##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933101.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1368302 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.558230566059244 33.0 31.0 34.0 31.0 34.0 2 32.92945197770668 34.0 31.0 34.0 31.0 34.0 3 33.01197542647749 34.0 33.0 34.0 31.0 34.0 4 36.40629846335093 37.0 37.0 37.0 35.0 37.0 5 36.38414692078211 37.0 37.0 37.0 35.0 37.0 6 36.52425487940528 37.0 37.0 37.0 35.0 37.0 7 36.576924538588706 37.0 37.0 37.0 35.0 37.0 8 36.4397713370294 37.0 37.0 37.0 35.0 37.0 9 38.082426978839464 39.0 39.0 39.0 35.0 39.0 10 37.93537610849067 39.0 38.0 39.0 35.0 39.0 11 37.385028305154854 39.0 35.0 39.0 35.0 39.0 12 37.2045162544526 39.0 35.0 39.0 35.0 39.0 13 37.19922283238642 39.0 35.0 39.0 35.0 39.0 14 38.56750044946218 40.0 36.0 41.0 35.0 41.0 15 38.64663283397963 41.0 36.0 41.0 35.0 41.0 16 38.63429929942367 40.0 36.0 41.0 35.0 41.0 17 38.648000222173174 40.0 36.0 41.0 35.0 41.0 18 38.594184617138616 40.0 36.0 41.0 35.0 41.0 19 38.483043217067575 40.0 36.0 41.0 35.0 41.0 20 38.387621299976175 40.0 35.0 41.0 35.0 41.0 21 38.33669321538666 40.0 35.0 41.0 35.0 41.0 22 38.32250555798355 40.0 35.0 41.0 35.0 41.0 23 38.29454316371678 40.0 35.0 41.0 35.0 41.0 24 38.2379577023201 40.0 35.0 41.0 35.0 41.0 25 38.186885643666386 40.0 35.0 41.0 35.0 41.0 26 38.117094033334745 40.0 35.0 41.0 35.0 41.0 27 38.093043787117175 40.0 35.0 41.0 35.0 41.0 28 38.09734619988862 40.0 35.0 41.0 35.0 41.0 29 38.08692160064079 40.0 36.0 41.0 35.0 41.0 30 38.00287144212316 40.0 35.0 41.0 35.0 41.0 31 37.92224450450266 40.0 35.0 41.0 34.0 41.0 32 37.843220283241564 40.0 35.0 41.0 34.0 41.0 33 37.709470570093444 40.0 35.0 41.0 34.0 41.0 34 37.60150975442556 40.0 35.0 41.0 34.0 41.0 35 37.483086336203556 40.0 35.0 41.0 34.0 41.0 36 37.429673420049085 40.0 35.0 41.0 34.0 41.0 37 37.31670201461373 40.0 35.0 41.0 33.0 41.0 38 37.34180246758391 40.0 35.0 41.0 34.0 41.0 39 37.225127201451144 40.0 35.0 41.0 33.0 41.0 40 37.22235149842652 39.0 35.0 41.0 33.0 41.0 41 37.17566151332089 39.0 35.0 41.0 33.0 41.0 42 37.12979810012702 39.0 35.0 41.0 33.0 41.0 43 37.04052248699483 39.0 35.0 41.0 33.0 41.0 44 36.95920710486428 39.0 35.0 41.0 33.0 41.0 45 36.89132954567047 39.0 35.0 41.0 33.0 41.0 46 36.82247705550383 39.0 35.0 41.0 33.0 41.0 47 36.75146495437411 38.0 35.0 41.0 33.0 41.0 48 36.71047838854288 38.0 35.0 41.0 33.0 41.0 49 36.6176165787962 38.0 35.0 41.0 33.0 41.0 50 36.51999631660262 38.0 35.0 41.0 33.0 41.0 51 36.39546752105895 38.0 35.0 41.0 32.0 41.0 52 36.16204536717771 37.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 10.0 13 7.0 14 7.0 15 14.0 16 39.0 17 90.0 18 165.0 19 314.0 20 575.0 21 927.0 22 1571.0 23 2370.0 24 4014.0 25 6329.0 26 8558.0 27 10186.0 28 10715.0 29 11699.0 30 14221.0 31 17338.0 32 22859.0 33 31526.0 34 81254.0 35 208336.0 36 69126.0 37 98773.0 38 163455.0 39 596814.0 40 7008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.7515416918195 22.47179350757362 25.530986580447884 19.245678220159 2 27.694251707590865 24.369035490703077 27.349883285999727 20.586829515706327 3 28.139694307250885 