##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933095.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1026819 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28899640540348 33.0 31.0 34.0 31.0 34.0 2 32.63298302816757 34.0 31.0 34.0 31.0 34.0 3 32.665969367532156 34.0 31.0 34.0 31.0 34.0 4 36.15400182505388 37.0 35.0 37.0 35.0 37.0 5 36.03398262011124 37.0 35.0 37.0 35.0 37.0 6 36.13909364746854 37.0 36.0 37.0 35.0 37.0 7 36.44157538962563 37.0 37.0 37.0 35.0 37.0 8 36.3324685265855 37.0 37.0 37.0 35.0 37.0 9 38.1638584794399 39.0 39.0 39.0 37.0 39.0 10 37.85053354096486 39.0 38.0 39.0 35.0 39.0 11 37.55939849184715 39.0 37.0 39.0 35.0 39.0 12 37.20887322887481 39.0 35.0 39.0 35.0 39.0 13 37.097523516802866 39.0 35.0 39.0 33.0 39.0 14 37.88038982527593 40.0 36.0 41.0 33.0 41.0 15 38.185486439187436 40.0 36.0 41.0 33.0 41.0 16 38.42705384298498 40.0 36.0 41.0 34.0 41.0 17 38.48217845598884 40.0 36.0 41.0 35.0 41.0 18 38.487741266961365 40.0 36.0 41.0 35.0 41.0 19 38.46171233683833 40.0 36.0 41.0 35.0 41.0 20 38.30855973642872 40.0 36.0 41.0 34.0 41.0 21 38.25011126595827 40.0 35.0 41.0 34.0 41.0 22 38.218476674077905 40.0 35.0 41.0 34.0 41.0 23 38.21846790914465 40.0 35.0 41.0 34.0 41.0 24 38.14253144906746 40.0 35.0 41.0 34.0 41.0 25 38.002145460884535 40.0 35.0 41.0 34.0 41.0 26 37.90785425668984 40.0 35.0 41.0 34.0 41.0 27 37.77923957386842 40.0 35.0 41.0 34.0 41.0 28 37.800857794801225 40.0 35.0 41.0 34.0 41.0 29 37.77352775903056 40.0 35.0 41.0 34.0 41.0 30 37.687172714957555 40.0 35.0 41.0 34.0 41.0 31 37.58832958875907 40.0 35.0 41.0 34.0 41.0 32 37.54689482761811 40.0 35.0 41.0 34.0 41.0 33 37.41754389040327 40.0 35.0 41.0 33.0 41.0 34 37.36756331933866 40.0 35.0 41.0 33.0 41.0 35 37.337182112913766 40.0 35.0 41.0 33.0 41.0 36 37.23674182109992 40.0 35.0 41.0 33.0 41.0 37 37.14892790258069 40.0 35.0 41.0 33.0 41.0 38 37.19989306781429 40.0 35.0 41.0 33.0 41.0 39 37.1816269469108 40.0 35.0 41.0 33.0 41.0 40 37.13793472851593 40.0 35.0 41.0 33.0 41.0 41 36.984112097653046 40.0 35.0 41.0 33.0 41.0 42 36.99008686048856 39.0 35.0 41.0 33.0 41.0 43 36.92364379700804 39.0 35.0 41.0 33.0 41.0 44 36.898814688859474 39.0 35.0 41.0 33.0 41.0 45 36.83032647428612 39.0 35.0 41.0 32.0 41.0 46 36.741835708143306 39.0 35.0 41.0 32.0 41.0 47 36.629801357396 39.0 35.0 41.0 32.0 41.0 48 36.54538044192793 39.0 35.0 41.0 32.0 41.0 49 36.56171632975237 39.0 35.0 41.0 32.0 41.0 50 36.43889137228665 39.0 35.0 41.0 31.0 41.0 51 36.37846592242644 38.0 35.0 41.0 31.0 41.0 52 36.1151760923785 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 2.0 13 1.0 14 4.0 15 9.0 16 44.0 17 70.0 18 166.0 19 319.0 20 514.0 21 809.0 22 1327.0 23 2138.0 24 3356.0 25 5222.0 26 6669.0 27 7831.0 28 9459.0 29 11362.0 30 14161.0 31 17538.0 32 22521.0 33 31065.0 34 69892.0 35 119426.0 36 75672.0 37 76072.0 38 112209.0 39 435081.0 40 3877.