##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933105.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1279365 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45630293153244 33.0 31.0 34.0 31.0 34.0 2 32.84783779453088 34.0 31.0 34.0 31.0 34.0 3 32.8845489754683 34.0 31.0 34.0 31.0 34.0 4 36.33600731612949 37.0 37.0 37.0 35.0 37.0 5 36.13218823400671 37.0 35.0 37.0 35.0 37.0 6 36.22449105610987 37.0 36.0 37.0 35.0 37.0 7 36.490797387766584 37.0 37.0 37.0 35.0 37.0 8 36.458922981322765 37.0 37.0 37.0 35.0 37.0 9 38.27945347887429 39.0 39.0 39.0 37.0 39.0 10 38.000574503757726 39.0 38.0 39.0 35.0 39.0 11 37.65593634342037 39.0 37.0 39.0 35.0 39.0 12 37.18338316274089 39.0 35.0 39.0 35.0 39.0 13 37.03682842660226 39.0 35.0 39.0 34.0 39.0 14 37.57604358412181 40.0 36.0 41.0 31.0 41.0 15 37.982099713529756 40.0 35.0 41.0 33.0 41.0 16 38.266268031406206 40.0 35.0 41.0 33.0 41.0 17 38.35125081583442 40.0 35.0 41.0 34.0 41.0 18 38.32496199286365 40.0 36.0 41.0 35.0 41.0 19 38.26897171643745 40.0 36.0 41.0 35.0 41.0 20 38.06243018997706 40.0 35.0 41.0 33.0 41.0 21 38.024653636765116 40.0 35.0 41.0 34.0 41.0 22 37.942184599391105 40.0 35.0 41.0 34.0 41.0 23 37.94754741610095 40.0 35.0 41.0 34.0 41.0 24 37.92597030558129 40.0 35.0 41.0 34.0 41.0 25 37.726590144329414 40.0 35.0 41.0 34.0 41.0 26 37.64450332782279 39.0 35.0 41.0 34.0 41.0 27 37.54567617529008 39.0 35.0 41.0 34.0 41.0 28 37.535608680869025 39.0 35.0 41.0 34.0 41.0 29 37.4722139498892 39.0 35.0 41.0 34.0 41.0 30 37.43323680106928 39.0 35.0 41.0 34.0 41.0 31 37.29918436099159 40.0 35.0 41.0 33.0 41.0 32 37.17978997393238 39.0 35.0 41.0 33.0 41.0 33 37.11263869185103 39.0 35.0 41.0 33.0 41.0 34 36.9456894631321 39.0 35.0 41.0 33.0 41.0 35 36.86336659202026 39.0 35.0 41.0 32.0 41.0 36 36.82197340086684 39.0 35.0 41.0 32.0 41.0 37 36.718909771644526 39.0 35.0 41.0 32.0 41.0 38 36.7023570286822 39.0 35.0 41.0 32.0 41.0 39 36.675992386848165 39.0 35.0 41.0 32.0 41.0 40 36.61482532350033 39.0 35.0 41.0 32.0 41.0 41 36.45673674049235 39.0 35.0 41.0 31.0 41.0 42 36.50727665677895 39.0 35.0 41.0 32.0 41.0 43 36.48827582433473 39.0 35.0 41.0 32.0 41.0 44 36.4523853630512 39.0 35.0 41.0 32.0 41.0 45 36.39421978872331 38.0 35.0 41.0 32.0 41.0 46 36.35665036951925 38.0 35.0 41.0 32.0 41.0 47 36.2642248302869 38.0 35.0 41.0 32.0 41.0 48 36.14204077804223 38.0 35.0 41.0 31.0 41.0 49 36.136869462584954 38.0 35.0 41.0 31.0 41.0 50 36.0312225205473 38.0 35.0 41.0 31.0 41.0 51 35.96352800021886 37.0 35.0 41.0 31.0 41.0 52 35.71940298507463 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 5.0 14 13.0 15 34.0 16 76.0 17 155.0 18 295.0 19 540.0 20 964.0 21 1520.0 22 2410.0 23 3793.0 24 6167.0 25 8894.0 26 11400.0 27 12467.0 28 13369.0 29 14756.0 30 17324.0 31 21832.0 32 27390.0 33 39162.0 34 112670.0 35 147511.0 36 78732.0 37 88432.0 38 143031.0 39 522980.0 40 3440.