##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933096.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1556274 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.49173410337768 33.0 31.0 34.0 31.0 34.0 2 32.87547758299631 34.0 31.0 34.0 31.0 34.0 3 32.899089106416994 34.0 31.0 34.0 31.0 34.0 4 36.3423580937547 37.0 37.0 37.0 35.0 37.0 5 36.214927448508426 37.0 37.0 37.0 35.0 37.0 6 36.30653149766686 37.0 37.0 37.0 35.0 37.0 7 36.52710512416194 37.0 37.0 37.0 35.0 37.0 8 36.48329278777388 37.0 37.0 37.0 35.0 37.0 9 38.31810465252263 39.0 39.0 39.0 37.0 39.0 10 38.03734111088407 39.0 39.0 39.0 35.0 39.0 11 37.687508754885066 39.0 37.0 39.0 35.0 39.0 12 37.247707023313374 39.0 35.0 39.0 35.0 39.0 13 37.13528723091178 39.0 35.0 39.0 34.0 39.0 14 37.810467822504265 40.0 36.0 41.0 32.0 41.0 15 38.1617215220456 40.0 36.0 41.0 33.0 41.0 16 38.41960541652691 40.0 36.0 41.0 34.0 41.0 17 38.47641417899419 40.0 36.0 41.0 35.0 41.0 18 38.42364390846342 40.0 36.0 41.0 35.0 41.0 19 38.355703430115774 40.0 36.0 41.0 35.0 41.0 20 38.179044949668246 40.0 35.0 41.0 34.0 41.0 21 38.145575907584394 40.0 35.0 41.0 34.0 41.0 22 38.101392171301455 40.0 35.0 41.0 34.0 41.0 23 38.06987137226478 40.0 35.0 41.0 34.0 41.0 24 38.0145803373956 40.0 35.0 41.0 34.0 41.0 25 37.863254157044324 40.0 35.0 41.0 34.0 41.0 26 37.77736182703046 40.0 35.0 41.0 34.0 41.0 27 37.66567712369416 40.0 35.0 41.0 34.0 41.0 28 37.654886607371196 40.0 35.0 41.0 34.0 41.0 29 37.59569266080395 40.0 35.0 41.0 34.0 41.0 30 37.54099792195976 40.0 35.0 41.0 34.0 41.0 31 37.403090972412315 40.0 35.0 41.0 33.0 41.0 32 37.28230697165152 40.0 35.0 41.0 33.0 41.0 33 37.177749547958776 40.0 35.0 41.0 33.0 41.0 34 37.009029258343965 39.0 35.0 41.0 33.0 41.0 35 36.90230255083616 39.0 35.0 41.0 33.0 41.0 36 36.82226523092977 39.0 35.0 41.0 33.0 41.0 37 36.704034765086355 39.0 35.0 41.0 32.0 41.0 38 36.66206272160301 39.0 35.0 41.0 32.0 41.0 39 36.61853953738223 39.0 35.0 41.0 32.0 41.0 40 36.52768921153987 39.0 35.0 41.0 32.0 41.0 41 36.33951476410966 39.0 35.0 41.0 31.0 41.0 42 36.36643354576379 39.0 35.0 41.0 31.0 41.0 43 36.31143873122599 38.0 35.0 41.0 31.0 41.0 44 36.27283884457364 38.0 35.0 41.0 31.0 41.0 45 36.20033618758651 38.0 35.0 41.0 31.0 41.0 46 36.13179234504978 38.0 35.0 41.0 31.0 41.0 47 36.038711049596664 38.0 35.0 41.0 31.0 41.0 48 35.89989166432132 37.0 35.0 41.0 31.0 41.0 49 35.86685763560915 37.0 35.0 41.0 31.0 41.0 50 35.735089707853504 37.0 35.0 40.0 31.0 41.0 51 35.63944973700004 37.0 35.0 40.0 30.0 41.0 52 35.38833136067299 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 3.0 12 4.0 13 8.0 14 7.0 15 32.0 16 60.0 17 174.0 18 316.0 19 596.0 20 1031.0 21 1670.0 22 2721.0 23 4303.0 24 6883.0 25 10730.0 26 13948.0 27 15665.0 28 16645.0 29 18001.0 30 20957.0 31 25797.0 32 32910.0 33 46966.0 34 125824.0 35 180108.0 36 108634.0 37 119972.0 38 184064.0 39 614407.0 40 3835.