.0 33 29601.0 34 76641.0 35 108984.0 36 67875.0 37 76615.0 38 117902.0 39 430264.0 40 3370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.46787832081005 22.13059241830676 26.263177663216197 13.138351597666992 2 37.70743203663376 23.43945524216541 25.759911101250772 13.093201619950062 3 32.80739447652298 23.67950911075951 29.720264750127956 13.792831662589547 4 29.26574848737844 26.88661711845836 29.277717123712886 14.569917270450313 5 26.417699569712926 31.213717030299136 27.273797638578323 15.094785761409613 6 27.804796406684535 38.074762135516096 25.09025130244063 9.030190155358737 7 86.38971436800735 1.7766127007665766 9.373096451639897 2.460576479586177 8 83.78123278900364 2.462522599315355 9.854955696584366 3.9012889150966346 9 78.536440118869 4.323986120274091 12.38277061281364 4.756803148043274 10 47.58710345377868 22.407622561755243 17.611994325114868 12.393279659351203 11 31.242616908277434 25.223463197902863 28.371603777807618 15.16231611601209 12 30.697119548188844 20.308537821863876 30.90253248560358 18.0918101443437 13 28.20511323497644 22.591238958203185 34.20480574805923 14.998842058761138 14 19.567941958925196 23.990304431509234 37.231313844890366 19.2104397646752 15 15.960127898988603 29.49908824290688 37.25106696014152 17.289716897962997 16 27.097673803087712 27.04152824890093 30.268389371850933 15.592408576160421 17 25.229982698995606 25.757089227643466 27.166177217554775 21.846750855806153 18 22.413947450875074 25.30763287618981 33.957940460413006 18.320479212522113 19 22.232179868169847 27.536913025963184 28.346985363233518 21.88392174263345 20 18.34266497743474 36.29523025515576 27.230691086577032 18.131413680832473 21 23.377665940764008 28.46842323433422 32.34314761512758 15.810763209774192 22 20.493711114095163 24.658407334536037 34.213174062894694 20.634707488474106 23 20.315446546902457 25.76993361785604 33.33917169252087 20.57544814272064 24 21.778928583244298 29.144213310291278 29.75169458375418 19.325163522710245 25 22.14392333845163 27.250541507814646 30.60214890540496 20.00338624832877 26 18.566274134317293 30.978333849055062 27.229328802766606 23.226063213861043 27 22.08096636521272 27.273992250551238 30.372896001307794 20.272145382928247 28 17.618027296275322 30.465628606403122 27.417615886564572 24.49872821075698 29 20.564063342304944 29.614590448833596 26.862485233816557 22.958860975044907 30 23.851254176859467 27.24441123066773 26.38490745227628 22.51942714019652 31 21.392039981083716 28.088443357212224 28.67811763515315 21.84139902655091 32 23.54289150577122 29.116286492177572 23.884435518241954 23.456386483809258 33 22.97180267124394 27.744369389093553 27.35787001087881 21.925957928783696 34 17.724577351447817 28.295997026329054 31.076612895378545 22.902812726844584 35 20.284795161167906 32.665035818333614 25.948490103008115 21.101678917490364 36 23.21847334691725 28.960499607856878 25.71330153373696 22.10772551148892 37 19.150110053070684 32.759422625198745 26.717888537938634 21.372578783791937 38 22.096924546991982 29.04972919743968 28.348834176976233 20.5045120785921 39 19.976043266133818 31.835210365812127 26.24624642157235 21.942499946481707 40 25.028656613012146 28.491290141152064 27.67051414537125 18.80953910046454 41 20.513366923359857 28.217471095256723 25.91637912747668 25.352782853906735 