##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933103.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1242688 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.506356382293866 33.0 31.0 34.0 31.0 34.0 2 32.85503119045167 34.0 31.0 34.0 31.0 34.0 3 32.895169986352165 34.0 31.0 34.0 31.0 34.0 4 36.35148725987537 37.0 37.0 37.0 35.0 37.0 5 36.3386626409847 37.0 37.0 37.0 35.0 37.0 6 36.48148368697533 37.0 37.0 37.0 35.0 37.0 7 36.545839341813874 37.0 37.0 37.0 35.0 37.0 8 36.39211934129886 37.0 37.0 37.0 35.0 37.0 9 38.028472955399906 39.0 39.0 39.0 35.0 39.0 10 37.9063441507442 39.0 38.0 39.0 35.0 39.0 11 37.53545700932173 39.0 37.0 39.0 35.0 39.0 12 37.388690483854354 39.0 37.0 39.0 35.0 39.0 13 37.248506463408354 39.0 37.0 39.0 34.0 39.0 14 38.74375305788742 41.0 38.0 41.0 35.0 41.0 15 38.85161923185868 41.0 38.0 41.0 35.0 41.0 16 38.872836142297984 41.0 38.0 41.0 35.0 41.0 17 38.886075990111756 41.0 38.0 41.0 35.0 41.0 18 38.77738096770871 40.0 38.0 41.0 35.0 41.0 19 38.62458959932018 40.0 37.0 41.0 35.0 41.0 20 38.49850968223721 40.0 35.0 41.0 35.0 41.0 21 38.465761317402276 40.0 35.0 41.0 35.0 41.0 22 38.433676836019984 40.0 35.0 41.0 35.0 41.0 23 38.3582307063398 40.0 35.0 41.0 35.0 41.0 24 38.26059397048978 40.0 35.0 41.0 35.0 41.0 25 38.18382570685482 40.0 35.0 41.0 35.0 41.0 26 38.0873236081784 40.0 35.0 41.0 35.0 41.0 27 38.0110574818458 40.0 35.0 41.0 35.0 41.0 28 37.944257931194315 40.0 35.0 41.0 34.0 41.0 29 37.89172825359221 40.0 35.0 41.0 34.0 41.0 30 37.74108303934696 40.0 35.0 41.0 34.0 41.0 31 37.65049795282484 40.0 35.0 41.0 34.0 41.0 32 37.52862182623474 40.0 35.0 41.0 34.0 41.0 33 37.34689962404079 40.0 35.0 41.0 33.0 41.0 34 37.20206198176855 40.0 35.0 41.0 33.0 41.0 35 37.06623142735747 40.0 35.0 41.0 33.0 41.0 36 36.99042237472318 39.0 35.0 41.0 33.0 41.0 37 36.913583296853275 39.0 35.0 41.0 33.0 41.0 38 36.90317601843745 39.0 35.0 41.0 33.0 41.0 39 36.81445463382603 39.0 35.0 41.0 33.0 41.0 40 36.75542292192409 39.0 35.0 41.0 33.0 41.0 41 36.724660574496575 39.0 35.0 41.0 33.0 41.0 42 36.691413291188134 39.0 35.0 41.0 33.0 41.0 43 36.60388206854818 39.0 35.0 41.0 33.0 41.0 44 36.51004194134006 39.0 35.0 41.0 32.0 41.0 45 36.45368749034351 38.0 35.0 41.0 32.0 41.0 46 36.36189775712005 38.0 35.0 41.0 32.0 41.0 47 36.265839052119276 38.0 35.0 41.0 32.0 41.0 48 36.20585778570325 38.0 35.0 41.0 31.0 41.0 49 36.1285230081887 38.0 35.0 41.0 31.0 41.0 50 36.03079292630169 37.0 35.0 41.0 31.0 41.0 51 35.91878975253644 37.0 35.0 40.0 31.0 41.0 52 35.70697954756142 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 5.0 14 4.0 15 20.0 16 36.0 17 80.0 18 216.0 19 358.0 20 687.0 21 1102.0 22 1745.0 23 2858.0 24 4727.0 25 7754.0 26 10729.0 27 11950.0 28 12138.0 29 13068.0 30 14688.0 31 17827.0 32 22649.0 33 31314.0 34 73969.0 35 142766.0 36 105280.0 37 101362.0 38 142293.0 39 515902.0 40 7157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.393981433795126 21.822291677396098 24.03459275377247 20.74913413503631 2 30.862533475820157 23.351798681567697 25.342161507956945 20.443506334655197 3 26.649488849976827 23.526339676572075 29.176108564659835 20.648062908791264 4 22.79558505433383 27.35658508008446 27.293496034402843 22.554333831178862 5 