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.33153673453389 22.84835446714396 26.361167763517223 13.458941034804925 2 38.72679232577297 23.48371816273998 24.826348059531934 12.963141451955117 3 34.0046804097479 23.228621695151368 28.9224134053515 13.844284489749233 4 29.339756366809443 26.364958869710602 29.987714245691954 14.307570517788 5 25.45412954274119 31.346922200075305 28.654529986364867 14.544418270818635 6 27.386180068548338 37.459470504551255 25.79892743822746 9.355421988672946 7 86.2906531883203 1.998748292395812 9.264628208143296 2.445970311140583 8 84.49463269321468 2.065510315021648 9.692380647623748 3.7474763441399133 9 78.75611878114009 3.9272004801211096 12.357785325720277 4.9588954130185305 10 49.911069644548455 21.665272310659947 16.950871119095996 11.472786925695603 11 34.158830642933054 23.735473316395442 26.580666386510345 15.525029654161157 12 32.63281401604088 18.560099314131058 31.083986495951226 17.723100173876837 13 29.487480996277004 20.180251035486037 34.30610548014039 16.026162488096567 14 18.76160624671491 23.01876147773464 39.188343440807984 19.03128883474247 15 15.691838326669982 28.251516121197167 38.795417773476906 17.261227778655943 16 28.059711850226886 25.345151303690738 30.892889041389882 15.70224780469249 17 26.082810610470908 24.169394335444785 27.020306192868347 22.727488861215956 18 23.492971032093322 24.395704098378562 33.72034744524422 18.3909774242839 19 23.293327524587575 26.160560415453833 27.85769086934563 22.688421190612964 20 18.41198914844044 37.42747099803762 25.820967258978815 18.33957259454312 21 23.152221266949134 27.47633128870623 33.294908223102105 16.07653922124253 22 19.947901205057722 23.701803152915232 36.1037323761754 20.246563265851645 23 21.225054199967357 24.847873831985883 34.27307787703194 19.65399409101482 24 21.81261140390445 29.519159222604756 29.13696431348207 19.531265060008714 25 23.80956052725934 25.66533913693861 30.357893275862736 20.167207059939315 26 18.876560297222724 29.632442616145998 26.720101987182204 24.77089509944907 27 22.34208115023447 26.578738705395068 31.262361255151728 19.816818889218737 28 17.941056651977735 29.70884304434823 27.203114618633993 25.146985685040036 29 21.86562263457463 30.47952995423685 26.117380358471582 21.537467052716938 30 25.462675595685592 25.53496363750856 26.79406068597175 22.208300080834096 31 22.814298767440693 26.28283965419971 31.589617252488956 19.313244325870638 32 27.01587252630321 25.215161340483743 26.414371762298927 21.35459437091412 33 26.079919088797986 24.168944543184555 29.600764389818245 20.15037197819921 34 20.300602593116636 24.078664810952315 34.13550570143818 21.48522689449287 35 22.60707304754818 29.84294539393449 27.89405978638723 19.6559217721301 36 26.105235967445324 25.120447941686365 26.477021398545503 22.297294692322815 37 21.69367347909173 28.27060016423843 27.69081794079963 22.34490841587021 38 24.174663330493214 25.016738697684342 30.146105377330727 20.662492594491717 39 21.635200485261592 26.99543910648125 25.438836605893307 25.930523802363854 40 27.286968747148638 24.251513550955682 28.089012603179132 20.37250509871655 41 20.92504276239274 24.96173552986171 26.934652895312777 27.178568812432776 42 19.07067778553134 27.48892547199272 31.07370553000307 22.366691212472865 43 19.463089404565007 27.097991741814102 31.552027470741013 21.886891382879877 44 24.313327858718967 25.918700691523473 26.891986886627933 22.875984563129627 45 20.361902852582514 25.162278621887918 26.07876248012882 28.39705604540075 46 