##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933106.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1412416 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.508273058362406 33.0 31.0 34.0 31.0 34.0 2 32.88329288255019 34.0 31.0 34.0 31.0 34.0 3 32.93012681816122 34.0 31.0 34.0 31.0 34.0 4 36.367358483619554 37.0 37.0 37.0 35.0 37.0 5 36.2849266788255 37.0 37.0 37.0 35.0 37.0 6 36.36923257737097 37.0 37.0 37.0 35.0 37.0 7 36.56948165413023 37.0 37.0 37.0 35.0 37.0 8 36.51809240337124 37.0 37.0 37.0 35.0 37.0 9 38.331771234537136 39.0 39.0 39.0 37.0 39.0 10 38.033870332819795 39.0 39.0 39.0 35.0 39.0 11 37.718046241334 39.0 37.0 39.0 35.0 39.0 12 37.454587033848384 39.0 37.0 39.0 35.0 39.0 13 37.393417378449406 39.0 37.0 39.0 35.0 39.0 14 38.37368593955322 41.0 38.0 41.0 33.0 41.0 15 38.60592700734061 41.0 38.0 41.0 33.0 41.0 16 38.778220439304 41.0 38.0 41.0 35.0 41.0 17 38.76642292355793 41.0 38.0 41.0 35.0 41.0 18 38.739478312338576 40.0 38.0 41.0 35.0 41.0 19 38.71749541211654 41.0 37.0 41.0 35.0 41.0 20 38.61852457066473 41.0 37.0 41.0 35.0 41.0 21 38.56544459989125 40.0 36.0 41.0 35.0 41.0 22 38.51745661334904 40.0 36.0 41.0 35.0 41.0 23 38.48551205877022 40.0 36.0 41.0 35.0 41.0 24 38.464921807739366 40.0 36.0 41.0 35.0 41.0 25 38.34755695205945 40.0 35.0 41.0 35.0 41.0 26 38.2647739759391 40.0 35.0 41.0 35.0 41.0 27 38.17311259572251 40.0 35.0 41.0 34.0 41.0 28 38.16084213149667 40.0 35.0 41.0 34.0 41.0 29 38.121851494177356 40.0 35.0 41.0 34.0 41.0 30 38.08164662535683 40.0 35.0 41.0 34.0 41.0 31 37.98013828786986 40.0 35.0 41.0 34.0 41.0 32 37.91554896007975 40.0 35.0 41.0 34.0 41.0 33 37.816170306765144 40.0 35.0 41.0 34.0 41.0 34 37.68062100684217 40.0 35.0 41.0 34.0 41.0 35 37.61055170714577 40.0 35.0 41.0 34.0 41.0 36 37.53670377565816 40.0 35.0 41.0 33.0 41.0 37 37.447058090534235 40.0 35.0 41.0 33.0 41.0 38 37.398337317051066 40.0 35.0 41.0 33.0 41.0 39 37.371226324255744 40.0 35.0 41.0 33.0 41.0 40 37.32538218202003 40.0 35.0 41.0 33.0 41.0 41 37.23075991775794 40.0 35.0 41.0 33.0 41.0 42 37.24665820834655 40.0 35.0 41.0 33.0 41.0 43 37.2092414699352 40.0 35.0 41.0 33.0 41.0 44 37.17541432552449 40.0 35.0 41.0 33.0 41.0 45 37.121672368480674 40.0 35.0 41.0 33.0 41.0 46 37.045683424713395 40.0 35.0 41.0 33.0 41.0 47 36.94372267094114 39.0 35.0 41.0 33.0 41.0 48 36.896635976935976 39.0 35.0 41.0 33.0 41.0 49 36.86228632357606 39.0 35.0 41.0 33.0 41.0 50 36.75422963206307 39.0 35.0 41.0 32.0 41.0 51 36.67248388576736 39.0 35.0 41.0 32.0 41.0 52 36.45415090171734 39.0 35.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 10.0 14 5.0 15 27.0 16 55.0 17 117.0 18 208.0 19 396.0 20 670.0 21 1055.0 22 1733.0 23 2781.0 24 4538.0 25 7177.0 26 9485.0 27 10953.0 28 12135.0 29 13294.0 30 16042.0 31 19830.0 32 25206.0 33 35256.0 34 86399.0 35 139265.0 36 87341.0 37 95249.0 38 155881.0 39 681430.0 40 5874.