##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933093.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1694250 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52140002951158 33.0 31.0 34.0 31.0 34.0 2 32.90767360188874 34.0 31.0 34.0 31.0 34.0 3 32.91078471299985 34.0 31.0 34.0 31.0 34.0 4 36.38310756972112 37.0 37.0 37.0 35.0 37.0 5 36.320553637302645 37.0 37.0 37.0 35.0 37.0 6 36.398397521027 37.0 37.0 37.0 35.0 37.0 7 36.55132831636417 37.0 37.0 37.0 35.0 37.0 8 36.50067463479416 37.0 37.0 37.0 35.0 37.0 9 38.340935517190495 39.0 39.0 39.0 37.0 39.0 10 38.03302641286705 39.0 39.0 39.0 35.0 39.0 11 37.76804013575328 39.0 38.0 39.0 35.0 39.0 12 37.486958831341305 39.0 37.0 39.0 35.0 39.0 13 37.41934661354582 39.0 37.0 39.0 35.0 39.0 14 38.56188460970931 41.0 38.0 41.0 34.0 41.0 15 38.73055629334514 41.0 38.0 41.0 34.0 41.0 16 38.880293935369636 41.0 38.0 41.0 35.0 41.0 17 38.895045005164526 41.0 38.0 41.0 35.0 41.0 18 38.74969632580788 40.0 38.0 41.0 35.0 41.0 19 38.64319551423934 40.0 37.0 41.0 35.0 41.0 20 38.45800147557917 40.0 35.0 41.0 35.0 41.0 21 38.413782499631104 40.0 35.0 41.0 35.0 41.0 22 38.35357591854803 40.0 35.0 41.0 35.0 41.0 23 38.304594953519256 40.0 35.0 41.0 35.0 41.0 24 38.251530765825585 40.0 35.0 41.0 35.0 41.0 25 38.143695440460384 40.0 35.0 41.0 35.0 41.0 26 38.03344901873986 40.0 35.0 41.0 34.0 41.0 27 37.92790910432345 40.0 35.0 41.0 34.0 41.0 28 37.879202006787665 40.0 35.0 41.0 34.0 41.0 29 37.80806020362993 40.0 35.0 41.0 34.0 41.0 30 37.75174324922532 40.0 35.0 41.0 34.0 41.0 31 37.626538586395164 40.0 35.0 41.0 34.0 41.0 32 37.47736402537996 40.0 35.0 41.0 34.0 41.0 33 37.291367271654124 40.0 35.0 41.0 33.0 41.0 34 37.08144429688653 40.0 35.0 41.0 33.0 41.0 35 36.973079533716984 40.0 35.0 41.0 33.0 41.0 36 36.88276641581821 40.0 35.0 41.0 33.0 41.0 37 36.78841729378781 40.0 35.0 41.0 32.0 41.0 38 36.75247277556441 40.0 35.0 41.0 32.0 41.0 39 36.68736491072746 40.0 35.0 41.0 32.0 41.0 40 36.64326575180758 40.0 35.0 41.0 32.0 41.0 41 36.54284609709311 40.0 35.0 41.0 31.0 41.0 42 36.52711583296444 39.0 35.0 41.0 31.0 41.0 43 36.47248635089272 39.0 35.0 41.0 31.0 41.0 44 36.408142836063156 39.0 35.0 41.0 31.0 41.0 45 36.356602626530915 39.0 35.0 41.0 31.0 41.0 46 36.28875136491073 39.0 35.0 41.0 31.0 41.0 47 36.220357680389554 39.0 35.0 41.0 31.0 41.0 48 36.126549210565145 39.0 35.0 41.0 31.0 41.0 49 36.07789582411096 39.0 35.0 41.0 31.0 41.0 50 35.98902346170872 38.0 35.0 41.0 31.0 41.0 51 35.912541242437655 38.0 35.0 41.0 31.0 41.0 52 35.69593979637008 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 5.0 13 8.0 14 11.0 15 33.0 16 63.0 17 151.0 18 323.0 19 638.0 20 1042.0 21 1829.0 22 2874.0 23 4702.0 24 7916.0 25 13391.0 26 18076.0 27 19912.0 28 19892.0 29 20123.0 30 21468.0 31 24777.0 32 30862.0 33 41650.0 34 102897.0 35 165164.0 36 125312.0 37 121777.0 38 188634.0 39 755016.0 40 5703.