##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933099.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1090800 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.520027502750274 33.0 31.0 34.0 31.0 34.0 2 32.9192968463513 34.0 31.0 34.0 31.0 34.0 3 32.98566098276494 34.0 31.0 34.0 31.0 34.0 4 36.404528786211955 37.0 37.0 37.0 35.0 37.0 5 36.31338375504217 37.0 37.0 37.0 35.0 37.0 6 36.39015126512651 37.0 37.0 37.0 35.0 37.0 7 36.541729922992296 37.0 37.0 37.0 35.0 37.0 8 36.48780161349468 37.0 37.0 37.0 35.0 37.0 9 38.317015034836814 39.0 39.0 39.0 37.0 39.0 10 38.034256508984235 39.0 39.0 39.0 35.0 39.0 11 37.76667675100843 39.0 38.0 39.0 35.0 39.0 12 37.355446461312795 39.0 37.0 39.0 35.0 39.0 13 37.24212962962963 39.0 37.0 39.0 35.0 39.0 14 38.20991474147415 40.0 37.0 41.0 33.0 41.0 15 38.41018701870187 40.0 37.0 41.0 33.0 41.0 16 38.595174184085074 41.0 37.0 41.0 35.0 41.0 17 38.60595709570957 40.0 37.0 41.0 35.0 41.0 18 38.53114136413642 40.0 37.0 41.0 35.0 41.0 19 38.50024202420242 40.0 36.0 41.0 35.0 41.0 20 38.377214888155486 40.0 35.0 41.0 34.0 41.0 21 38.32786762009534 40.0 35.0 41.0 35.0 41.0 22 38.25109552621929 40.0 35.0 41.0 34.0 41.0 23 38.232641180784746 40.0 35.0 41.0 34.0 41.0 24 38.19760726072607 40.0 35.0 41.0 34.0 41.0 25 38.087495416208284 40.0 35.0 41.0 34.0 41.0 26 37.96440410707737 40.0 35.0 41.0 34.0 41.0 27 37.85730748074808 40.0 35.0 41.0 34.0 41.0 28 37.85536303630363 40.0 35.0 41.0 34.0 41.0 29 37.8231967363403 40.0 35.0 41.0 34.0 41.0 30 37.795138430509716 40.0 35.0 41.0 34.0 41.0 31 37.68984506784012 40.0 35.0 41.0 34.0 41.0 32 37.582506417308394 40.0 35.0 41.0 34.0 41.0 33 37.476000183351665 40.0 35.0 41.0 33.0 41.0 34 37.321581408140815 40.0 35.0 41.0 33.0 41.0 35 37.22215071507151 40.0 35.0 41.0 33.0 41.0 36 37.155841584158416 40.0 35.0 41.0 33.0 41.0 37 37.03395856252292 40.0 35.0 41.0 33.0 41.0 38 37.00643839383938 40.0 35.0 41.0 33.0 41.0 39 36.956963696369634 40.0 35.0 41.0 33.0 41.0 40 36.891499816648334 40.0 35.0 41.0 33.0 41.0 41 36.76971672167217 39.0 35.0 41.0 32.0 41.0 42 36.77834800146681 39.0 35.0 41.0 32.0 41.0 43 36.73739457279061 39.0 35.0 41.0 32.0 41.0 44 36.70371928859553 39.0 35.0 41.0 32.0 41.0 45 36.64073432343234 39.0 35.0 41.0 32.0 41.0 46 36.574017235056836 39.0 35.0 41.0 32.0 41.0 47 36.479867070040335 39.0 35.0 41.0 32.0 41.0 48 36.36636046938027 38.0 35.0 41.0 32.0 41.0 49 36.3216804180418 38.0 35.0 41.0 31.0 41.0 50 36.207891455812245 38.0 35.0 41.0 31.0 41.0 51 36.120980014668135 38.0 35.0 41.0 31.0 41.0 52 35.86369086908691 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 5.0 14 9.0 15 16.0 16 55.0 17 113.0 18 230.0 19 392.0 20 716.0 21 1192.0 22 1935.0 23 2993.0 24 4671.0 25 6919.0 26 9002.0 27 10012.0 28 10701.0 29 11641.0 30 13314.0 31 15952.0 32 20491.0 33 29132.0 34 77309.0 35 121067.0 36 59048.0 37 78075.0 38 130688.0 39 482056.0 40 3062.