##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933087.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 750087 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.351103272020445 33.0 31.0 34.0 31.0 34.0 2 32.71860997457628 34.0 31.0 34.0 31.0 34.0 3 32.745792154776716 34.0 31.0 34.0 31.0 34.0 4 36.229002769012126 37.0 37.0 37.0 35.0 37.0 5 36.04551605347113 37.0 35.0 37.0 35.0 37.0 6 36.15023990550429 37.0 35.0 37.0 35.0 37.0 7 36.42874226589716 37.0 37.0 37.0 35.0 37.0 8 36.35828377241573 37.0 37.0 37.0 35.0 37.0 9 38.17174007815093 39.0 39.0 39.0 37.0 39.0 10 37.8662501816456 39.0 38.0 39.0 35.0 39.0 11 37.54232908982558 39.0 37.0 39.0 35.0 39.0 12 37.10643831982157 39.0 35.0 39.0 35.0 39.0 13 36.99141166291377 39.0 35.0 39.0 33.0 39.0 14 37.67528166732659 40.0 36.0 41.0 32.0 41.0 15 37.9257286154806 40.0 35.0 41.0 33.0 41.0 16 38.19340289859709 40.0 35.0 41.0 33.0 41.0 17 38.276467929720155 40.0 35.0 41.0 34.0 41.0 18 38.19605992371552 40.0 36.0 41.0 34.0 41.0 19 38.15191837746821 40.0 36.0 41.0 34.0 41.0 20 37.96307894950852 40.0 35.0 41.0 33.0 41.0 21 37.924675404319764 40.0 35.0 41.0 34.0 41.0 22 37.86673679186548 40.0 35.0 41.0 34.0 41.0 23 37.857912482152074 40.0 35.0 41.0 34.0 41.0 24 37.82282855188798 40.0 35.0 41.0 34.0 41.0 25 37.65284027052862 39.0 35.0 41.0 34.0 41.0 26 37.569203305749866 39.0 35.0 41.0 34.0 41.0 27 37.47321044092219 39.0 35.0 41.0 34.0 41.0 28 37.470845381935696 39.0 35.0 41.0 34.0 41.0 29 37.432081878502096 39.0 35.0 41.0 34.0 41.0 30 37.38592989879841 39.0 35.0 41.0 33.0 41.0 31 37.2626162031871 40.0 35.0 41.0 33.0 41.0 32 37.100433683026104 39.0 35.0 41.0 33.0 41.0 33 37.00664989527881 39.0 35.0 41.0 33.0 41.0 34 36.87196418548782 39.0 35.0 41.0 32.0 41.0 35 36.77360892803102 39.0 35.0 41.0 32.0 41.0 36 36.73942356020035 39.0 35.0 41.0 32.0 41.0 37 36.641185622467795 39.0 35.0 41.0 32.0 41.0 38 36.62281308701524 39.0 35.0 41.0 32.0 41.0 39 36.589598273266965 39.0 35.0 41.0 32.0 41.0 40 36.493616073868765 39.0 35.0 41.0 31.0 41.0 41 36.33359730271289 39.0 35.0 41.0 31.0 41.0 42 36.36292990013158 39.0 35.0 41.0 31.0 41.0 43 36.31760182485498 39.0 35.0 41.0 31.0 41.0 44 36.274969436878656 39.0 35.0 41.0 31.0 41.0 45 36.21039826046845 38.0 35.0 41.0 31.0 41.0 46 36.156784479667024 38.0 35.0 41.0 31.0 41.0 47 36.047537152356995 38.0 35.0 41.0 31.0 41.0 48 35.95024043877577 38.0 35.0 41.0 31.0 41.0 49 35.95409865788902 38.0 35.0 41.0 31.0 41.0 50 35.83319401616079 38.0 35.0 41.0 30.0 41.0 51 35.78162266510418 38.0 35.0 41.0 30.0 41.0 52 35.532359579622096 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 3.0 13 6.0 14 7.0 15 17.0 16 63.0 17 102.0 18 196.0 19 345.0 20 603.0 21 937.0 22 1460.0 23 2241.0 24 3882.0 25 5908.0 26 7322.0 27 8312.0 28 8856.0 29 9731.0 30 11253.0 31 13899.0 32 17250.0 33 24105.0 34 62097.0 35 87568.0 36 47666.0 37 52041.0 38 80958.0 39 300730.0 40 2526.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.634602386123206 22.317944451776928 23.814570843115533 14.23288231898433 2 39.67739742189906 21.967851729199413 24.69700181445619 13.657749034445338 3 34.65917953517392 22.17009493565413 29.303800759111944 13.866924770060008 4 31.218911939548345 25.819271631157452 28.62147990833063 14.340336520963568 5 24.786324786324787 28.69920422564316 30.833889935434154 15.6805810525979 6 27.334162570475158 33.509046283964395 29.32166535348566 9.835125792074786 7 82.36431240642752 2.2132099343142864 11.646249035111927 3.7762286241462655 8 79.34012987826745 2.2886678478629814 12.697327110055234 