23.017797637177 24.586673040865552 28.472364120970983 23.92316520098646 47 19.950085910321704 25.00369472213762 31.257927588586586 23.78829177895409 48 19.19578428991296 29.643109118317213 28.291290608209096 22.869815983560734 49 24.485791062499278 25.305055536492933 28.273363173836998 21.93579022717079 50 21.468391812752767 25.561244356713537 28.429762368323313 24.540601462210383 51 19.987547179995296 26.80774722189023 26.997623811745232 26.20708178636924 52 20.63415568209711 27.335353543142144 28.059197801929482 23.97129297283126 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1126.0 1 2852.0 2 4578.0 3 16639.5 4 28701.0 5 16748.0 6 4795.0 7 5452.0 8 6109.0 9 8877.0 10 11645.0 11 13828.0 12 16011.0 13 16565.5 14 16161.0 15 15202.0 16 13568.0 17 11934.0 18 10767.5 19 9601.0 20 8795.5 21 7990.0 22 7640.0 23 7290.0 24 7902.5 25 8515.0 26 9969.5 27 11424.0 28 12200.0 29 12976.0 30 14886.5 31 16797.0 32 18750.5 33 20704.0 34 23233.0 35 25762.0 36 27239.5 37 28717.0 38 32698.0 39 41597.0 40 46515.0 41 51452.5 42 56390.0 43 63041.0 44 69692.0 45 83315.0 46 96938.0 47 115832.0 48 134726.0 49 149229.5 50 163733.0 51 150199.0 52 136665.0 53 123263.5 54 109862.0 55 100863.0 56 91864.0 57 86255.0 58 80646.0 59 87548.0 60 94450.0 61 71364.5 62 48279.0 63 42717.5 64 32494.5 65 27833.0 66 23791.5 67 19750.0 68 16234.0 69 12718.0 70 10932.0 71 9146.0 72 7480.0 73 5814.0 74 5248.0 75 4682.0 76 3634.0 77 2586.0 78 2248.5 79 1911.0 80 1263.0 81 615.0 82 521.5 83 428.0 84 263.0 85 98.0 86 81.0 87 64.0 88 43.5 89 15.5 90 8.0 91 5.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1556274.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.767131911121233 #Duplication Level Percentage of deduplicated Percentage of total 1 69.7937872507718 15.19210573664281 2 11.686646050486257 5.087695323590366 3 5.008528287531318 3.27063887745829 4 2.784526307526678 2.424446057836821 5 1.7110807992098604 1.8622660733493883 6 1.0833028984283049 1.4148238253873326 7 0.8095625642736172 1.2335298588794572 8 0.6049541431121638 1.0534493306641424 9 0.4479935158446263 0.8776380559245264 >10 4.144495698858937 19.893826878310765 >50 1.196620212958983 18.81106841187743 >100 0.7145950383689136 21.183225936020982 >500 0.007101565597545482 1.1006146917772412 >1k 0.005917971331287903 2.3558745073230427 >5k 0.0 0.0 >10k+ 8.876956996931852E-4 4.238796434957399 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 28208 1.8125342966598426 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24147 1.5515905296882169 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 13456 0.864629236239891 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 3318 0.21320153134987796 No Hit GGGGCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCT 3230 0.20754700007839236 TruSeq Adapter, Index 14 (95% over 23bp) CTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGCTT 2830 0.1818445852080032 Illumina PCR Primer Index 3 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGCT 2417 0.15530684185432642 TruSeq Adapter, Index 14 (96% over 26bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCATTGCGTCTCG 2311 0.1484957019136733 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2133 0.1370581272963501 