##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933094.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1258631 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4591027870758 33.0 31.0 34.0 31.0 34.0 2 32.84569504485429 34.0 31.0 34.0 31.0 34.0 3 32.891387547263655 34.0 31.0 34.0 31.0 34.0 4 36.3384447069872 37.0 37.0 37.0 35.0 37.0 5 36.188704234998184 37.0 37.0 37.0 35.0 37.0 6 36.278658320031845 37.0 37.0 37.0 35.0 37.0 7 36.49486386399191 37.0 37.0 37.0 35.0 37.0 8 36.44515588762711 37.0 37.0 37.0 35.0 37.0 9 38.28349691053216 39.0 39.0 39.0 37.0 39.0 10 37.99371301040575 39.0 38.0 39.0 35.0 39.0 11 37.68816039013817 39.0 37.0 39.0 35.0 39.0 12 37.24546431797723 39.0 35.0 39.0 35.0 39.0 13 37.10860609662403 39.0 35.0 39.0 34.0 39.0 14 37.82285832781808 40.0 36.0 41.0 32.0 41.0 15 38.160170852299046 40.0 36.0 41.0 33.0 41.0 16 38.41085592202957 40.0 36.0 41.0 34.0 41.0 17 38.454164882320555 40.0 36.0 41.0 35.0 41.0 18 38.404709561420304 40.0 36.0 41.0 35.0 41.0 19 38.349996146606905 40.0 36.0 41.0 35.0 41.0 20 38.162399464179735 40.0 35.0 41.0 34.0 41.0 21 38.13288326761378 40.0 35.0 41.0 34.0 41.0 22 38.06876995719953 40.0 35.0 41.0 34.0 41.0 23 38.048476479603636 40.0 35.0 41.0 34.0 41.0 24 38.01006808190804 40.0 35.0 41.0 34.0 41.0 25 37.83733119556089 40.0 35.0 41.0 34.0 41.0 26 37.734163547536966 40.0 35.0 41.0 34.0 41.0 27 37.645557752828275 40.0 35.0 41.0 34.0 41.0 28 37.60914994148404 40.0 35.0 41.0 34.0 41.0 29 37.55013979474524 40.0 35.0 41.0 34.0 41.0 30 37.498417725290416 40.0 35.0 41.0 34.0 41.0 31 37.361426820092625 40.0 35.0 41.0 33.0 41.0 32 37.234840870755605 40.0 35.0 41.0 33.0 41.0 33 37.117967855550994 39.0 35.0 41.0 33.0 41.0 34 36.957696099968935 39.0 35.0 41.0 33.0 41.0 35 36.85531740438619 39.0 35.0 41.0 32.0 41.0 36 36.78559005776911 39.0 35.0 41.0 32.0 41.0 37 36.68025974252978 39.0 35.0 41.0 32.0 41.0 38 36.657645489424624 39.0 35.0 41.0 32.0 41.0 39 36.641192692695476 39.0 35.0 41.0 32.0 41.0 40 36.57575095480725 39.0 35.0 41.0 32.0 41.0 41 36.41046819917831 39.0 35.0 41.0 31.0 41.0 42 36.44550467929044 39.0 35.0 41.0 31.0 41.0 43 36.40844298289173 39.0 35.0 41.0 32.0 41.0 44 36.369005689515035 38.0 35.0 41.0 31.0 41.0 45 36.28763156159351 38.0 35.0 41.0 31.0 41.0 46 36.243356472230545 38.0 35.0 41.0 31.0 41.0 47 36.13424585919145 38.0 35.0 41.0 31.0 41.0 48 36.032719677173056 38.0 35.0 41.0 31.0 41.0 49 36.00515798514417 38.0 35.0 41.0 31.0 41.0 50 35.89195324125975 37.0 35.0 41.0 31.0 41.0 51 35.81860370513677 37.0 35.0 40.0 31.0 41.0 52 35.56143937341445 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 2.0 13 3.0 14 9.0 15 25.0 16 84.0 17 155.0 18 299.0 19 559.0 20 931.0 21 1450.0 22 2318.0 23 3590.0 24 5865.0 25 8907.0 26 11413.0 27 12757.0 28 13644.0 29 14782.0 30 17191.0 31 21079.0 32 27165.0 33 37718.0 34 101681.0 35 140438.0 36 80047.0 37 96278.0 38 150852.0 39 506429.0 40 2957.