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.42703261029954 22.21401800206581 25.824169986719784 17.53477940091486 2 38.112911317692195 22.737317397078353 25.953666814224587 13.196104471004869 3 28.898804780876493 23.67395602774089 33.80392504057843 13.623314150804191 4 25.565648517042938 26.863449904087354 33.32630957650878 14.244592002360926 5 24.664423786336137 31.197402980669914 30.08221927106389 14.055953961930056 6 26.19766858491958 38.40212483399734 25.94481333923565 9.455393241847425 7 84.49201711671832 1.601711671831194 11.580227239191384 2.3260439722591117 8 82.9701047661207 1.9149476169396489 12.223697801387043 2.8912498155526043 9 77.81342777039988 3.9226206285967242 14.076730116570754 4.18722148443264 10 42.092666371550834 22.029275490630074 20.48971521322119 15.388342924597906 11 27.296975062712114 24.56697653829128 32.535458167330674 15.600590231665928 12 28.846215139442233 20.148679356647484 32.27510697948945 18.729998524420836 13 25.949830308396045 21.687118193891102 35.043411539029066 17.319639958683783 14 18.147321823815847 23.45592445034676 36.77131474103585 21.625438984801534 15 14.545137966651911 29.66522059908514 38.131857754168514 17.65778368009444 16 23.42523240371846 28.15511288180611 32.66377453150361 15.755880182971815 17 22.25769514534455 28.449343367271656 30.556057252471597 18.736904234912203 18 18.672568983325956 26.934985981997933 35.35369632580788 19.03874870886823 19 19.206197432492253 29.158211598052237 31.192799173675667 20.442791795779844 20 16.957119669470266 33.90101814962373 30.98214549210565 18.159716688800355 21 21.183296443854214 29.714918105356354 33.56582558654272 15.535959864246717 22 19.788756086764057 25.898539176626826 34.35915596871772 19.953548767891398 23 18.5253061826767 26.526840785008115 35.48803305297329 19.45981997934189 24 18.91834144901874 27.6606167920909 34.25509812601446 19.165943632875905 25 20.57777777777778 28.74581673306773 31.775593920613844 18.90081156854065 26 18.128670503172494 31.02257636122178 29.361192267965176 21.48756086764055 27 19.910461856278587 29.02871477054744 31.873041168658702 19.187782204515273 28 17.46023314150804 30.42614726280065 29.88502287147706 22.228596724214253 29 18.681717574147854 29.595986424671683 29.829482071713148 21.892813929467316 30 20.691692489302053 29.30647779253357 29.15868378338498 20.8431459347794 31 19.378899217943044 29.423461708720673 29.939619300575476 21.258019772760807 32 20.68968570163789 30.546672568983325 27.45096650435296 21.312675225025824 33 20.36730116570754 29.54994835472923 28.548915449313856 21.533835030249374 34 17.610683193153314 30.33625498007968 31.00841080123949 21.044651025527518 35 17.90184447395603 32.458314888593776 27.930824848753133 21.709015788697066 36 19.20265604249668 31.445477349859818 27.93908809207614 21.41277851556736 37 17.50025084845802 32.105651468201266 29.92374206876199 20.47035561457872 38 18.977246569278442 29.55219123505976 30.70107717279032 20.76948502287148 39 17.896237273129703 31.15319462889184 28.8315183709606 22.119049727017853 40 21.49777187546112 28.81735281097831 30.0282130736314 19.656662239929172 41 17.91742658993655 28.79740298066991 29.750686144311643 23.534484285081895 42 17.58571639368452 29.46755201416556 31.89476169396488 21.05196989818504 43 18.609237125571788 30.03576803895529 30.965205843293493 20.38978899217943 44 19.994983030839606 