42 19.637223821283932 29.61303355305025 28.746718355606678 22.003024270059143 43 19.29830707044759 28.821935883139403 29.843064905039085 22.03669214137392 44 21.977043571674617 27.80859134015643 27.19517440151953 23.019190686649424 45 19.691909785673833 27.740185231675824 25.757770369548677 26.810134613101667 46 22.513394169036065 26.59226650942019 27.659810486860774 23.23452883468297 47 18.194857184003673 27.091738137913723 30.60292735329663 24.110477324785975 48 18.276107682696853 29.99836525942749 28.676755351342724 23.048771706532932 49 23.022888314134864 27.1500244238026 28.34863956500332 21.47844769705922 50 21.62576896055799 26.420618749306694 28.343385041734535 23.610227248400776 51 19.8839918029437 27.562796418361252 26.26376149913495 26.2894502795601 52 20.253851857473975 28.712369342386683 28.246273667248555 22.787505132890786 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 738.0 1 2371.5 2 4005.0 3 10445.0 4 16885.0 5 10329.0 6 3773.0 7 4232.5 8 4692.0 9 6023.0 10 7354.0 11 8815.0 12 10276.0 13 10751.0 14 10224.0 15 9222.0 16 8540.0 17 7858.0 18 7117.5 19 6377.0 20 5915.5 21 5454.0 22 5260.0 23 5066.0 24 5651.0 25 6236.0 26 7104.0 27 7972.0 28 8498.5 29 9025.0 30 10219.0 31 11413.0 32 13677.0 33 15941.0 34 17655.5 35 19370.0 36 22413.5 37 25457.0 38 26526.0 39 31247.0 40 34899.0 41 41410.5 42 47922.0 43 56541.5 44 65161.0 45 77663.0 46 90165.0 47 92432.0 48 94699.0 49 95863.5 50 97028.0 51 85188.0 52 73348.0 53 65805.5 54 58263.0 55 56701.5 56 55140.0 57 51386.5 58 47633.0 59 49333.5 60 51034.0 61 39480.5 62 27927.0 63 24019.5 64 17932.5 65 15753.0 66 13814.0 67 11875.0 68 9399.0 69 6923.0 70 6192.0 71 5461.0 72 4259.5 73 3058.0 74 2500.5 75 1943.0 76 1597.0 77 1251.0 78 1080.5 79 910.0 80 808.0 81 706.0 82 553.0 83 400.0 84 220.5 85 41.0 86 58.0 87 75.0 88 43.0 89 10.0 90 9.0 91 6.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1027686.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.438855199784 #Duplication Level Percentage of deduplicated Percentage of total 1 71.33629703077253 16.720411365930588 2 11.485597578431891 5.384185170477098 3 4.700759639737097 3.3054127357435985 4 2.4382943317895838 2.2860331110908056 5 1.498091019642821 1.7556769242752421 6 0.9546785046767519 1.342594274007882 7 0.7006110370447097 1.1495064454063018 8 0.5569496588877643 1.044340992659152 9 0.4282700137514272 0.9034342954856285 >10 4.040920274551182 21.143302908886756 >50 1.3207960988155072 22.694422409581602 >100 0.5258185093706361 15.91795208548921 >500 0.007083133644453893 1.0989583411639012 >1k 0.004583204122881932 1.6459472035880558 >5k 4.1665492026199375E-4 0.7999260439414836 >10k+ 8.333098405239875E-4 2.8078956922726817 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 15328 1.4915061604420026 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13424 1.3062355622242592 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 8191 0.7970333350848411 No Hit CTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCGTCTTCTGCTT 2504 0.2436541900930829 Illumina Single End Adapter 2 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCGTCTTCTGCT 1977 0.19237393522924318 Illumina Single End Adapter 2 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1886 0.18351909046148338 No Hit CCTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCGTCTTCTGCT 1800 0.17515077562601805 Illumina Single End Adapter 2 (95% over 22bp) GGGGCTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCGTCTTCT 1466 0.14265057614874582 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCATAGATCGTATGCCG 1374 0.13369842539452714 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCACCATAGATCG 1347 0.13107116376013686 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1235 0.12017289327674018 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1158 0.11268033231940494 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCACCATAGAT 1090 0.10606352524019982 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2528982588066783 0.0 2 0.0 0.0 0.0 0.7662846433638291 0.0 3 0.0 0.0 0.0 1.1651418818588557 0.0 4 0.0 0.0 0.0 1.6359082443470088 0.0 5 0.0 0.0 0.0 3.0267027088040512 0.0 6 0.0 0.0 0.0 4.287107151406169 0.0 7 0.0 0.0 0.0 5.34044445482375 0.0 8 0.0 0.0 0.0 7.294056744959064 0.0 9 0.0 0.0 0.0 8.290956576230483 0.0 10 0.0 0.0 0.0 9.389833081310828 0.0 11 0.0 0.0 0.0 11.079259618210232 0.0 12 0.0 0.0 0.0 12.035777465101209 0.0 13 9.730598645889892E-5 0.0 0.0 12.471902896409993 0.0 14 9.730598645889892E-5 0.0 0.0 12.69667972513005 0.0 15 9.730598645889892E-5 0.0 0.0 13.001052850773485 0.0 16 9.730598645889892E-5 0.0 0.0 13.532538148811991 0.0 17 9.730598645889892E-5 0.0 0.0 14.137392160640507 0.0 18 9.730598645889892E-5 0.0 0.0 14.821550551433026 0.0 19 9.730598645889892E-5 0.0 0.0 15.253978355256372 0.0 20 9.730598645889892E-5 0.0 0.0 15.771840815190632 0.0 21 9.730598645889892E-5 0.0 0.0 16.30498031499894 0.0 22 9.730598645889892E-5 0.0 0.0 16.835395247186398 0.0 23 9.730598645889892E-5 0.0 0.0 17.34965738562168 0.0 24 9.730598645889892E-5 0.0 0.0 17.719322828179035 0.0 25 1.9461197291779784E-4 0.0 0.0 18.14941528832737 0.0 26 1.9461197291779784E-4 0.0 0.0 18.507404012509657 0.0 27 1.9461197291779784E-4 0.0 0.0 18.965034066825858 0.0 28 1.9461197291779784E-4 0.0 0.0 19.34141362244888 0.0 29 2.919179593766968E-4 0.0 0.0 19.812082678950574 0.0 30 2.919179593766968E-4 0.0 0.0 21.028894039619104 0.0 31 2.919179593766968E-4 0.0 0.0 21.51532666592714 0.0 32 2.919179593766968E-4 0.0 0.0 21.851421543156178 0.0 33 2.919179593766968E-4 0.0 0.0 22.261858194039814 0.0 34 2.919179593766968E-4 0.0 0.0 22.715887926857036 0.0 35 2.919179593766968E-4 0.0 0.0 23.161549344838793 0.0 36 2.919179593766968E-4 0.0 0.0 23.510196694321028 0.0 37 2.919179593766968E-4 0.0 0.0 23.90934585077543 0.0 38 2.919179593766968E-4 0.0 0.0 24.386145184424038 0.0 39 2.919179593766968E-4 0.0 0.0 25.783264538000907 0.0 40 2.919179593766968E-4 0.0 0.0 26.190684703304317 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAC 25 3.416901E-5 46.0 34 TCGTTAG 30 1.86121E-6 46.0 1 GCGAATA 25 3.416901E-5 46.0 13 ACGTTAG 25 3.416901E-5 46.0 1 CGTGACA 25 3.416901E-5 46.0 12 ATTACGT 20 6.311142E-4 46.0 12 ATTACCG 25 3.416901E-5 46.0 1 ATTCGTG 25 3.416901E-5 46.0 15 CGACATA 20 6.311142E-4 46.0 14 ATCGTTC 20 6.311142E-4 46.0 26 CCCGTAG 20 6.311142E-4 46.0 20 TACGCAA 25 3.416901E-5 46.0 15 CTACGTA 25 3.416901E-5 46.0 30 CGGATAA 20 6.311142E-4 46.0 23 CTACGCG 25 3.416901E-5 46.0 1 GCGATGT 40 5.6097633E-9 46.0 9 CGTACGT 20 6.311142E-4 46.0 23 GTATCGC 20 6.311142E-4 46.0 9 TTAACGC 25 3.416901E-5 46.0 28 ACTCGCG 20 6.311142E-4 46.0 37 >>END_MODULE