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCG 2006 0.12889761057500157 No Hit CGCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGC 1998 0.1283835622775938 Illumina PCR Primer Index 3 (95% over 23bp) GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCATTGCGTCT 1917 0.12317882326634 No Hit GCTGTCTCTTATACACATCTGACGCATTGCGTCTCGTATGCCGTCTTCTGCT 1837 0.11803834029226216 TruSeq Adapter, Index 14 (96% over 26bp) TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1564 0.10049644214322156 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18865572514865633 0.0 2 0.0 0.0 0.0 0.5657101512972651 0.0 3 0.0 0.0 0.0 0.9362104616539247 0.0 4 0.0 0.0 0.0 1.4006530983618566 0.0 5 0.0 0.0 0.0 2.820390239764977 0.0 6 0.0 0.0 0.0 4.2457819124395835 0.0 7 0.0 0.0 0.0 5.420832064276599 0.0 8 0.0 0.0 0.0 7.388416178642064 0.0 9 0.0 0.0 0.0 8.527418693623359 0.0 10 0.0 0.0 0.0 9.697071338337594 0.0 11 0.0 0.0 0.0 11.39163155074235 0.0 12 0.0 0.0 0.0 12.41600129540171 0.0 13 1.2851207435194575E-4 0.0 0.0 12.874789400838155 0.0 14 1.2851207435194575E-4 0.0 0.0 13.224085218926744 0.0 15 1.2851207435194575E-4 0.0 0.0 13.543823259914385 0.0 16 1.2851207435194575E-4 0.0 0.0 14.042771388585814 0.0 17 1.2851207435194575E-4 0.0 0.0 14.595630332447886 0.0 18 1.2851207435194575E-4 0.0 0.0 15.254318969538783 0.0 19 1.2851207435194575E-4 0.0 0.0 15.662152037494684 0.0 20 1.2851207435194575E-4 0.0 0.0 16.216039077951567 0.0 21 1.2851207435194575E-4 0.0 0.0 16.710746308169384 0.0 22 1.2851207435194575E-4 0.0 0.0 17.26032819413548 0.0 23 1.2851207435194575E-4 0.0 0.0 17.739421207319534 0.0 24 1.2851207435194575E-4 0.0 0.0 18.10760830033786 0.0 25 1.2851207435194575E-4 0.0 0.0 18.50072673578046 0.0 26 1.2851207435194575E-4 0.0 0.0 18.843982486374507 0.0 27 1.2851207435194575E-4 0.0 0.0 19.330143663647917 0.0 28 1.2851207435194575E-4 0.0 0.0 19.70713383375935 0.0 29 1.2851207435194575E-4 0.0 0.0 20.188154528058682 0.0 30 1.2851207435194575E-4 0.0 0.0 21.438898291688997 0.0 31 1.2851207435194575E-4 0.0 0.0 21.96027177733484 0.0 32 1.927681115279186E-4 0.0 0.0 22.32376817963932 0.0 33 1.927681115279186E-4 0.0 0.0 22.748243561223795 0.0 34 1.927681115279186E-4 0.0 0.0 23.22335270010294 0.0 35 1.927681115279186E-4 0.0 0.0 23.688373641145454 0.0 36 1.927681115279186E-4 0.0 0.0 24.033814097003486 0.0 37 1.927681115279186E-4 0.0 0.0 24.46355847363639 0.0 38 2.570241487038915E-4 0.0 0.0 24.97291608033033 0.0 39 2.570241487038915E-4 0.0 0.0 26.737965165517124 0.0 40 2.570241487038915E-4 0.0 0.0 27.19919500036626 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAC 20 6.312146E-4 46.0 26 AGCGTTA 20 6.312146E-4 46.0 10 AGCCGTA 20 6.312146E-4 46.0 13 AGCGTAC 20 6.312146E-4 46.0 41 ACTATCG 25 3.4177174E-5 46.0 45 ACCGGTA 50 1.6370905E-11 46.0 41 ACCGGAA 20 6.312146E-4 46.0 32 CCGATTA 20 6.312146E-4 46.0 12 CGAAAGT 25 3.4177174E-5 46.0 16 GCGAATC 20 6.312146E-4 46.0 8 CGTTGAT 25 3.4177174E-5 46.0 25 ATTCGCG 20 6.312146E-4 46.0 12 TACGGTG 20 6.312146E-4 46.0 43 TGCGGTA 20 6.312146E-4 46.0 31 TACGGAT 20 6.312146E-4 46.0 11 CGCGAAT 30 1.8618302E-6 46.0 34 TATTGCG 55 1.8189894E-12 46.0 1 ATATCCG 25 3.4177174E-5 46.0 44 TAATTCG 25 3.4177174E-5 46.0 14 CGAATCG 20 6.312146E-4 46.0 9 >>END_MODULE