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.99193252658599 22.244682801613493 26.175559222588923 12.587825449211588 2 36.60973597359736 23.554822148881556 25.834250091675838 14.001191785845252 3 33.37788778877888 23.83874220755409 29.03171983865053 13.751650165016502 4 29.215438210487715 27.108452511917857 28.708470847084712 14.967638430509716 5 26.045287862119544 32.00889255592226 26.426017601760176 15.51980198019802 6 29.237807114044738 38.80436376971031 23.248533186651997 8.70929592959296 7 88.71883021635497 1.9317015034836817 7.4159332599926655 1.9335350201686836 8 86.58489182251559 2.445086175284195 7.937660432709938 3.0323615694902823 9 80.77631096442978 4.522827282728273 10.385863586358637 4.314998166483315 10 46.07636596993033 26.579941327466077 15.357810781078108 11.985881921525486 11 33.889255592225894 22.953612027869454 25.93848551521819 17.21864686468647 12 32.77997799779978 19.18967730106344 29.830858085808583 18.1994866153282 13 30.894481114778145 21.43976897689769 30.51567656765676 17.150073340667397 14 20.93060139347268 23.11927026035937 35.00898423175651 20.941144114411443 15 17.500091675834252 27.338008800880086 36.12156215621562 19.04033736707004 16 28.42125045837917 24.615236523652364 30.248533186652 16.714979831316466 17 26.88201320132013 23.12981298129813 27.395764576457648 22.59240924092409 18 23.482398239823983 22.683626696002936 33.37752108544188 20.456453978731208 19 23.408140814081406 24.875779244591126 28.16905023835717 23.547029702970296 20 21.303355335533553 32.19444444444444 27.41070773744041 19.09149248258159 21 25.787953795379536 25.874587458745875 31.493582691602494 16.843876054272094 22 22.90942427576091 22.71140447378071 33.35973597359736 21.01943527686102 23 23.176292629262925 22.37962962962963 32.973230656398975 21.47084708470847 24 23.353868720205355 24.61853685368537 30.07874954162083 21.94884488448845 25 24.466629996332966 23.783461679501283 30.148514851485146 21.601393472680602 26 21.520352035203523 27.074990832416574 27.413274660799413 23.99138247158049 27 23.522827282728272 24.611844517785112 30.502016868353504 21.363311331133115 28 19.244591125779245 28.3506600660066 27.686010267693433 24.718738540520718 29 21.320040337367068 27.09259259259259 27.921525485881922 23.665841584158414 30 24.308030803080307 24.635863586358635 28.10276861019435 22.9533370003667 31 23.20966263292996 26.195636230289697 28.902365236523654 21.692335900256694 32 25.841309130913093 24.785295196186286 26.703337000366705 22.67005867253392 33 25.268243491015767 25.851485148514854 27.699578291162453 21.18069306930693 34 21.359644297763108 24.88879721305464 30.194902823615692 23.556655665566556 35 21.747799779977996 28.224422442244222 27.825265859919323 22.202511917858452 36 24.625595892922625 27.11175284195086 25.962229556288964 22.30042170883755 37 22.18986065273194 28.52805280528053 26.507609094242756 22.774477447744772 38 23.682526585991933 26.804455445544555 27.729281261459484 21.783736707004035 39 22.002658599193254 28.04400440044004 26.16052438577191 23.792812614594794 40 26.001100110011 24.914283094976163 28.17601760176018 20.90859919325266 41 22.252108544187752 24.77860286028603 26.95819581958196 26.01109277594426 42 20.806288962229555 26.298679867986795 29.913091309130913 22.98193986065273 43 20.776585991932524 25.87119545287862 29.601576824349102 23.75064173083975 