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.41171002462199 22.32830750235772 25.0447510032726 13.215231469747687 2 39.090726352680015 22.41800813741279 24.965220147922622 13.526045361984568 3 34.27692469039774 23.2561409976395 28.896952323596036 13.569981988366726 4 30.921294644737017 26.50077743198761 28.36740871629572 14.210519206979647 5 26.0633974532647 29.691466363056367 28.834741874306292 15.410394309372643 6 27.048833216407353 37.321105232590014 26.32669940594185 9.303362145060785 7 85.98143538495397 1.9956603643164676 9.360328801690091 2.662575449039472 8 83.80915454966546 2.327052170175373 9.996734547297818 3.8670587328613393 9 77.78475184545749 4.512760292730753 12.469897849329946 5.232590012481816 10 50.30997965249545 18.98745541783096 17.826670406179414 12.875894523494177 11 33.80275871164781 24.459670864614015 25.415391802680848 16.322178621057322 12 32.71189093546877 17.803391144823223 31.396731845950082 18.087986073757918 13 29.62409157251013 19.897730152840666 34.16164070327204 16.316537571377154 14 18.883374078661657 21.051285086733127 39.668576413579515 20.3967644210257 15 16.73103554576361 28.100134193421265 37.60156868851951 17.567261572295614 16 29.942771153737674 23.45683524400718 29.971770916177974 16.628622686077176 17 26.546938697680254 23.341710159689377 26.724115328479915 23.387235814150454 18 23.510385490266806 23.570291848842114 33.49377220170169 19.425550459189388 19 24.070835693702126 25.94342583330619 26.603428645885884 23.3823098271058 20 19.13205697301274 36.489249033275044 26.001504809590735 18.377189184121477 21 24.706764730886178 26.325269280670827 32.50023239535654 16.467733593086457 22 19.930702485478268 22.865637347244743 35.85292273907126 21.350737428205726 23 22.09376695790903 23.629165339166125 34.17196938578503 20.105098317139813 24 24.102536803876593 27.425353419707605 28.84078018100619 19.631329595409618 25 24.846440299023303 24.77334500739295 30.039463512339992 20.34075118124375 26 19.038065962144586 29.19171703223582 26.267190304386272 25.503026701233324 27 23.637348833772567 25.570083686163773 30.572582432817878 20.21998504724578 28 18.39490684720144 29.01104453966254 26.856958075877678 25.73709053725834 29 22.41085751105765 29.75375626375006 25.866437422882484 21.96894880230981 30 25.588754766091093 25.67734308149092 25.65652681365706 23.077375338760923 31 23.80117762870929 26.31668852904465 29.722690764807158 20.159443077438898 32 26.975261216353324 25.15614187160494 25.17973893857691 22.68885797346482 33 25.287475042327735 25.15550626037337 28.14129002066531 21.41572867663358 34 19.883111094514597 23.868393516447632 34.21217179618172 22.036323592856046 35 21.490889704766527 29.393682501066635 28.695304660380998 20.420123133785836 36 24.460465378653474 26.23135772120661 25.822739150712167 23.485437749427753 37 20.510300477264582 27.996370659867747 28.463544915070422 23.02978394779725 38 22.471002223844796 24.485889827916203 31.513604861154697 21.5295030870843 39 20.158171854975762 26.581817864012564 26.767734149246287 26.492276131765387 40 26.01286636035502 23.165725299948914 29.841629516514374 20.979778823181693 41 19.333942990439613 24.410093188551688 27.67268564019161 28.583278180817096 42 18.601957205884805 26.65221180790875 30.774706804456585 23.971124181749854 43 19.37668784576258 26.557664637212973 31.02553488671422 23.040112630310233 44 24.54547838087573 24.346690968202754 27.040570270396962 24.067260380524555 45 19.37962754770858 25.180215647000594 25.991652835501426 29.448503969789396 46 23.26591352032486 23.64648574522636 28.163536413770203 24.92406432067858 47 