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.15536818076019 25.053587828039802 27.00719406243944 12.78384992876057 2 33.149561899419474 25.066637839775076 27.645086427111305 14.138713833694155 3 30.941480436182033 23.81451843021993 31.204233657538477 14.03976747605956 4 26.968628356117293 27.33500256617768 30.764331396283083 14.932037681421944 5 22.48828664058612 31.050652549280837 29.710786419028086 16.750274391104956 6 24.068214553879503 37.28719472467884 26.81923493819261 11.825355783249043 7 83.28799915077536 1.1289234032482842 10.854006402296802 4.729071043679558 8 77.92999545197353 1.6372895320402134 12.164071759482441 8.268643256503823 9 72.27797693653896 3.1516752222154047 16.184741419860753 8.38560642138488 10 44.86730377992616 22.365285410573822 19.863578683292772 12.903832126207249 11 27.725723813057606 21.883993186725217 31.401834208365837 18.98844879185134 12 28.07145173589503 17.941623596758532 34.33594430956186 19.650980357784576 13 24.41063127970947 24.443938026078598 35.94226441076762 15.203166283444308 14 13.25218952902118 29.653424800281257 36.58434446577245 20.510041204925113 15 10.258477881690931 31.359372976152567 40.66646604708327 17.71568309507323 16 18.879958395783483 29.434885797789097 35.473243093476064 16.211912712951356 17 16.638764962471477 29.77749729991362 26.937756313430118 26.64598142418479 18 16.103324928736225 27.836259360218307 36.24884229839923 19.81157341264624 19 16.673629919197055 32.227880473579084 28.19776416291479 22.900725444309074 20 13.800776962638986 39.10718442101286 26.529018259303733 20.563020357044426 21 16.05404652621348 34.1383437587345 32.409119815663715 17.398489899388306 22 14.381794649300412 28.2088664117045 31.168200043045562 26.24113889594953 23 15.55317928476197 29.832716379420326 30.714371276729395 23.89973305908831 24 18.03229196187449 30.4545396997913 31.02036483547733 20.492803502856884 25 18.97676221417796 28.898764047022894 28.456914022821937 23.66755971597721 26 16.187760452426378 33.004745724416864 25.9168363655133 24.89065745764346 27 21.57468843096982 30.329493318686158 28.98923763584429 19.106580614499734 28 15.303281298846242 32.265667074723005 27.29244394581713 25.138607680613624 29 20.191874127767406 28.717914257527372 27.382722758343974 23.70748885636125 30 24.53645676599284 30.983162563217082 24.9568813977926 19.52349927299748 31 20.39619446075696 31.094087662966892 29.015629823756672 19.49408805251948 32 26.132745888028953 27.53893334657812 26.425786823188897 19.90253394220403 33 22.823009702781114 30.90155129579799 27.315817101163887 18.959621900257005 34 16.65756087489616 26.567291801184044 35.548134578732956 21.227012745186833 35 20.974095726705485 28.970052170830495 30.093619225978486 19.962232876485533 36 23.249667176006678 30.2535305638092 25.887132980593464 20.60966927959066 37 16.237428407538232 29.70737783387335 34.85064066792687 19.20455309066155 38 20.362303385504163 27.082669876580002 32.47066912474351 20.084357613172333 39 18.137081608345778 29.009494370478144 28.29193850133276 24.56148551984332 40 25.065566570155013 24.464973865890677 31.762754682178652 18.70670488177566 41 19.90565036291693 25.221484993947325 26.71356879839582 28.15929584473992 42 20.057283708229008 25.281183928228828 30.17581482228124 24.485717541260925 43 19.61445980255527 25.46700051323554 32.9756266683807 21.9429130158285 44 21.147057076271476 26.552488802797768 28.253664959452447 24.046789161478312 45 18.83106954584985 26.498827933647505 27.315524936722053 27.354577583780586 46 23.712066099283323 25.173277861044646 28.77556804071604 22.339087998956 47 18.104553967154875 24.52321197796301 32.79828285218719 24.573951202694925 48 16.440190530171332 27.060367990853308 30.709501869365486 25.789939609609874 