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.26927194254384 23.82322205355929 26.93696474693008 12.970541256966786 2 33.900210702795775 24.05339503375776 28.4998187502832 13.546575513163262 3 30.703135620100593 25.003681634872443 30.031874461914903 14.261308283112056 4 26.542534210884046 28.317719425438398 30.506309755766008 14.633436607911552 5 24.99178712220762 32.70233415650913 26.733625220898094 15.572253500385155 6 26.628769427704018 39.644977117223256 24.191456341474467 9.53479711359826 7 89.80293341338529 1.1769903484525805 6.974361661153654 2.0457145770084737 8 87.82745310163578 1.5301440935248538 7.257422742308216 3.3849800625311524 9 82.65086206896551 3.800792401105623 9.537204336399475 4.011141193529385 10 43.51140173999728 32.93151592731887 13.698513752322262 9.858568580361593 11 26.36524933164167 24.289232067606147 33.52121471294576 15.824303887806426 12 28.777215777787845 19.73150969685985 31.933722076215503 19.557552449136796 13 27.669326883864244 24.11839004939055 32.99835176038787 15.213931306357335 14 17.735780393311888 24.726001404685306 36.84530619874031 20.692912003262496 15 15.282183152838824 30.6555575694413 37.68776337849472 16.37449589922516 16 26.190300874529882 28.849857265848023 30.412711269201143 14.547130590420954 17 23.24039093298292 27.363467986768768 28.968377588472517 20.427763491775792 18 20.61920850514296 26.608732837917444 32.96833227604331 19.80372638089628 19 19.87396064615524 30.353167905206398 29.122015043726496 20.65085640491187 20 18.743840341655716 36.92141691966106 26.960328968235984 17.374413770447234 21 22.40919105985772 30.344601024060903 31.137497734378538 16.10871018170284 22 19.619857039285876 25.226491345326025 32.668420635280256 22.485230980107843 23 17.98202512574199 28.3209762562871 33.72427103629526 19.972727581675652 24 18.915956771942543 30.423331369794738 30.936707032489014 19.72400482577371 25 22.087402011871855 28.393405342335402 30.03506049209298 19.48413215369976 26 18.623974806289365 32.50012744120712 26.52327642847433 22.352621324029183 27 20.096416353255698 28.563680955186005 30.459014907789207 20.880887783769086 28 16.475670057546786 31.528034233540257 27.975327382300964 24.02096832661199 29 19.10683537994472 29.412651796637817 27.994939168063798 23.485573655353665 30 24.805510557796005 27.501600095156103 26.83656939598532 20.856319951062577 31 21.104193098917033 28.34356167021614 29.464407086863925 21.087838144002898 32 23.23401887262676 27.016049096017035 26.122757034754635 23.627174996601568 33 23.436862793964384 27.218680615342787 26.939655172413797 22.404801418279032 34 18.644719402782183 28.6281095654538 30.278048393674382 22.449122638089626 35 19.32808747564457 30.59983744166025 27.54443450088359 22.527640581811593 36 22.83165866147084 30.08504576555349 24.393521455435227 22.68977411754044 37 19.248365920521998 32.74311534278853 26.086577892065794 21.92194084462368 38 21.886894512664824 28.464418414971227 27.77637749784766 21.87230957451629 39 19.766202025465585 30.548436154787257 25.848121233404324 23.837240586342833 40 23.811681544247588 29.598007952331322 27.648086682677057 18.94222382074403 41 19.711827110426388 28.774171348951015 26.601935973537543 24.91206556708505 42 18.92466525442929 30.290934115727946 28.93488887126739 21.849511758575378 43 19.130057999909376 28.507394422039965 