24.874917964016717 25.318021898674413 21.66736583005798 4 24.671015609127224 27.468132035179366 24.102354597157646 23.758497758535764 5 21.743007026226664 38.03582834783549 21.591505384045334 18.629659241892508 6 88.95426594421407 3.092445965875954 5.87713823410329 2.076149855806686 7 91.22247866333602 2.1042869191158093 4.4316240128275775 2.2416104047205954 8 84.85648636046722 3.9479588570359465 7.5546918735776165 3.64086290891923 9 46.42556979380283 25.016261030094235 13.535389117314745 15.022780058788191 10 37.32450877072459 22.723930828135895 22.17982579869064 17.771734602448873 11 34.12411879833546 20.20833120173763 27.65105948832933 18.016490511597585 12 21.97387711192412 32.57950364758657 27.052580497580216 18.394038742909093 13 17.466319569802575 36.341246303813044 28.44372075755206 17.74871336883232 14 16.50900166776048 26.053751291746995 38.86481200787546 18.57243503261707 15 18.112083443567283 20.7701223852629 39.922619421735845 21.19517474943397 16 18.284998487176075 21.72290912386301 28.08751284438669 31.904579544574226 17 21.31466591439609 24.401630634172868 31.71909417657798 22.56460927485307 18 25.412006998455016 28.344108245109634 26.07648019223826 20.167404564197085 19 27.089926054335955 23.393519851611703 25.7271421075172 23.789411986535136 20 22.935799260689528 27.6878203788345 28.63066779117476 20.745712569301222 21 20.930540187765565 24.117921336079316 26.540339778791523 28.411198697363595 22 17.907888755552502 29.690886953318785 25.151611267103313 27.2496130240254 23 18.650487977069393 26.423918111644944 34.58965930035913 20.335934610926536 24 21.43291466357573 24.127860662339163 31.617873831946458 22.821350842138653 25 17.413991940375737 31.12178451833002 26.856936553480153 24.607286987814096 26 17.088479005365777 29.864094330052872 29.326128296238696 23.721298368342662 27 18.90854504341878 26.690525921909053 34.37508678639657 20.025842248275598 28 18.00421252033542 26.462944583871106 30.970575209273974 24.562267686519494 29 20.160023152783523 28.466668907887293 30.160008536127258 21.213299403201923 30 27.018669855046618 26.52396912377531 25.615543936937897 20.841817084240173 31 26.644410371394617 27.686870296177307 24.938573502048524 20.730145830379552 32 25.17185533602962 27.0368675920959 23.912776565407345 23.87850050646714 33 19.977241866196206 26.296607035581328 27.808261626453813 25.917889471768657 34 21.17039951706568 25.33680430197427 28.26152413721532 25.231272043744728 35 27.388178925412664 24.859278141813725 26.99499087189816 20.75755206087545 36 22.778889455690337 28.759440532864822 26.9441979913791 21.517472020065746 37 22.1676208907098 28.874839034072885 27.4033071646464 21.55423291057091 38 21.116098639043134 26.877180622406456 26.695057085351042 25.311663653199368 39 23.777133995272973 23.87908517271772 30.155404289403947 22.188376542605358 40 19.451334573800228 23.560807482558673 31.042123741688606 25.94573420195249 41 22.001721842107955 27.647039907856595 24.909413272800887 25.441824977234557 42 21.567460984490268 23.587409796960028 28.17652828103737 26.66860093751233 43 21.665173331618313 25.377438606389525 