49 24.39115365025384 21.718530724499644 31.204233657538477 22.686081967708038 50 19.532848535136182 22.46939334001416 32.43035043177035 25.567407693079307 51 17.4470865848801 23.372181465282587 27.617038640695196 31.563693309142117 52 18.04855578246994 24.117200791960414 34.27040208644367 23.56384133912598 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 925.0 1 1462.0 2 1999.0 3 9354.5 4 16710.0 5 9195.0 6 1680.0 7 2300.0 8 2920.0 9 4678.0 10 6436.0 11 8581.0 12 10726.0 13 11445.5 14 11024.5 15 9884.0 16 8555.5 17 7227.0 18 6561.0 19 5895.0 20 5103.5 21 4312.0 22 4261.0 23 4210.0 24 3990.5 25 3771.0 26 5111.0 27 6451.0 28 6612.0 29 6773.0 30 8565.5 31 10358.0 32 10671.0 33 10984.0 34 14497.5 35 18011.0 36 20050.5 37 22090.0 38 22383.5 39 30642.0 40 38607.0 41 50651.0 42 62695.0 43 80896.0 44 99097.0 45 125036.0 46 150975.0 47 147565.5 48 144156.0 49 128741.0 50 113326.0 51 88947.5 52 64569.0 53 54878.5 54 45188.0 55 39779.0 56 34370.0 57 31373.5 58 28377.0 59 30642.5 60 32908.0 61 21535.0 62 10162.0 63 8602.0 64 5601.0 65 4160.0 66 2926.5 67 1693.0 68 1461.5 69 1230.0 70 974.5 71 719.0 72 668.0 73 617.0 74 375.5 75 134.0 76 129.5 77 125.0 78 171.0 79 217.0 80 172.5 81 128.0 82 77.5 83 27.0 84 38.5 85 50.0 86 44.0 87 38.0 88 20.0 89 1.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1026819.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.001626922216296 #Duplication Level Percentage of deduplicated Percentage of total 1 62.483044390712 12.497625428673013 2 12.930321106893338 5.172549175290789 3 6.613786373221717 3.968594627412564 4 3.9601937404459475 3.168412709443845 5 2.6975288498419303 2.6977482833226762 6 1.915148756681528 2.2983654559014197 7 1.3368548399513147 1.8717490230505764 8 0.9998028125631233 1.5998146282136114 9 0.7413959786586273 1.334621319008517 >10 4.842709464114958 19.437446123823733 >50 0.6930922214828086 9.834137120186268 >100 0.7559234909241771 25.972468077605882 >500 0.020456692409030565 2.6913455055005047 >1k 0.006818897469676855 2.3599201305018545 >5k 0.0019482564199076726 2.416619004178872 >10k+ 9.741282099538363E-4 2.6785833878859187 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15460 1.5056207569201583 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 12035 1.1720663524925035 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6432 0.6264005632930438 No Hit CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCTT 6307 0.6142270448832754 Illumina Single End Adapter 2 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 6203 0.6040986775663482 Illumina Single End Adapter 2 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 5864 0.5710840956390562 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 2685 0.2614871754418257 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 2663 0.25934463620170645 Illumina Single End Adapter 2 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 2224 0.21659123954659976 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCG 2123 0.20675503667150685 No Hit ACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 1971 0.19195203828522847 Illumina Single End Adapter 2 (95% over 22bp) AGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1860 0.1811419539373541 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1601 0.1559184237923139 No Hit GGGGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 1583 0.1541654371413073 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGATTATGCTCG 1501 0.1461796090644992 No Hit ACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1378 0.13420086694928707 Illumina Single End Adapter 2 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1265 0.12319600630685641 Illumina Single End Adapter 2 (95% over 21bp) GGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1255 0.12222212483407494 Illumina Single End Adapter 2 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1060 0.10323143611483619 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGATTATGCT 1055 0.10274449537844549 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.634386391369852 0.0 2 0.0 0.0 0.0 2.3102416297322117 0.0 3 0.0 0.0 0.0 3.571320748836942 0.0 4 0.0 0.0 0.0 4.998836211640026 0.0 5 0.0 0.0 0.0 8.831936300360628 0.0 6 0.0 0.0 0.0 11.91758235872145 0.0 7 0.0 0.0 0.0 14.293853152308245 0.0 8 0.0 0.0 0.0 18.95913495952062 0.0 9 0.0 0.0 0.0 21.181727256702494 0.0 10 0.0 0.0 0.0 23.640875363622996 0.0 11 0.0 0.0 0.0 27.614896101455077 0.0 12 0.0 0.0 0.0 29.72412859520519 0.0 13 0.0 0.0 0.0 30.56488047065744 0.0 14 0.0 0.0 0.0 30.889962106271895 0.0 15 0.0 0.0 0.0 31.409333095706256 0.0 16 0.0 0.0 0.0 32.48927026087363 0.0 17 0.0 0.0 0.0 33.7902785203624 0.0 18 0.0 0.0 0.0 35.07560728813939 0.0 19 0.0 0.0 0.0 35.79881166982691 0.0 20 0.0 0.0 0.0 36.57850117693576 0.0 21 0.0 0.0 0.0 37.39422429853752 0.0 22 9.738814727814737E-5 0.0 0.0 38.255817237507294 0.0 23 9.738814727814737E-5 0.0 0.0 39.09617956037042 0.0 24 2.921644418344421E-4 0.0 0.0 39.64837035543752 0.0 25 2.921644418344421E-4 0.0 0.0 40.23445222575741 0.0 26 2.921644418344421E-4 0.0 0.0 40.74651910414591 0.0 27 2.921644418344421E-4 0.0 0.0 41.36892675340055 0.0 28 3.895525891125895E-4 0.0 0.0 41.85294584537294 0.0 29 3.895525891125895E-4 0.0 0.0 42.448279589684255 0.0 30 3.895525891125895E-4 0.0 0.0 43.61567131110741 0.0 31 3.895525891125895E-4 0.0 0.0 44.18471025565363 0.0 32 3.895525891125895E-4 0.0 0.0 44.58848151426882 0.0 33 3.895525891125895E-4 0.0 0.0 45.05974275894778 0.0 34 3.895525891125895E-4 0.0 0.0 45.571322696599886 0.0 35 3.895525891125895E-4 0.0 0.0 46.184965412599496 0.0 36 3.895525891125895E-4 0.0 0.0 46.62467289756033 0.0 37 3.895525891125895E-4 0.0 0.0 47.10469907549432 0.0 38 3.895525891125895E-4 0.0 0.0 47.62426484122324 0.0 39 3.895525891125895E-4 0.0 0.0 48.985653752024454 0.0 40 3.895525891125895E-4 0.0 0.0 49.43802169613145 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 20 6.3111365E-4 46.000004 20 TCACGAT 20 6.3111365E-4 46.000004 13 CGGGTGG 40 5.6097633E-9 46.000004 6 AACGTCA 20 6.3111365E-4 46.000004 35 CTATGCG 20 6.3111365E-4 46.000004 1 CAGCGCG 20 6.3111365E-4 46.000004 1 TCGTTGA 155 0.0 46.000004 24 GGTACCG 20 6.3111365E-4 46.000004 36 TCTTGAC 20 6.3111365E-4 46.000004 32 CGAACGT 20 6.3111365E-4 46.000004 33 ACGCCTA 20 6.3111365E-4 46.000004 30 TCCGCTC 40 5.6097633E-9 46.000004 38 CTACTTA 20 6.3111365E-4 46.000004 31 GCGACGT 20 6.3111365E-4 46.000004 32 ATGATGT 20 6.3111365E-4 46.000004 29 ACGCCCT 20 6.3111365E-4 46.000004 21 CTACTGA 20 6.3111365E-4 46.000004 19 TTAATCG 155 0.0 46.000004 20 CCGATAC 20 6.3111365E-4 46.000004 44 TCCGAAC 20 6.3111365E-4 46.000004 31 >>END_MODULE