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.976472703255126 21.579064614085894 25.4485623727396 12.995900309919376 2 39.732367229055036 22.27777061276493 25.43253879854459 12.557323359635445 3 36.023496031234245 22.340692452896555 28.423866527535147 13.211944988334057 4 32.45977496648728 25.804129392315716 27.88094093554224 13.85515470565476 5 26.120536359834762 29.577642033352486 29.787589937195406 14.51423166961735 6 27.054593489739048 36.04553821622446 27.79574241909072 9.104125874945773 7 86.53050536789736 1.7291390650830685 9.274601071625376 2.4657544953941994 8 85.18155491200713 1.7458661132671287 9.23067302919808 3.8419059455276643 9 79.1752939935046 3.9811937953594168 11.82047343799463 5.023038773141363 10 51.20047836231255 21.147209748586214 16.90190055222708 10.750411336874151 11 34.24401949404587 23.654000226674953 26.970332938606262 15.131647340672913 12 33.09884200365025 17.169611486948604 32.69895612276403 17.03259038663712 13 30.072027920100986 19.589952828160843 34.908411594814616 15.429607656923553 14 17.68002094789212 21.54959687032239 42.197965396896116 18.572416784889377 15 15.632755312205665 28.796238759071883 39.53758309786496 16.033422830857496 16 31.14787414068698 23.8219741825046 29.83941252105537 15.19073915575305 17 26.624067408440904 22.44214903487277 26.554110828418786 24.37967272826754 18 23.131944363023845 22.04234131776311 35.44156671473739 19.384147604475658 19 23.37167266573652 24.805587146748582 27.52115307203183 24.301587115483073 20 17.62538446807596 38.62259792944156 25.286763355258273 18.46525424722421 21 24.83192833944965 26.20854877224248 33.15801198250695 15.801510905800924 22 18.789321264846233 21.869990190446043 38.400534640231676 20.94015390447605 23 22.0900993852419 23.27146670418528 34.75450711876595 19.88392679180687 24 23.880049868489444 28.50695462201952 28.875027845845402 18.737967663645634 25 24.998104528418395 24.02777940618979 31.05118554908099 19.922930516310828 26 17.888640067533505 29.788449738737576 26.50283539099475 25.820074802734165 27 23.937578408038362 25.181867567113375 32.16290894310849 18.71764508173977 28 17.878166121474326 30.235468376890097 26.342443321491523 25.543922180144058 29 23.630003947270716 29.806740062452857 25.722057426926636 20.841198563349785 30 26.731620764988882 24.00433027322148 26.18494331172105 23.079105650068588 31 24.981533807787457 24.034970473633404 31.41456894631321 19.56892677226593 32 28.323504238430786 23.966108186483137 25.47810828027967 22.23227929480641 33 27.64809104516694 22.794589503386444 30.661773614253946 18.89554583719267 34 19.910111656954818 22.76543441472918 35.588436450895564 21.73601747742044 35 21.78385370867579 28.406670496691717 30.020986974006636 19.788488820625858 36 27.27822005448015 23.739433234456158 26.914992984801057 22.06735372626264 37 20.773352405294816 28.245027806763513 28.265037733563137 22.716582054378538 38 23.51783892790564 23.24043568489055 33.42884946829091 19.812875918912898 39 20.46741938383495 26.839955759302462 28.17733797626166 24.51528688060092 40 27.471128255032774 22.92512301024336 29.962911288021793 19.640837446702076 41 19.618795261711867 22.867672634471006 27.720158047156207 29.79337405666092 42 17.825874554955 26.312193939962402 32.96705787636836 22.894873628714247 43 18.339723222067196 27.475583590296747 32.16290894310849 22.02178424452756 44 25.026712470639733 24.06482903627972 28.285594806798684 22.622863686281868 45 19.747843656814123 23.59076573143708 26.4642224853736 30.197168126375196 46 23.373548596373983 22.861263204793005 29.012205273710006 24.75298292512301 47 18.66668229942198 22.887448069940948 32.895616184591574 25.550253446045502 48 19.081497461631354 29.30907129708879 29.34885665935835 22.2605745819215 49 24.76869384421178 24.61009954156945 