21.60300896121955 36.9109543183808 24.041432765102744 17.444603955296905 6 84.85991656795592 2.6678458309728588 10.12273394448164 2.3495036565895866 7 86.53459275377247 1.9978466034917857 8.230947751969923 3.2366128907658234 8 79.02844479064737 4.330049054951846 12.138525518875213 4.502980635525571 9 38.967705490034504 28.62238952979348 17.594279497347685 14.815625482824329 10 30.444809960344028 22.7297600041201 28.233957356955248 18.591472678580626 11 29.85254544986352 21.012031982283567 30.935198537364165 18.200224030488744 12 20.936148091878252 28.60822668280373 32.75230790029356 17.70331732502446 13 15.917350131328217 34.2602487510944 32.15304243703971 17.669358680537673 14 14.174998068702681 30.880961271051138 37.51834732450945 17.425693335736725 15 17.19804166452078 23.87783578822681 39.94936782201164 18.974754725240768 16 17.15321947262708 26.80503875469949 29.189708116598855 26.852033656074575 17 19.04001648040377 30.11415576556626 31.54774166967091 19.298086084359067 18 21.501615852088378 34.19627452747592 26.97394679919658 17.328162821239122 19 20.56381006334655 29.60364950816295 27.032368543029307 22.800171885461193 20 19.441082556522634 30.94453314106196 29.744714683009732 19.869669619405673 21 16.696065303599937 28.09924936910954 29.379779960859043 25.824905366431476 22 14.561257532059535 33.4224680692177 28.498062265025492 23.518212133697276 23 14.872598753669465 33.61471262295927 33.08400821445125 18.428680408920016 24 20.896315084719575 30.558997914198898 28.905324586702374 19.639362414379153 25 16.09301771643405 32.55282098161405 26.302177215841787 25.051984086110107 26 14.887646778596075 31.727754673739504 31.19737214811763 22.187226399546788 27 17.53038574445074 29.351615208322603 33.630806767265796 19.48719227996086 28 16.35140920327548 32.51234420868311 28.7056767265798 22.430569861461606 29 21.023458824741205 30.067241334912705 29.95772068290673 18.951579157439358 30 24.845979038986453 29.515373126641602 26.675159010145748 18.963488824226193 31 24.84799080702477 31.384547046402638 24.5175780244116 19.249884122160992 32 23.715284930730803 30.206375212442705 23.499864809187827 22.578475047638666 33 18.654964077869906 28.091363238399342 27.77366482978833 25.48000785394242 34 19.56468558479683 30.572436524694858 26.45853182777978 23.404346062728536 35 26.236271694906527 31.3970200082402 23.81627568625431 18.55043261059896 36 19.340976978935984 33.29427820981614 24.70193644744296 22.662808363804913 37 18.837310732862957 34.97748429211516 26.402685147036102 19.782519827985787 38 16.926452979347996 32.73500669516403 24.72688237111809 25.611657954369882 39 21.59552518411701 29.48487472318072 28.56139272287171 20.35820736983056 40 16.37152688365865 28.32191185559046 31.172345753720965 24.13421550702992 41 18.269267909563787 33.02341376113715 25.213166941340067 23.494151387959008 42 19.060938868002268 28.64701357058248 28.459355847968276 23.83269171344698 43 20.950632821754134 29.32683022609054 30.020165962816087 19.702370989339236 44 19.72884585672349 32.57543325436473 24.722697893598394 22.973022995313386 45 21.18287132409744 30.820044934850905 26.395201369933563 21.60188237111809 46 21.971725807282276 29.96512398928774 27.391750785394244 20.67139941803574 47 18.13383568522429 