30.403814362618782 22.553573699373384 44 20.84561741486894 30.28929286078658 25.43670914754199 23.42838057680249 45 23.549406490672382 27.618829761266156 27.309175898303153 21.522587849758313 46 24.403165383080637 26.197798439233445 26.39885054615136 23.00018563153456 47 21.673212492563778 25.593692035822503 30.520674529453295 22.21242094216043 48 22.012099668055736 23.946541041378293 29.137500347145583 24.903858943420385 49 21.07202942040573 26.6772978479897 29.870964158497177 22.379708573107397 50 20.210304450333332 27.09635738309233 29.394972747244395 23.298365419329944 51 20.965620162800317 22.831144001835852 30.72574621684394 25.47748961851989 52 23.14284419667588 23.299023168861847 29.45512028777273 24.10301234668955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1947.0 1 1852.5 2 1758.0 3 4906.5 4 8055.0 5 5232.0 6 2409.0 7 2622.0 8 2835.0 9 3132.0 10 3429.0 11 3523.5 12 3618.0 13 3741.5 14 3833.5 15 3802.0 16 3590.5 17 3379.0 18 3350.0 19 3321.0 20 3453.5 21 3586.0 22 3907.0 23 4228.0 24 4335.0 25 4442.0 26 5952.0 27 7462.0 28 8702.0 29 9942.0 30 11902.0 31 13862.0 32 15336.0 33 16810.0 34 20902.5 35 24995.0 36 31877.0 37 38759.0 38 39848.0 39 44451.5 40 47966.0 41 58776.5 42 69587.0 43 87818.0 44 106049.0 45 116156.0 46 126263.0 47 132739.0 48 139215.0 49 143003.0 50 146791.0 51 130979.0 52 115167.0 53 101545.5 54 87924.0 55 81046.0 56 74168.0 57 67707.5 58 61247.0 59 56165.5 60 51084.0 61 46791.5 62 42499.0 63 36977.0 64 26856.0 65 22257.0 66 18057.5 67 13858.0 68 11684.0 69 9510.0 70 8129.0 71 6748.0 72 6655.0 73 6562.0 74 4879.5 75 3197.0 76 2282.0 77 1367.0 78 1054.5 79 742.0 80 689.0 81 636.0 82 445.0 83 254.0 84 237.5 85 221.0 86 148.0 87 75.0 88 42.0 89 5.5 90 2.0 91 3.0 92 4.0 93 3.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1368302.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.48336223047856 #Duplication Level Percentage of deduplicated Percentage of total 1 71.39661305573699 13.910460741942382 2 11.95934834205028 4.660166315772775 3 4.599250847885672 2.6882661077457657 4 2.36393514615958 1.842296189679455 5 1.3306340398094494 1.2962612496906263 6 0.826898914020644 0.966646264191213 7 0.5840689059292801 0.7965738243245628 8 0.4761245640015973 0.7421205877817434 9 0.3455160409017696 0.605863276319702 >10 3.5676457900211322 15.903611840346791 >50 1.3364680145979797 19.00978631724795 >100 1.202557142793725 34.06552665186837 >500 0.006789845850152757 0.8975075487796851 >1k 0.0033949229250763787 1.5950381863057244 >5k 7.544273166836398E-4 1.01987489800325 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 8326 0.6084914002902868 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5551 0.40568529462063196 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4426 0.3234666031329341 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4280 0.31279644405986395 No Hit CTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGCTT 2350 0.1717457111076356 TruSeq Adapter, Index 15 (95% over 23bp) TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2328 0.17013787891854282 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2044 