29.531369077628355 21.089837536590416 50 21.685680005315135 24.81684273057337 28.74848069159309 24.748996572518397 51 20.705193592133597 25.682193900880513 27.511304436185142 26.101308070800748 52 20.716761831064627 26.03447804184107 28.847748687825604 24.4010114392687 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 766.0 1 2170.5 2 3575.0 3 11737.0 4 19899.0 5 11741.5 6 3584.0 7 4052.0 8 4520.0 9 6085.0 10 7650.0 11 8964.0 12 10278.0 13 10603.5 14 10306.5 15 9684.0 16 8642.5 17 7601.0 18 6847.5 19 6094.0 20 6244.5 21 6395.0 22 6083.5 23 5772.0 24 5872.5 25 5973.0 26 7109.0 27 8245.0 28 9130.5 29 10016.0 30 11832.5 31 13649.0 32 14231.5 33 14814.0 34 18729.0 35 22644.0 36 23382.0 37 24120.0 38 25822.0 39 32545.0 40 37566.0 41 44449.5 42 51333.0 43 63303.0 44 75273.0 45 87292.5 46 99312.0 47 105771.0 48 112230.0 49 123846.5 50 135463.0 51 113575.5 52 91688.0 53 87291.0 54 82894.0 55 78775.0 56 74656.0 57 74071.5 58 73487.0 59 82702.0 60 91917.0 61 67360.5 62 42804.0 63 35195.0 64 22904.5 65 18223.0 66 16063.0 67 13903.0 68 11233.0 69 8563.0 70 7321.0 71 6079.0 72 5517.0 73 4955.0 74 4075.5 75 3196.0 76 2754.0 77 2312.0 78 1765.0 79 1218.0 80 837.5 81 457.0 82 354.5 83 252.0 84 204.5 85 157.0 86 112.5 87 68.0 88 45.5 89 15.0 90 7.0 91 8.0 92 9.0 93 5.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1279365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.31755738990689 #Duplication Level Percentage of deduplicated Percentage of total 1 70.32271594007891 14.287858169266734 2 11.261300771097188 4.576042494035397 3 4.798562541391604 2.9248520947134415 4 2.5570803855578186 2.078145099367049 5 1.5382099094148192 1.5626334056129538 6 1.046715886673898 1.276002605905452 7 0.7161415606607607 1.0185173080615748 8 0.5842145702067083 0.9495850446555669 9 0.4559212491965536 0.8336885531246119 >10 4.499561874761336 20.98883387990224 >50 1.5758057389809172 23.317340354637484 >100 0.6267672543522271 16.32363758233451 >500 0.006955493574808898 0.9174720142516501 >1k 0.008887575123366924 3.552358054838646 >5k 0.0 0.0 >10k+ 0.0011592489291348163 5.393033339292688 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 34169 2.6707780813137765 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 18296 1.430084455960574 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16227 1.2683636022558067 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 4346 0.3396997729342291 No Hit GGGGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCT 4125 0.32242557831424185 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCATGTGCTTTCG 2956 0.23105212351439974 No Hit CTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCTT 2735 0.21377792889441244 TruSeq Adapter, Index 13 (95% over 23bp) GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCATGTGCTTT 2531 0.19783251847596267 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2524 0.1972853720400355 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2476 0.19353351076510614 No Hit CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 2150 0.1680521196062109 TruSeq Adapter, Index 19 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 2091 0.16344045678911023 TruSeq Adapter, Index 19 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 1818 0.14210174578794948 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCG 1743 