32.129705927795236 28.72724287995056 21.00921550702992 48 18.96815612607509 29.98073530926508 27.24770819385075 23.803400370809086 49 17.75900306432508 29.5367783385693 31.203326981511047 21.500891615594583 50 17.272477081938508 29.85335015707885 30.81360727712829 22.060565483854354 51 17.37387019106968 27.96993291960653 29.290698872122366 25.36549801720142 52 18.37363843539167 28.03447043827574 28.85897345109955 24.732917675233043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2783.0 1 2453.0 2 2123.0 3 17289.5 4 32456.0 5 18458.5 6 4461.0 7 5636.5 8 6812.0 9 9160.0 10 11508.0 11 14070.0 12 16632.0 13 17342.0 14 16721.0 15 15390.0 16 13222.0 17 11054.0 18 10210.0 19 9366.0 20 8645.5 21 7925.0 22 7302.0 23 6679.0 24 6963.0 25 7247.0 26 8127.5 27 9008.0 28 10558.0 29 12108.0 30 13372.0 31 14636.0 32 16439.0 33 18242.0 34 22170.0 35 26098.0 36 29993.5 37 33889.0 38 35816.5 39 38673.5 40 39603.0 41 45911.5 42 52220.0 43 62725.0 44 73230.0 45 77592.5 46 81955.0 47 90120.5 48 98286.0 49 117293.5 50 136301.0 51 131673.0 52 127045.0 53 109850.0 54 92655.0 55 79782.5 56 66910.0 57 59723.0 58 52536.0 59 45144.5 60 37753.0 61 32455.5 62 27158.0 63 23392.5 64 15903.0 65 12179.0 66 9581.0 67 6983.0 68 6015.5 69 5048.0 70 4180.5 71 3313.0 72 3004.5 73 2696.0 74 2067.5 75 1439.0 76 1061.0 77 683.0 78 581.0 79 479.0 80 372.5 81 266.0 82 158.0 83 50.0 84 46.0 85 42.0 86 25.0 87 8.0 88 6.5 89 3.0 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1242688.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.319682589862573 #Duplication Level Percentage of deduplicated Percentage of total 1 72.50929871584403 18.359124282987008 2 11.058947389229964 5.6001807534658425 3 4.4401356619827475 3.372684768519975 4 2.3729154339276652 2.4032586239853804 5 1.4410957911944007 1.8244044007314548 6 0.9678895121478943 1.470399313778497 7 0.6759066803910849 1.1979619825508971 8 0.537065010939132 1.0878652485679914 9 0.42723865419489226 0.9735792402901258 >10 4.059209594600611 22.995636864838858 >50 1.149091022585346 20.982166510459553 >100 0.35034798113138244 12.087763634469445 >500 0.004151799229430073 0.737553799132797 >1k 0.005429275915408558 2.6540939365351015 >5k 6.387383429892421E-4 1.071195612006596 >10k+ 6.387383429892421E-4 3.182131027680498 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29047 2.337433048359685 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 10305 0.8292507853942421 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 7232 0.581964258124324 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 6015 0.4840313900190555 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3130 0.2518733583972807 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2739 0.22040930627800379 No Hit CTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGCTT 2692 0.21662718236596795 RNA PCR Primer, Index 34 (96% over 27bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2534 0.2039128083638049 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTC 2403 0.19337114384302417 RNA PCR Primer, Index 34 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGCT 2350 0.18910619560179226 RNA PCR Primer, Index 34 (96% over 26bp) CGCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 2244 