29.70482514386897 28.87808764940239 21.422104175889036 45 18.616792090895675 28.958418179135307 28.55528995130589 23.869499778663126 46 20.103054448871184 28.88398996606168 28.72580787959274 22.2871477054744 47 18.104352958536225 28.458373911760365 31.161634941714624 22.275638187988786 48 17.58896266784713 29.64662830160838 31.06713885199941 21.69727017854508 49 20.151335399144163 28.41044710048694 30.120643352515863 21.317574147853033 50 18.167271654124242 28.128611480005905 31.597639073336286 22.106477792533568 51 17.53424819241552 28.32663420392504 30.96963258078796 23.169485022871477 52 18.26164969750627 28.957414785303232 30.412926073483842 22.368009443706654 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1514.0 1 3207.0 2 4900.0 3 32894.0 4 60888.0 5 34585.0 6 8282.0 7 9200.0 8 10118.0 9 12729.5 10 15341.0 11 18158.5 12 20976.0 13 21772.5 14 21275.5 15 19982.0 16 18157.5 17 16333.0 18 14956.5 19 13580.0 20 12862.0 21 12144.0 22 12341.0 23 12538.0 24 13020.5 25 13503.0 26 15108.5 27 16714.0 28 19231.0 29 21748.0 30 25377.5 31 29007.0 32 31737.5 33 34468.0 34 38149.0 35 41830.0 36 44523.5 37 47217.0 38 50968.5 39 60648.5 40 66577.0 41 74893.0 42 83209.0 43 95731.5 44 108254.0 45 121022.5 46 133791.0 47 136298.5 48 138806.0 49 137095.5 50 135385.0 51 122169.5 52 108954.0 53 101124.0 54 93294.0 55 86766.0 56 80238.0 57 75931.5 58 71625.0 59 70146.0 60 68667.0 61 55946.5 62 43226.0 63 36359.0 64 25344.5 65 21197.0 66 16606.0 67 12015.0 68 9679.0 69 7343.0 70 6044.0 71 4745.0 72 4373.5 73 4002.0 74 3205.0 75 2408.0 76 1937.5 77 1467.0 78 1088.5 79 710.0 80 461.0 81 212.0 82 155.0 83 98.0 84 83.5 85 69.0 86 71.0 87 73.0 88 44.0 89 9.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1694250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.728582397119176 #Duplication Level Percentage of deduplicated Percentage of total 1 71.625055960194 16.995610420497353 2 10.418665077677817 4.944403055273323 3 4.395199671100509 3.128755726424986 4 2.4222359996412433 2.299049060110223 5 1.5458425825863582 1.834032654693795 6 1.0285017182200473 1.4642932659817824 7 0.7497498511719066 1.2453350784532298 8 0.5800597422844027 1.101119631203773 9 0.46917385701379144 1.0019547472253363 >10 5.131278500987841 28.366575124144017 >50 1.3337721934190963 22.239439741117064 >100 0.2931975561060988 8.784814819013356 >500 0.002255365736985608 0.40238560765314246 >1k 0.0040095390879744145 1.908938253655805 >5k 5.011923859968018E-4 0.6053920306659736 >10k+ 5.011923859968018E-4 3.6779007838868285 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51518 3.040755496532389 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 10334 0.6099454035709015 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5105 0.30131326545669174 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 5076 0.299601593625498 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTT 3980 0.2349122030396931 No Hit CGTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 3905 0.23048546554522653 No Hit CGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 2960 0.1747085731149476 No Hit CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCTT 2132 0.1258373911760366 Illumina Single End Adapter 1 (95% over 21bp) GGGGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 1976 0.11662977718754611 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCT 1966 0.11603954552161723 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCG 1881 0.11102257636122177 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1791 0.10571049136786188 No Hit CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCT 1791 0.10571049136786188 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13038217500368895 0.0 2 0.0 0.0 0.0 0.3543750922236978 0.0 3 0.0 0.0 0.0 0.6608233731739708 0.0 4 0.0 0.0 0.0 0.9775416851114063 0.0 5 0.0 0.0 0.0 1.9906743396783237 0.0 6 0.0 0.0 0.0 3.4002065810830753 0.0 7 0.0 0.0 0.0 4.481451969898185 0.0 8 0.0 0.0 0.0 5.995573262505533 0.0 9 0.0 0.0 0.0 6.90996015936255 0.0 10 0.0 0.0 0.0 7.751748561310314 0.0 11 0.0 0.0 0.0 8.776095617529881 0.0 12 0.0 0.0 0.0 9.36821602478973 0.0 13 0.0 0.0 0.0 9.681274900398407 0.0 14 0.0 0.0 0.0 10.010151984653977 0.0 15 0.0 0.0 0.0 10.238689685701639 0.0 16 5.9023166592887706E-5 0.0 0.0 10.561310314298362 0.0 17 5.9023166592887706E-5 0.0 0.0 10.907835325365205 0.0 18 5.9023166592887706E-5 0.0 0.0 11.277438394569868 0.0 19 5.9023166592887706E-5 0.0 0.0 11.540976833407113 0.0 20 5.9023166592887706E-5 0.0 0.0 11.861000442673749 0.0 21 5.9023166592887706E-5 0.0 0.0 12.20357090157887 0.0 22 5.9023166592887706E-5 0.0 0.0 12.553401209974915 0.0 23 5.9023166592887706E-5 0.0 0.0 12.903113472037775 0.0 24 1.1804633318577541E-4 0.0 0.0 13.181053563523683 0.0 25 1.1804633318577541E-4 0.0 0.0 13.466253504500516 0.0 26 1.1804633318577541E-4 0.0 0.0 13.717633171019624 0.0 27 1.1804633318577541E-4 0.0 0.0 14.006492548325218 0.0 28 1.1804633318577541E-4 0.0 0.0 14.259760956175299 0.0 29 1.1804633318577541E-4 0.0 0.0 14.568097978456544 0.0 30 1.1804633318577541E-4 0.0 0.0 15.180463331857753 0.0 31 1.1804633318577541E-4 0.0 0.0 15.51990556293345 0.0 32 1.1804633318577541E-4 0.0 0.0 15.87310019182529 0.0 33 1.1804633318577541E-4 0.0 0.0 16.183384978604103 0.0 34 1.1804633318577541E-4 0.0 0.0 16.498863804043086 0.0 35 1.1804633318577541E-4 0.0 0.0 16.818474251143574 0.0 36 1.1804633318577541E-4 0.0 0.0 17.09842113029364 0.0 37 1.1804633318577541E-4 0.0 0.0 17.40091485908219 0.0 38 1.1804633318577541E-4 0.0 0.0 17.735635236830458 0.0 39 1.1804633318577541E-4 0.0 0.0 18.56532388962668 0.0 40 1.1804633318577541E-4 0.0 0.0 18.93451379666519 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCGTA 20 6.3123053E-4 46.000004 35 GCTCGAT 20 6.3123053E-4 46.000004 9 CGAAGTA 20 6.3123053E-4 46.000004 23 GTCACGA 25 3.4178465E-5 46.0 38 TCCGTAA 25 3.4178465E-5 46.0 22 TATAGCG 90 0.0 46.0 1 TTACGCG 25 3.4178465E-5 46.0 1 TATCGCT 25 3.4178465E-5 46.0 46 TCGCGCG 25 3.4178465E-5 46.0 1 CGTTTTT 12375 0.0 44.550304 1 TATTGCG 120 0.0 44.083332 1 TGCGTAG 75 0.0 42.93333 1 ATACGAA 1210 0.0 42.38843 19 CGGGATA 245 0.0 42.2449 6 CGAATAT 230 0.0 42.000004 14 CATACGA 1225 0.0 41.493877 18 AGGGCGA 390 0.0 41.28205 6 TCTCGCG 95 0.0 41.157894 32 ACATACG 1235 0.0 41.157894 17 GTACGAG 95 0.0 41.157894 1 >>END_MODULE