0.13623946254587238 No Hit AGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1520 0.11880894037276306 No Hit GGGGTTGGGGATTTAGCTCAGTGGCTGTCTCTTATACACATCTGACGCATGT 1517 0.11857444904307995 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1416 0.1106799076104161 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1415 0.11060174383385507 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1411 0.11028908872761096 No Hit CGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 1398 0.10927295963231759 TruSeq Adapter, Index 13 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGCTGTCTCTTATACACATCTGACGCA 1303 0.1018474008590199 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2190930657005624 0.0 2 0.0 0.0 0.0 0.6570447057720041 0.0 3 0.0 0.0 0.0 1.0205062667807858 0.0 4 0.0 0.0 0.0 1.4566601399913237 0.0 5 0.0 0.0 0.0 2.8685324360131785 0.0 6 0.0 0.0 0.0 4.22920745838756 0.0 7 0.0 0.0 0.0 5.435743513383593 0.0 8 0.0 0.0 0.0 7.450102199137854 0.0 9 0.0 0.0 0.0 8.631000535421869 0.0 10 0.0 0.0 0.0 9.725449734829388 0.0 11 0.0 0.0 0.0 11.27004412345187 0.0 12 0.0 0.0 0.0 12.198551625220324 0.0 13 7.816377656102832E-5 0.0 0.0 12.64893130576497 0.0 14 7.816377656102832E-5 0.0 0.0 12.989725371571053 0.0 15 7.816377656102832E-5 0.0 0.0 13.27760256064532 0.0 16 7.816377656102832E-5 0.0 0.0 13.703829634232608 0.0 17 7.816377656102832E-5 0.0 0.0 14.164370605730186 0.0 18 7.816377656102832E-5 0.0 0.0 14.810316055230524 0.0 19 1.5632755312205664E-4 0.0 0.0 15.175809874429893 0.0 20 1.5632755312205664E-4 0.0 0.0 15.766102715018778 0.0 21 2.3449132968308498E-4 0.0 0.0 16.217029541999352 0.0 22 2.3449132968308498E-4 0.0 0.0 16.7025047582199 0.0 23 2.3449132968308498E-4 0.0 0.0 17.100592872245215 0.0 24 6.253102124882266E-4 0.0 0.0 17.418172296412674 0.0 25 6.253102124882266E-4 0.0 0.0 17.827359666709658 0.0 26 6.253102124882266E-4 0.0 0.0 18.148847279705166 0.0 27 6.253102124882266E-4 0.0 0.0 18.63486964236164 0.0 28 6.253102124882266E-4 0.0 0.0 19.000676116667254 0.0 29 6.253102124882266E-4 0.0 0.0 19.493576891661096 0.0 30 6.253102124882266E-4 0.0 0.0 21.27391323039164 0.0 31 7.034739890492549E-4 0.0 0.0 21.867410785819526 0.0 32 7.034739890492549E-4 0.0 0.0 22.23071601927519 0.0 33 7.034739890492549E-4 0.0 0.0 22.688990241252498 0.0 34 7.816377656102832E-4 0.0 0.0 23.19689846134606 0.0 35 7.816377656102832E-4 0.0 0.0 23.67901263517448 0.0 36 7.816377656102832E-4 0.0 0.0 23.995497766470084 0.0 37 7.816377656102832E-4 0.0 0.0 24.390928312092328 0.0 38 7.816377656102832E-4 0.0 0.0 24.95230055535363 0.0 39 7.816377656102832E-4 0.0 0.0 27.01261954172578 0.0 40 7.816377656102832E-4 0.0 0.0 27.43900294286619 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAATCCG 25 3.417374E-5 46.0 17 GATCGTA 40 5.6115823E-9 46.0 9 CAACGGT 20 6.311724E-4 46.0 14 ACGCATA 20 6.311724E-4 46.0 19 CTATCGA 20 6.311724E-4 46.0 20 TTTCGCG 20 6.311724E-4 46.0 1 TTAGACG 30 1.8615701E-6 46.0 1 GACCGTA 20 6.311724E-4 46.0 18 CGCATAT 30 1.8615701E-6 46.0 30 ATTACGT 20 6.311724E-4 46.0 38 CCAATCG 30 1.8615701E-6 46.0 43 CTAAGCG 25 3.417374E-5 46.0 1 TCGATTG 20 6.311724E-4 46.0 23 CCGCTAG 30 1.8615701E-6 46.0 1 ATCGTAC 30 1.8615701E-6 46.0 10 ATGTACG 20 6.311724E-4 46.0 39 CGTTAGT 25 3.417374E-5 46.0 16 TATTGCG 65 0.0 46.0 1 ACGATTT 25 3.417374E-5 46.0 15 GTTACCG 30 1.8615701E-6 46.0 38 >>END_MODULE