29.844677488785177 22.517870089265486 44 21.103131088857673 28.067580656123976 27.568860732248858 23.260427522769493 45 19.19462821151842 26.466423489963297 26.751325388554083 27.587622909964203 46 22.48678859486157 27.220096628755268 27.22767230051203 23.06544247587113 47 18.15322114731071 27.667202863745526 31.25608885767366 22.923487131270107 48 19.549481172685667 29.565439643844304 28.055969346141644 22.829109837328378 49 22.07437468847705 27.719170555983506 28.441762200371564 21.764692555167883 50 20.604765168335675 26.619140536499163 28.59185962209434 24.184234673070822 51 19.373116702161404 27.379681340341655 27.04174973945353 26.20545221804341 52 19.77384849789297 27.68143379854094 29.23678293080792 23.30793477275817 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 703.0 1 1839.0 2 2975.0 3 11967.5 4 20960.0 5 12165.5 6 3371.0 7 4031.5 8 4692.0 9 6412.5 10 8133.0 11 10317.5 12 12502.0 13 13217.0 14 12884.5 15 11837.0 16 10349.5 17 8862.0 18 8277.5 19 7693.0 20 8001.0 21 8309.0 22 8156.5 23 8004.0 24 8711.5 25 9419.0 26 11919.5 27 14420.0 28 18121.5 29 21823.0 30 23180.0 31 24537.0 32 26672.5 33 28808.0 34 34059.5 35 39311.0 36 41855.5 37 44400.0 38 47468.0 39 54657.0 40 58778.0 41 63018.0 42 67258.0 43 70841.0 44 74424.0 45 78885.5 46 83347.0 47 93185.5 48 103024.0 49 121739.0 50 140454.0 51 139675.0 52 138896.0 53 127877.0 54 116858.0 55 101009.0 56 85160.0 57 75099.0 58 65038.0 59 61030.5 60 57023.0 61 43048.5 62 29074.0 63 23903.5 64 14685.5 65 10638.0 66 8642.5 67 6647.0 68 4930.0 69 3213.0 70 2647.5 71 2082.0 72 1752.0 73 1422.0 74 1756.5 75 2091.0 76 1964.5 77 1838.0 78 1334.0 79 830.0 80 536.0 81 242.0 82 166.5 83 91.0 84 51.0 85 11.0 86 9.0 87 7.0 88 7.0 89 4.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1412416.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.3256892447781 #Duplication Level Percentage of deduplicated Percentage of total 1 69.0590270765604 14.036723239048833 2 12.370339805173725 5.028713654645399 3 5.073457720112887 3.0936457504660475 4 2.771116852757791 2.2529944004048943 5 1.6272023233031712 1.6537004380920601 6 1.0650817032188014 1.2989111831954598 7 0.7228326085348088 1.0284449683949604 8 0.551389994383996 0.8965905342823235 9 0.42523340957202843 0.7778845925512649 >10 4.051021622009126 18.71694282276194 >50 1.331719311116274 19.58862632090137 >100 0.9375889282991817 26.327927475363662 >500 0.009092619222591835 1.217140726214775 >1k 0.003846877363404238 1.3659868793826626 >5k 3.4971612394583984E-4 0.4974333237196166 >10k+ 6.994322478916797E-4 2.2183336905747066 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17767 1.2579155149757577 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 13441 0.9516318138565408 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6998 0.4954630930264171 No Hit CTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCTT 2937 0.20794156962254748 Illumina Single End Adapter 2 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 2353 0.16659397797815942 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 2219 0.15710668811454984 Illumina Single End