##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933090.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2022195 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53866021822821 33.0 31.0 34.0 31.0 34.0 2 32.89507243366737 34.0 31.0 34.0 31.0 34.0 3 32.97201456832798 34.0 31.0 34.0 31.0 34.0 4 36.38744334745166 37.0 37.0 37.0 35.0 37.0 5 36.36883040458512 37.0 37.0 37.0 35.0 37.0 6 36.50545471628602 37.0 37.0 37.0 35.0 37.0 7 36.560945902843194 37.0 37.0 37.0 35.0 37.0 8 36.42038329636855 37.0 37.0 37.0 35.0 37.0 9 38.05665823523449 39.0 39.0 39.0 35.0 39.0 10 37.97463350468179 39.0 38.0 39.0 35.0 39.0 11 37.62330685220763 39.0 37.0 39.0 35.0 39.0 12 37.488739216544396 39.0 37.0 39.0 35.0 39.0 13 37.34674203031854 39.0 37.0 39.0 35.0 39.0 14 38.844052131471 41.0 38.0 41.0 35.0 41.0 15 38.930504229315176 41.0 38.0 41.0 35.0 41.0 16 38.94870326551099 41.0 38.0 41.0 35.0 41.0 17 38.94834078810401 41.0 38.0 41.0 35.0 41.0 18 38.87754296692456 41.0 38.0 41.0 35.0 41.0 19 38.743839243989825 41.0 37.0 41.0 35.0 41.0 20 38.650029299844974 40.0 37.0 41.0 35.0 41.0 21 38.62445313137457 40.0 37.0 41.0 35.0 41.0 22 38.58374291302273 40.0 36.0 41.0 35.0 41.0 23 38.543762594606356 40.0 36.0 41.0 35.0 41.0 24 38.47751972485344 40.0 36.0 41.0 35.0 41.0 25 38.424165325302454 40.0 36.0 41.0 35.0 41.0 26 38.336342439774604 40.0 36.0 41.0 35.0 41.0 27 38.271278486990624 40.0 36.0 41.0 35.0 41.0 28 38.25183229114897 40.0 36.0 41.0 35.0 41.0 29 38.22068148719585 40.0 36.0 41.0 35.0 41.0 30 38.11031329817352 40.0 35.0 41.0 34.0 41.0 31 38.04697370926147 40.0 35.0 41.0 34.0 41.0 32 37.951476489656045 40.0 35.0 41.0 34.0 41.0 33 37.7842977556566 40.0 35.0 41.0 34.0 41.0 34 37.668810871355134 40.0 35.0 41.0 34.0 41.0 35 37.56328049470996 40.0 35.0 41.0 33.0 41.0 36 37.48093581479531 40.0 35.0 41.0 33.0 41.0 37 37.388855179643905 40.0 35.0 41.0 33.0 41.0 38 37.3616876710703 40.0 35.0 41.0 33.0 41.0 39 37.272943014892235 40.0 35.0 41.0 33.0 41.0 40 37.195974671087605 40.0 35.0 41.0 33.0 41.0 41 37.16333835263167 40.0 35.0 41.0 33.0 41.0 42 37.11624793850247 40.0 35.0 41.0 33.0 41.0 43 37.03999614280522 40.0 35.0 41.0 33.0 41.0 44 36.95674650565351 39.0 35.0 41.0 33.0 41.0 45 36.88689518073183 39.0 35.0 41.0 33.0 41.0 46 36.79306248902801 39.0 35.0 41.0 32.0 41.0 47 36.67517326469505 39.0 35.0 41.0 32.0 41.0 48 36.60670261770007 39.0 35.0 41.0 32.0 41.0 49 36.50421695237106 39.0 35.0 41.0 32.0 41.0 50 36.32737248386036 38.0 35.0 41.0 32.0 41.0 51 36.18987140211503 38.0 35.0 40.0 31.0 41.0 52 35.91991969122661 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 1.0 12 4.0 13 8.0 14 12.0 15 27.0 16 53.0 17 142.0 18 290.0 19 570.0 20 1036.0 21 1612.0 22 2683.0 23 4088.0 24 6740.0 25 10632.0 26 14758.0 27 17048.0 28 18119.0 29 19945.0 30 22535.0 31 27338.0 32 34731.0 33 47136.0 34 113241.0 35 205639.0 36 126376.0 37 152064.0 38 256411.0 39 928779.0 40 10172.