44 22.645031169783643 24.80812247891456 27.334983498349835 25.21186285295196 45 20.95782911624496 24.943344334433444 26.52933626696003 27.56949028236157 46 23.621470480381372 24.196461312797947 27.90474880821415 24.27731939860653 47 19.905207187385404 24.666299963329667 30.68885221855519 24.73964063072974 48 20.67803447011368 26.99028236156949 28.711587825449215 23.62009534286762 49 24.096076274294095 24.515951595159517 29.2033370003667 22.184635130179682 50 23.062339567290064 24.983590025669233 28.33901723505684 23.615053171983867 51 21.608635863586358 25.213879721305467 27.0490465713238 26.12843784378438 52 21.92106710671067 26.250275027502752 28.585900256692337 23.24275760909424 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 701.0 1 2259.5 2 3818.0 3 7611.0 4 11404.0 5 7165.5 6 2927.0 7 3040.0 8 3153.0 9 3784.5 10 4416.0 11 5204.0 12 5992.0 13 5928.0 14 5628.5 15 5393.0 16 5139.5 17 4886.0 18 4709.5 19 4533.0 20 4424.0 21 4315.0 22 4737.0 23 5159.0 24 5188.5 25 5218.0 26 6213.5 27 7209.0 28 7739.0 29 8269.0 30 11024.0 31 13779.0 32 14703.0 33 15627.0 34 18583.0 35 21539.0 36 24990.5 37 28442.0 38 31314.0 39 35952.5 40 37719.0 41 43227.5 42 48736.0 43 55496.0 44 62256.0 45 71277.0 46 80298.0 47 85018.0 48 89738.0 49 90128.5 50 90519.0 51 79853.5 52 69188.0 53 67710.5 54 66233.0 55 64373.5 56 62514.0 57 62583.5 58 62653.0 59 66107.0 60 69561.0 61 58088.5 62 46616.0 63 40921.5 64 29812.0 65 24397.0 66 20626.5 67 16856.0 68 14463.0 69 12070.0 70 9284.5 71 6499.0 72 5469.0 73 4439.0 74 3940.5 75 3442.0 76 2928.0 77 2414.0 78 1888.5 79 1363.0 80 997.0 81 631.0 82 443.5 83 256.0 84 198.5 85 141.0 86 136.5 87 132.0 88 93.5 89 31.0 90 7.0 91 6.5 92 6.0 93 5.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1090800.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.7755303306906 #Duplication Level Percentage of deduplicated Percentage of total 1 73.02002478648765 14.44009714912966 2 10.904806749251717 4.312966732402939 3 3.977651486204211 2.3598050283104377 4 1.9354971876300413 1.5310193335577693 5 1.0924578191578709 1.0801966368878293 6 0.7655767701026711 0.908381198258251 7 0.5781993222163935 0.8003938763572527 8 0.4827629721177157 0.7637515038118582 9 0.3540232700044481 0.6300898122368909 >10 4.133763391110803 20.400267534067137 >50 1.9036431387213324 27.31257043920086 >100 0.8404307724414349 21.38640809599102 >500 0.006511361823010563 0.8499451547376089 >1k 0.0032556809115052814 0.8526124428544134 >5k 9.301945461443662E-4 1.292623006674857 >10k+ 4.650972730721831E-4 1.0788720555212803 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 11730 1.0753575357535754 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8050 0.737990465713238 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6004 0.5504217088375505 No Hit GGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAG 1551 0.14218921892189218 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1478 0.13549688302163548 No Hit GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT 1450 0.13292995966263293 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCTT 1449 0.13283828382838284 