18.073446466835794 24.095068371905665 32.50714466749985 25.324340493758697 48 19.082558748354366 28.565083809313453 29.140709230902466 23.21164821142972 49 24.191999084719825 24.77199433352587 28.85381021125334 22.182196370500964 50 21.27668871972802 24.625485944649387 28.793903852678028 25.303921482944563 51 20.233332883108712 25.67130477479102 27.057970127861143 27.03739221423912 52 20.41503824393329 26.301592762294906 29.039488142275218 24.243880851496584 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 760.0 1 2721.5 2 4683.0 3 11885.5 4 19088.0 5 11530.5 6 3973.0 7 4314.0 8 4655.0 9 5953.0 10 7251.0 11 8832.5 12 10414.0 13 10716.0 14 10330.5 15 9643.0 16 8705.0 17 7767.0 18 7158.0 19 6549.0 20 6112.5 21 5676.0 22 5706.0 23 5736.0 24 6183.5 25 6631.0 26 7489.5 27 8348.0 28 8924.0 29 9500.0 30 11414.0 31 13328.0 32 13843.0 33 14358.0 34 17461.0 35 20564.0 36 22520.5 37 24477.0 38 26814.0 39 32816.5 40 36482.0 41 44224.5 42 51967.0 43 61012.5 44 70058.0 45 82199.5 46 94341.0 47 101685.0 48 109029.0 49 115721.0 50 122413.0 51 105654.5 52 88896.0 53 83424.5 54 77953.0 55 75358.5 56 72764.0 57 71737.5 58 70711.0 59 77375.0 60 84039.0 61 64136.5 62 44234.0 63 38369.0 64 28597.5 65 24691.0 66 20964.5 67 17238.0 68 15428.0 69 13618.0 70 11303.5 71 8989.0 72 7124.5 73 5260.0 74 4918.0 75 4576.0 76 3551.5 77 2527.0 78 1984.0 79 1441.0 80 1047.5 81 654.0 82 492.5 83 331.0 84 242.5 85 154.0 86 142.0 87 130.0 88 75.0 89 15.0 90 10.0 91 20.0 92 30.0 93 15.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1258631.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.015983608471434 #Duplication Level Percentage of deduplicated Percentage of total 1 71.07587601413333 15.648053212849073 2 11.26117661946204 4.958517597323561 3 4.535700441445779 2.9957371971542073 4 2.4107869537388087 2.1230338422812154 5 1.4400577908764158 1.5852144359593379 6 0.9097524413747563 1.2017456902244101 7 0.6712852148121191 1.0345303000138988 8 0.5344633606762673 0.9413389270381805 9 0.4521994086310315 0.8960053291363137 >10 4.658923864777002 24.552480874542184 >50 1.7049452978858934 26.774010482401977 >100 0.32924079253983535 9.409237447208666 >500 0.00870239980281418 1.3245386093027167 >1k 0.005801599868542786 2.4199652484572414 >5k 0.0 0.0 >10k+ 0.0010877999753517724 4.135590806106994 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 24666 1.9597483297328604 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15057 1.1962997892154252 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 12082 0.9599318624759758 No Hit GGGGCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTTCT 3387 0.26910190516521526 Illumina PCR Primer Index 7 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 2961 0.23525560708420495 No Hit CTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTTCTGCTT 2693 0.21396263082666803 TruSeq Adapter, Index 23 (96% over 27bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCAAGTCTTCTCG 2349 0.18663134786923252 No Hit GCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTTCTGCT 2114 0.16796026794191468 Illumina PCR Primer Index 7 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTTCTGCT 2028 0.16112744720255578 Illumina PCR Primer Index 7 (95% over 24bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 