0.1805762991193284 RNA PCR Primer, Index 34 (96% over 25bp) CGTTTTCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTT 2153 0.17325346345985476 RNA PCR Primer, Index 34 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCT 2094 0.1685056908894268 TruSeq Adapter, Index 3 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCG 1833 0.14750283256939795 No Hit GCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGCT 1778 0.1430769428851007 TruSeq Adapter, Index 18 (95% over 24bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1380 0.11104959571509503 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22419143019003965 0.0 2 0.0 0.0 0.0 0.6666999278982335 0.0 3 0.0 0.0 0.0 1.2696670443425864 0.0 4 0.0 0.0 0.0 1.6754004223103467 0.0 5 0.0 0.0 0.0 3.736175130040686 0.0 6 0.0 0.0 0.0 4.556332723901735 0.0 7 0.0 0.0 0.0 6.142008291703147 0.0 8 0.0 0.0 0.0 7.957991064531081 0.0 9 0.0 0.0 0.0 9.38280565998867 0.0 10 0.0 0.0 0.0 10.40285252613689 0.0 11 0.0 0.0 0.0 11.37775531750528 0.0 12 0.0 0.0 0.0 12.02095779471597 0.0 13 8.047072153267755E-5 0.0 0.0 12.326746536540146 0.0 14 8.047072153267755E-5 0.0 0.0 12.516013673585002 0.0 15 8.047072153267755E-5 0.0 0.0 13.017748622341248 0.0 16 8.047072153267755E-5 0.0 0.0 13.691208090848226 0.0 17 8.047072153267755E-5 0.0 0.0 14.48923623628779 0.0 18 8.047072153267755E-5 0.0 0.0 14.883381830354844 0.0 19 8.047072153267755E-5 0.0 0.0 15.258214451254055 0.0 20 8.047072153267755E-5 0.0 0.0 15.71577097388886 0.0 21 8.047072153267755E-5 0.0 0.0 16.190467760210126 0.0 22 8.047072153267755E-5 0.0 0.0 16.69461683061235 0.0 23 8.047072153267755E-5 0.0 0.0 17.058505433383118 0.0 24 8.047072153267755E-5 0.0 0.0 17.346349204305504 0.0 25 1.609414430653551E-4 0.0 0.0 17.621317659782665 0.0 26 1.609414430653551E-4 0.0 0.0 17.947626435597673 0.0 27 1.609414430653551E-4 0.0 0.0 18.291477828706803 0.0 28 1.609414430653551E-4 0.0 0.0 18.651986661173197 0.0 29 1.609414430653551E-4 0.0 0.0 18.9871472163568 0.0 30 1.609414430653551E-4 0.0 0.0 19.30782304166452 0.0 31 1.609414430653551E-4 0.0 0.0 19.572652186228563 0.0 32 1.609414430653551E-4 0.0 0.0 19.907490858526035 0.0 33 1.609414430653551E-4 0.0 0.0 20.25842367513004 0.0 34 1.609414430653551E-4 0.0 0.0 20.714692666220323 0.0 35 1.609414430653551E-4 0.0 0.0 21.01331951382809 0.0 36 1.609414430653551E-4 0.0 0.0 21.31419954163877 0.0 37 1.609414430653551E-4 0.0 0.0 21.692653345006953 0.0 38 1.609414430653551E-4 0.0 0.0 22.435719987639697 0.0 39 1.609414430653551E-4 0.0 0.0 22.82680769428851 0.0 40 1.609414430653551E-4 0.0 0.0 23.189811119122417 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 20 6.311654E-4 46.0 41 GCGACTA 20 6.311654E-4 46.0 8 CCTAGCG 20 6.311654E-4 46.0 32 TTTCGAT 20 6.311654E-4 46.0 38 CGTTGGC 25 3.417318E-5 46.0 41 AGCTTCG 20 6.311654E-4 46.0 26 TTATCGT 25 3.417318E-5 46.0 44 GCGTTAG 20 6.311654E-4 46.0 11 CGCCTAT 30 1.8615265E-6 46.0 36 CACTCGA 30 1.8615265E-6 46.0 37 CCGTAAG 20 6.311654E-4 46.0 28 TGTTCGG 25 3.417318E-5 46.0 1 CTACCCG 20 6.311654E-4 46.0 33 TTACGAG 25 3.417318E-5 46.0 40 CGGTCGA 20 6.311654E-4 46.0 10 CGCGTTC 20 6.311654E-4 46.0 28 ATCGGAC 25 3.417318E-5 46.0 16 TTCGCGA 25 3.417318E-5 46.0 14 CGTCCCA 20 6.311654E-4 46.0 13 TCGACGA 20 6.311654E-4 46.0 29 >>END_MODULE