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.51220332361617 21.366782135254017 24.118099391997312 19.0029151491325 2 28.17082427757956 23.98784489131859 26.74242592826112 21.098904902840726 3 28.189121227181356 23.951844406696683 26.857795613182706 21.001238752939255 4 23.509651640914946 27.68204846713596 24.98364401059245 23.824655881356644 5 21.45416243240637 39.28473762421527 21.970433118467803 17.290666824910556 6 87.73956023034376 2.885824561924048 7.340686729024649 2.0339284787075433 7 89.69570194763611 1.9855157390854985 5.712505470540675 2.606276842737718 8 82.90194565805969 4.057867811956809 9.027418226234364 4.0127683037491435 9 39.519680347345336 28.064949225964853 16.32290654462107 16.092463882068742 10 31.55066647875205 24.469598629212317 24.975039499158093 19.00469539287754 11 29.240750768348256 22.061027744604253 29.798758279987837 18.899463207059654 12 22.45535173413049 27.14654125838507 31.90988010552889 18.48822690195555 13 18.50904586352948 31.626920252497904 31.76350450871454 18.100529375258073 14 17.319002371185764 28.957642561671847 36.06828223786529 17.655072829277096 15 20.267827781198154 23.054651010411952 37.30757914048843 19.369942067901462 16 20.223074431496467 24.629919468696144 28.506746382025472 26.640259717781916 17 21.815749717509934 27.585124085461587 30.18680196519129 20.412324231837186 18 24.868867740252547 30.18190629489243 26.691590079097217 18.257635885757804 19 23.232724836131034 26.909027072067726 26.752167817643702 23.106080274157538 20 23.009254794913446 27.695301392793475 29.795692304649158 19.49975150764392 21 19.882405010397118 24.935181819755268 29.25706966934445 25.925343500503168 22 17.71302965342116 30.40779944565188 28.56138997475515 23.317780926171807 23 17.685831485094166 30.732001612109617 31.437274842436064 20.144892060360153 24 23.452288231352565 27.044473950336144 28.9139276874881 20.58931013082319 25 18.267328323925238 29.32011996864793 26.495664364712603 25.91688734271423 26 17.135043850865024 29.28085570382678 30.945383605438643 22.638716839869545 27 19.15680733064813 27.296230086613804 32.85370599769063 20.693256585047436 28 18.17248089328675 30.371205546448287 28.995522192469075 22.460791367795885 29 21.987592690121378 27.380692762072893 29.965161618933884 20.666552928871845 30 25.8145727785896 28.1708737287947 26.177594148932226 19.83695934368347 31 25.192723748204305 30.312012441925727 24.269172854249963 20.22609095562001 32 23.449667316950144 28.35705755379674 23.62729608173297 24.565979047520145 33 20.602958666201825 28.78525562569386 26.52998350801975 24.081802200084564 34 20.657800063792067 29.205195344662606 26.169385247218983 23.967619344326337 35 26.84325695593155 29.610448052734778 24.12195658677823 19.424338404555446 36 21.39447481573241 32.13785020732422 24.23579328403047 22.2318816929129 37 22.514989899589306 31.931786993835903 25.682191875659864 19.87103123091492 38 20.536347879408268 29.681657802536353 24.322234008095165 25.459760309960217 39 23.851211183886818 26.68343062859912 28.933905978404656 20.531452209109407 40 19.791068616033566 26.784113302624128 29.85310516542668 23.571712915915626 41 20.46627550755491 31.233486384844188 25.58165755528028 22.71858055232062 42 20.044209386335147 27.447600256157294 