0.14938222702298176 No Hit CCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGCT 1799 0.13147682309899422 TruSeq Adapter, Index 14 (95% over 22bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1796 0.13125757325502702 No Hit GCTGTCTCTTATACACATCTGACGCATGCTGTGTCGTATGCCGTCTTCTGCT 1649 0.12051433090063451 TruSeq Adapter, Index 14 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17788470673871704 0.0 2 0.0 0.0 0.0 0.5325578709963151 0.0 3 0.0 0.0 0.0 0.9349544179574392 0.0 4 0.0 0.0 0.0 1.2060933916635364 0.0 5 0.0 0.0 0.0 2.6603776066979368 0.0 6 0.0 0.0 0.0 2.9253045014916297 0.0 7 0.0 0.0 0.0 3.7208891019672556 0.0 8 0.0 0.0 0.0 4.728122885152547 0.0 9 7.308328132239812E-5 0.0 0.0 5.650433895441211 0.0 10 7.308328132239812E-5 0.0 0.0 6.3454559008172176 0.0 11 7.308328132239812E-5 0.0 0.0 7.080673710920542 0.0 12 7.308328132239812E-5 0.0 0.0 7.631210069122168 0.0 13 1.4616656264479624E-4 0.0 0.0 7.852506244966389 0.0 14 1.4616656264479624E-4 0.0 0.0 8.000719139488213 0.0 15 1.4616656264479624E-4 0.0 0.0 8.518514187657404 0.0 16 1.4616656264479624E-4 0.0 0.0 9.182548881752712 0.0 17 1.4616656264479624E-4 0.0 0.0 10.05282459573983 0.0 18 1.4616656264479624E-4 0.0 0.0 10.443820150814659 0.0 19 1.4616656264479624E-4 0.0 0.0 10.904756406115025 0.0 20 1.4616656264479624E-4 0.0 0.0 11.416047042246522 0.0 21 2.192498439671944E-4 0.0 0.0 11.915644353366435 0.0 22 2.192498439671944E-4 0.0 0.0 12.48291678299089 0.0 23 2.192498439671944E-4 0.0 0.0 12.909650062632371 0.0 24 3.6541640661199063E-4 0.0 0.0 13.24970657062549 0.0 25 3.6541640661199063E-4 0.0 0.0 13.579969918921408 0.0 26 3.6541640661199063E-4 0.0 0.0 13.915349096909893 0.0 27 3.6541640661199063E-4 0.0 0.0 14.300571072760253 0.0 28 5.115829692567869E-4 0.0 0.0 14.694709208931947 0.0 29 5.115829692567869E-4 0.0 0.0 15.106094999495726 0.0 30 5.115829692567869E-4 0.0 0.0 15.491901641596666 0.0 31 5.84666250579185E-4 0.0 0.0 15.817999242857205 0.0 32 5.84666250579185E-4 0.0 0.0 16.186923646972673 0.0 33 5.84666250579185E-4 0.0 0.0 16.53925814622795 0.0 34 5.84666250579185E-4 0.0 0.0 17.007941229348493 0.0 35 5.84666250579185E-4 0.0 0.0 17.353990566410047 0.0 36 5.84666250579185E-4 0.0 0.0 17.72371888662006 0.0 37 5.84666250579185E-4 0.0 0.0 18.101778700900823 0.0 38 5.84666250579185E-4 0.0 0.0 18.517476405062624 0.0 39 5.84666250579185E-4 0.0 0.0 18.937705272666413 0.0 40 5.84666250579185E-4 0.0 0.0 19.325192830237768 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 35 1.01976184E-7 46.000004 20 TCGCATA 20 6.3118787E-4 46.0 39 TTTACGG 80 0.0 46.0 1 CGTGCTA 20 6.3118787E-4 46.0 32 GAATCGC 20 6.3118787E-4 46.0 24 CCGTGCT 20 6.3118787E-4 46.0 31 TAACGTT 20 6.3118787E-4 46.0 23 CGCGACA 20 6.3118787E-4 46.0 3 CGTTAGT 20 6.3118787E-4 46.0 44 CGTAGCA 30 1.8616647E-6 46.0 32 CGAGGTA 30 1.8616647E-6 46.0 44 TATTCGA 25 3.4175006E-5 46.0 39 CCGAGTA 20 6.3118787E-4 46.0 20 CGTACAG 30 1.8616647E-6 46.0 29 ACGTCGG 20 6.3118787E-4 46.0 1 CGTAAGA 20 6.3118787E-4 46.0 28 GTATACG 20 6.3118787E-4 46.0 15 TATAGCG 25 3.4175006E-5 46.0 19 ACCGTAG 20 6.3118787E-4 46.0 38 CGCACGA 25 3.4175006E-5 46.0 38 >>END_MODULE