Adapter 2 (95% over 22bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 2212 0.15661108342018218 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1671 0.11830792061262405 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCG 1501 0.10627180660655218 No Hit GGGGCTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCT 1491 0.10556379990031267 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21325161991934388 0.0 2 0.0 0.0 0.0 0.6575966287552676 0.0 3 0.0 0.0 0.0 0.9885189632516199 0.0 4 0.0 0.0 0.0 1.421960668811455 0.0 5 0.0 0.0 0.0 2.6584235805881553 0.0 6 0.0 0.0 0.0 3.864796207349676 0.0 7 0.0 0.0 0.0 4.909743305088586 0.0 8 0.0 0.0 0.0 6.843026417146223 0.0 9 0.0 0.0 0.0 7.856679618469346 0.0 10 0.0 0.0 0.0 8.927964565680366 0.0 11 0.0 0.0 0.0 10.49931464950836 0.0 12 7.080067062395215E-5 0.0 0.0 11.405563233494947 0.0 13 1.416013412479043E-4 0.0 0.0 11.789232067606145 0.0 14 1.416013412479043E-4 0.0 0.0 12.011192170012235 0.0 15 1.416013412479043E-4 0.0 0.0 12.281579931125108 0.0 16 1.416013412479043E-4 0.0 0.0 12.750917576691286 0.0 17 1.416013412479043E-4 0.0 0.0 13.330491866418958 0.0 18 1.416013412479043E-4 0.0 0.0 13.922102270152703 0.0 19 2.1240201187185646E-4 0.0 0.0 14.315116792786261 0.0 20 2.1240201187185646E-4 0.0 0.0 14.78247201957497 0.0 21 2.1240201187185646E-4 0.0 0.0 15.248057229598079 0.0 22 2.1240201187185646E-4 0.0 0.0 15.752087203769994 0.0 23 2.1240201187185646E-4 0.0 0.0 16.240682631745887 0.0 24 4.248040237437129E-4 0.0 0.0 16.569976550817888 0.0 25 4.248040237437129E-4 0.0 0.0 16.947698128596674 0.0 26 4.248040237437129E-4 0.0 0.0 17.247963772712854 0.0 27 4.248040237437129E-4 0.0 0.0 17.653014409352487 0.0 28 4.248040237437129E-4 0.0 0.0 17.985494358602566 0.0 29 4.248040237437129E-4 0.0 0.0 18.41836965879741 0.0 30 4.248040237437129E-4 0.0 0.0 19.289288708142642 0.0 31 4.248040237437129E-4 0.0 0.0 19.705242648058363 0.0 32 4.248040237437129E-4 0.0 0.0 20.017190402827495 0.0 33 4.248040237437129E-4 0.0 0.0 20.38379627531832 0.0 34 4.248040237437129E-4 0.0 0.0 20.765128687298926 0.0 35 4.248040237437129E-4 0.0 0.0 21.178038198377816 0.0 36 4.248040237437129E-4 0.0 0.0 21.494587996737504 0.0 37 4.248040237437129E-4 0.0 0.0 21.893549775703477 0.0 38 4.248040237437129E-4 0.0 0.0 22.321752231637138 0.0 39 4.248040237437129E-4 0.0 0.0 23.546674634102136 0.0 40 4.248040237437129E-4 0.0 0.0 23.961920567311612 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATGCG 70 0.0 46.000004 1 TCCCGAA 35 1.0197982E-7 46.000004 29 ACGTCCC 35 1.0197982E-7 46.000004 43 CTCGACC 35 1.0197982E-7 46.000004 33 TGTACGC 35 1.0197982E-7 46.000004 16 CGTCCCA 35 1.0197982E-7 46.000004 44 TCGCCTG 20 6.3119474E-4 46.0 42 CTGTCGA 25 3.417556E-5 46.0 42 TCGTTAG 50 1.6370905E-11 46.0 1 TCGTTAC 25 3.417556E-5 46.0 21 AGATCCG 30 1.8617084E-6 46.0 19 GTCGACA 20 6.3119474E-4 46.0 10 GTCGAAA 25 3.417556E-5 46.0 44 GGTCGAC 20 6.3119474E-4 46.0 9 CGACGAT 25 3.417556E-5 46.0 20 ACGTTCC 25 3.417556E-5 46.0 14 GACGTAC 20 6.3119474E-4 46.0 13 CCGGATA 20 6.3119474E-4 46.0 34 TCGGGTA 20 6.3119474E-4 46.0 26 ACATTCG 20 6.3119474E-4 46.0 17 >>END_MODULE