27.340390021733807 25.167800335773748 43 21.953026290738528 28.005657219012015 29.366604110879514 20.674712379369943 44 21.684506192528417 29.513869829566385 25.35230281946103 23.449321158444167 45 23.92855288436575 28.161379095487828 26.320211453395935 21.589856566750488 46 23.89725026518214 27.909969117716145 27.048083889041365 21.14469672806035 47 19.896894216433132 30.864382515039352 28.255732013974917 20.9829912545526 48 20.787955662040506 28.70143581603159 27.55431597842938 22.956292543498524 49 19.948817992330117 27.625970789167216 29.99018393379471 22.435027284707953 50 20.324301068888015 27.58769554864887 29.859879981900857 22.22812340056226 51 20.175551813746942 26.09204354674005 28.29148524252112 25.440919396991884 52 20.606321348831344 25.76452814886794 28.843509157128764 24.785641345171953 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2887.0 1 2852.5 2 2818.0 3 13936.0 4 25054.0 5 15267.0 6 5480.0 7 6041.0 8 6602.0 9 8428.5 10 10255.0 11 11642.0 12 13029.0 13 13437.5 14 12819.0 15 11792.0 16 10469.5 17 9147.0 18 8684.0 19 8221.0 20 8041.0 21 7861.0 22 7712.0 23 7563.0 24 8703.0 25 9843.0 26 12169.0 27 14495.0 28 17087.5 29 19680.0 30 22249.5 31 24819.0 32 27302.0 33 29785.0 34 37280.0 35 44775.0 36 50812.5 37 56850.0 38 60171.5 39 65804.5 40 68116.0 41 80072.0 42 92028.0 43 112437.0 44 132846.0 45 147135.5 46 161425.0 47 174314.0 48 187203.0 49 206562.0 50 225921.0 51 203230.5 52 180540.0 53 158200.5 54 135861.0 55 121743.5 56 107626.0 57 98973.5 58 90321.0 59 82030.0 60 73739.0 61 66828.5 62 59918.0 63 50798.0 64 34739.5 65 27801.0 66 23000.5 67 18200.0 68 14447.5 69 10695.0 70 9334.0 71 7973.0 72 6806.5 73 5640.0 74 4287.5 75 2935.0 76 2365.5 77 1796.0 78 1342.5 79 889.0 80 647.5 81 406.0 82 320.0 83 234.0 84 157.5 85 81.0 86 45.0 87 9.0 88 7.0 89 5.0 90 5.0 91 4.5 92 4.0 93 3.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2022195.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.079279084124394 #Duplication Level Percentage of deduplicated Percentage of total 1 72.26980054371111 15.233952950148916 2 11.233825888016833 4.736019021519367 3 4.343812614680575 2.746933151819758 4 2.2080071059221837 1.8617279202185408 5 1.2812555920060182 1.350397210099494 6 0.8978207252157662 1.1355248180600457 7 0.6469550784779072 0.9546142657889185 8 0.48075686436296944 0.8107206492412456 9 0.3637483684623788 0.6900798037692056 >10 4.027071064459589 19.524171362490268 >50 1.4044497299616427 21.563857595215907 >100 0.8309392234785525 24.065628425976513 >500 0.006839976246724693 0.9676088184000728 >1k 0.0037737799981929342 1.6553558528738275 >5k 2.358612498870584E-4 0.49578641131875073 >10k+ 7.075837496611752E-4 2.2076217430592147 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19433 0.9609854638153096 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 14269 0.7056193888324321 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 10701 0.529177453212969 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 9972 0.49312751737592075 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3823 0.18905199548015894 