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT 1160 0.10634396773010633 Illumina Single End Adapter 1 (95% over 21bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1113 0.10203520352035204 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.167583425009168E-5 0.0 0.0 0.13586358635863585 0.0 2 9.167583425009168E-5 0.0 0.0 0.46076274294096076 0.0 3 9.167583425009168E-5 0.0 0.0 0.7137880454712138 0.0 4 9.167583425009168E-5 0.0 0.0 1.0070590392372571 0.0 5 9.167583425009168E-5 0.0 0.0 1.8942060872753943 0.0 6 1.8335166850018335E-4 0.0 0.0 2.6105610561056105 0.0 7 1.8335166850018335E-4 0.0 0.0 3.173725705903924 0.0 8 1.8335166850018335E-4 0.0 0.0 4.251558489182251 0.0 9 1.8335166850018335E-4 0.0 0.0 4.7757609094242754 0.0 10 1.8335166850018335E-4 0.0 0.0 5.4277594426109275 0.0 11 1.8335166850018335E-4 0.0 0.0 6.4836817015034836 0.0 12 2.75027502750275E-4 0.0 0.0 7.136780344701137 0.0 13 2.75027502750275E-4 0.0 0.0 7.421342134213421 0.0 14 2.75027502750275E-4 0.0 0.0 7.5504217088375505 0.0 15 2.75027502750275E-4 0.0 0.0 7.763568023469014 0.0 16 2.75027502750275E-4 0.0 0.0 8.15887422075541 0.0 17 2.75027502750275E-4 0.0 0.0 8.576090942427577 0.0 18 2.75027502750275E-4 0.0 0.0 9.027961129446277 0.0 19 2.75027502750275E-4 0.0 0.0 9.316923359002567 0.0 20 2.75027502750275E-4 0.0 0.0 9.72992299229923 0.0 21 3.667033370003667E-4 0.0 0.0 10.117345067840118 0.0 22 3.667033370003667E-4 0.0 0.0 10.54088742207554 0.0 23 3.667033370003667E-4 0.0 0.0 10.912266226622663 0.0 24 3.667033370003667E-4 0.0 0.0 11.208654198753209 0.0 25 4.583791712504584E-4 0.0 0.0 11.526494316098276 0.0 26 4.583791712504584E-4 0.0 0.0 11.794462779611294 0.0 27 4.583791712504584E-4 0.0 0.0 12.156032269893656 0.0 28 4.583791712504584E-4 0.0 0.0 12.442427576090942 0.0 29 4.583791712504584E-4 0.0 0.0 12.796021268793545 0.0 30 4.583791712504584E-4 0.0 0.0 13.661441144114411 0.0 31 4.583791712504584E-4 0.0 0.0 14.02988632196553 0.0 32 4.583791712504584E-4 0.0 0.0 14.330033003300331 0.0 33 4.583791712504584E-4 0.0 0.0 14.655573890722406 0.0 34 4.583791712504584E-4 0.0 0.0 14.994774477447745 0.0 35 4.583791712504584E-4 0.0 0.0 15.34030069673634 0.0 36 4.583791712504584E-4 0.0 0.0 15.615511551155116 0.0 37 5.5005500550055E-4 0.0 0.0 15.943711037770443 0.0 38 5.5005500550055E-4 0.0 0.0 16.335716905023837 0.0 39 5.5005500550055E-4 0.0 0.0 17.426017601760176 0.0 40 5.5005500550055E-4 0.0 0.0 17.773102310231025 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 35 1.0195072E-7 46.000004 1 TATCTCG 35 1.0195072E-7 46.000004 41 GATACCG 20 6.3113135E-4 46.0 16 ACACGAT 20 6.3113135E-4 46.0 34 ATTAGGC 20 6.3113135E-4 46.0 33 CGAAATT 20 6.3113135E-4 46.0 31 CAACGTA 20 6.3113135E-4 46.0 32 CGCATTG 40 5.6115823E-9 46.0 12 CGGTTAT 20 6.3113135E-4 46.0 10 ATTACGA 30 1.8613155E-6 46.0 26 CACGATT 20 6.3113135E-4 46.0 35 CTGCGAT 25 3.4170414E-5 46.0 33 TAACCGA 30 1.8613155E-6 46.0 26 CGGATTA 25 3.4170414E-5 46.0 37 TATTCGC 30 1.8613155E-6 46.0 22 GTCGTGA 25 3.4170414E-5 46.0 22 GCGATCA 25 3.4170414E-5 46.0 35 GCGATAA 60 0.0 46.0 9 CGTCGTT 25 3.4170414E-5 46.0 44 AATTACG 20 6.3113135E-4 46.0 1 >>END_MODULE