2006 0.15937951631574304 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCAAGTCTTCT 1778 0.14126459621604742 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1752 0.13919885971345058 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1532 0.12171955084532321 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCG 1506 0.11965381434272633 No Hit CGCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTTCTGC 1374 0.10916622902184994 TruSeq Adapter, Index 23 (96% over 25bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1322 0.10503475601665618 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCG 1269 0.10082383160751641 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21992148612262052 0.0 2 0.0 0.0 0.0 0.6635781257572712 0.0 3 0.0 0.0 0.0 1.0440708992548253 0.0 4 0.0 0.0 0.0 1.507113681452308 0.0 5 0.0 0.0 0.0 2.9670332289606725 0.0 6 0.0 0.0 0.0 4.25501993832982 0.0 7 0.0 0.0 0.0 5.298296323545185 0.0 8 0.0 0.0 0.0 7.120514273047462 0.0 9 0.0 0.0 0.0 8.12827588069895 0.0 10 0.0 0.0 0.0 9.219779268109557 0.0 11 0.0 0.0 0.0 10.817467550060343 0.0 12 0.0 0.0 0.0 11.74776403886445 0.0 13 0.0 0.0 0.0 12.19865075625819 0.0 14 0.0 0.0 0.0 12.552686212241714 0.0 15 0.0 0.0 0.0 12.856508380931345 0.0 16 0.0 0.0 0.0 13.329244234410243 0.0 17 0.0 0.0 0.0 13.84250030390162 0.0 18 0.0 0.0 0.0 14.488042960963142 0.0 19 0.0 0.0 0.0 14.861385108105553 0.0 20 7.945140394603342E-5 0.0 0.0 15.397523181933387 0.0 21 7.945140394603342E-5 0.0 0.0 15.867637139082067 0.0 22 7.945140394603342E-5 0.0 0.0 16.36087145477904 0.0 23 7.945140394603342E-5 0.0 0.0 16.813426651655647 0.0 24 3.9725701973016713E-4 0.0 0.0 17.151412924042074 0.0 25 3.9725701973016713E-4 0.0 0.0 17.54668365867359 0.0 26 3.9725701973016713E-4 0.0 0.0 17.869653615714217 0.0 27 3.9725701973016713E-4 0.0 0.0 18.36598653616509 0.0 28 3.9725701973016713E-4 0.0 0.0 18.738375266460146 0.0 29 3.9725701973016713E-4 0.0 0.0 19.219771322969162 0.0 30 3.9725701973016713E-4 0.0 0.0 20.53659889197072 0.0 31 3.9725701973016713E-4 0.0 0.0 21.037698896658352 0.0 32 3.9725701973016713E-4 0.0 0.0 21.376956391507917 0.0 33 3.9725701973016713E-4 0.0 0.0 21.79089820606675 0.0 34 3.9725701973016713E-4 0.0 0.0 22.24758487594855 0.0 35 3.9725701973016713E-4 0.0 0.0 22.66486364947312 0.0 36 3.9725701973016713E-4 0.0 0.0 22.969321429394316 0.0 37 3.9725701973016713E-4 0.0 0.0 23.346795049541925 0.0 38 3.9725701973016713E-4 0.0 0.0 23.841538941913875 0.0 39 3.9725701973016713E-4 0.0 0.0 25.48387891288233 0.0 40 3.9725701973016713E-4 0.0 0.0 25.88169209244012 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGTT 35 1.0196709E-7 46.000004 13 ATTAGCG 75 0.0 46.0 1 CTATCGA 20 6.311684E-4 46.0 31 CTATACG 25 3.417343E-5 46.0 1 TAAGTCG 30 1.8615447E-6 46.0 31 TACGATA 20 6.311684E-4 46.0 44 CGTAATC 20 6.311684E-4 46.0 34 CGTCGTA 20 6.311684E-4 46.0 31 CGTAAGT 20 6.311684E-4 46.0 30 GTATACG 20 6.311684E-4 46.0 1 CTCGAAC 50 1.6370905E-11 46.0 13 CAATGCG 20 6.311684E-4 46.0 1 ATAACGG 20 6.311684E-4 46.0 2 ATACGAC 30 1.8615447E-6 46.0 20 TATACGA 30 1.8615447E-6 46.0 19 TGTACGT 25 3.417343E-5 46.0 14 TTATTCG 20 6.311684E-4 46.0 41 ATCGCGA 20 6.311684E-4 46.0 27 TACGTTC 20 6.311684E-4 46.0 37 TACCGTC 20 6.311684E-4 46.0 14 >>END_MODULE