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3561 0.17609577711348312 No Hit CTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCTT 3430 0.1696176679301452 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCT 3013 0.14899651121677188 No Hit GCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCT 2602 0.12867206179423843 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2447 0.12100712344754092 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17931010609758208 0.0 2 0.0 0.0 0.0 0.5610240357631188 0.0 3 0.0 0.0 0.0 1.006233325668395 0.0 4 0.0 0.0 0.0 1.3174298225443144 0.0 5 0.0 0.0 0.0 2.953177116944706 0.0 6 0.0 0.0 0.0 3.3705948239413113 0.0 7 0.0 0.0 0.0 4.431916803275649 0.0 8 0.0 0.0 0.0 5.7255111401224905 0.0 9 0.0 0.0 0.0 6.8498834187603075 0.0 10 0.0 0.0 0.0 7.7116697450048095 0.0 11 0.0 0.0 0.0 8.554219548559857 0.0 12 0.0 0.0 0.0 9.157474922052522 0.0 13 4.9451215139984025E-5 0.0 0.0 9.41338496040194 0.0 14 4.9451215139984025E-5 0.0 0.0 9.56772220285383 0.0 15 4.9451215139984025E-5 0.0 0.0 10.050860574771473 0.0 16 4.9451215139984025E-5 0.0 0.0 10.660742411092897 0.0 17 4.9451215139984025E-5 0.0 0.0 11.395587468073058 0.0 18 4.9451215139984025E-5 0.0 0.0 11.750202131841885 0.0 19 4.9451215139984025E-5 0.0 0.0 12.16717477790223 0.0 20 4.9451215139984025E-5 0.0 0.0 12.63186784657266 0.0 21 5.439633665398243E-4 0.0 0.0 13.116588657374784 0.0 22 5.439633665398243E-4 0.0 0.0 13.601260016961767 0.0 23 5.439633665398243E-4 0.0 0.0 13.96161102168683 0.0 24 5.439633665398243E-4 0.0 0.0 14.250307215674058 0.0 25 5.439633665398243E-4 0.0 0.0 14.532624202908226 0.0 26 5.439633665398243E-4 0.0 0.0 14.875716733549435 0.0 27 5.439633665398243E-4 0.0 0.0 15.226424751322202 0.0 28 5.439633665398243E-4 0.0 0.0 15.587913133995485 0.0 29 5.439633665398243E-4 0.0 0.0 15.930016640333895 0.0 30 5.439633665398243E-4 0.0 0.0 16.274246548923323 0.0 31 5.439633665398243E-4 0.0 0.0 16.56927249844847 0.0 32 5.439633665398243E-4 0.0 0.0 16.927052039986254 0.0 33 5.934145816798083E-4 0.0 0.0 17.283348045069836 0.0 34 5.934145816798083E-4 0.0 0.0 17.727370505811756 0.0 35 5.934145816798083E-4 0.0 0.0 18.04578688009811 0.0 36 5.934145816798083E-4 0.0 0.0 18.377505631257122 0.0 37 5.934145816798083E-4 0.0 0.0 18.805604800723966 0.0 38 5.934145816798083E-4 0.0 0.0 19.6269894841991 0.0 39 6.428657968197924E-4 0.0 0.0 20.03120371675333 0.0 40 6.428657968197924E-4 0.0 0.0 20.393137160362873 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTACC 20 6.312598E-4 46.0 36 TCTACGT 40 5.6152203E-9 46.0 14 GCTCGAT 25 3.4180823E-5 46.0 32 GTGCGAC 20 6.312598E-4 46.0 40 TGTCGAT 20 6.312598E-4 46.0 23 GCGTAAT 30 1.8621104E-6 46.0 21 TATACGG 195 0.0 44.82051 1 CACGACG 565 0.0 44.37168 25 GACGGTC 565 0.0 43.964603 28 CGTTTTT 6030 0.0 43.48259 1 CTAGCGG 425 0.0 43.29412 1 GTTACGG 155 0.0 43.03226 1 ACGGTCT 580 0.0 42.827587 29 TCACGAC 600 0.0 42.55 24 CGACGGT 580 0.0 42.431038 27 CGGTCTA 580 0.0 42.431038 30 ACGGGCC 235 0.0 42.085106 4 GCGTAGG 345 0.0 42.0 1 TATGCGG 385 0.0 41.818184 1 ATAGCGG 255 0.0 41.490196 1 >>END_MODULE