5.673875163814331 9 73.32322783890403 4.03633178551288 15.616721793605276 7.023718581977824 10 48.98125150815839 17.663151074475362 20.748259868521917 12.607337548844333 11 32.26479061762169 23.294231202513842 27.986753536589752 16.454224643274713 12 31.16198520971567 16.931502612363634 33.94806202480512 17.95845015311557 13 28.927311098579235 19.38161839893239 37.030771097219386 14.66029940526899 14 17.538632185333167 22.29154751382173 40.65715043721595 19.512669863629153 15 14.006108624732864 28.538289558411222 40.16600740980713 17.289594407048785 16 27.472813153674174 25.26253621246602 31.660860673495208 15.603789960364598 17 23.891228617480373 23.99361674045811 27.68092234634116 24.434232295720363 18 20.610942464007508 24.29384858023136 36.66228050879432 18.432928446966816 19 21.546700582732402 25.558635198317 29.06182882785597 23.832835391094633 20 16.504218843947434 38.18277079858736 26.741831280904748 18.57117907656045 21 22.776557919281363 27.410153755497696 33.84980675574967 15.963481569471275 22 16.993095467592426 24.487292807367677 36.620152062360766 21.89945966267913 23 18.855146136381514 24.80578919512003 35.6853271687151 20.653737499783357 24 23.770309310786615 26.844752675356325 29.509376912278174 19.875561101578885 25 23.16317973781708 24.442764639301842 30.914013974378975 21.48004164850211 26 16.87737555776863 28.806125156148553 27.8577018399199 26.45879744616291 27 21.94638755237726 24.75606163018423 32.06828007951078 21.229270737927735 28 15.70551149400003 29.286469436212066 26.52318997662938 28.484829093158524 29 19.79850337360866 28.865851561218896 25.65889023539936 25.67675482977308 30 24.10013771735812 25.02096423481543 25.860866806117155 25.018031241709295 31 20.695999264085366 25.576766428427632 29.709886986442907 24.01734732104409 32 23.55713403911813 23.38208767782937 24.678337312871708 28.382440970180795 33 22.411400277567804 24.110136557492666 30.069711913418047 23.40875125152149 34 16.051204726918343 21.53643510686094 36.768801485694325 25.64355868052639 35 17.161209299721232 26.745430863353185 31.00666989295908 25.0866899439665 36 20.075004632795928 24.899111703042447 29.104090592157977 25.921793072003645 37 15.828163932983774 28.57508529010635 29.69802169614991 25.898729080759963 38 19.15657783697091 24.403035914500585 32.28012217249466 24.160264076033847 39 18.290278327713985 26.047111868356605 28.896114717359456 26.766495086569957 40 24.5058239910837 21.952120220721064 32.76673239237582 20.775323395819417 41 16.724193326907415 23.627792509402244 28.889715459673344 30.758298704017 42 16.567411513597758 26.11577057061381 31.550340160541378 25.76647775524706 43 17.695947270116665 24.738863625152817 32.08787780617449 25.47731129855603 44 22.15889623470344 22.641106964925402 27.659058215913625 27.540938584457535 45 18.334139906437517 22.628575085290105 27.605864386397844 31.43142062187453 46 22.593779121621893 22.421665753439267 29.71281997954904 25.2717351453898 47 16.60020770923906 23.000265302558237 32.811527196178574 27.587999792024124 48 15.359418307476332 26.81422288347885 31.853638311289224 25.972720497755592 49 23.5152722284215 21.794938453806026 31.233843540815933 23.45594577695654 50 19.78063877923494 21.899326344810667 31.304368693231588 27.015666182722804 51 18.126030713770536 22.367272063107347 28.917045622707764 30.589651600414353 52 17.84566323639791 23.141048971652623 32.22452862134659 26.788759170602876 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 426.0 1 1533.5 2 2641.0 3 8166.5 4 13692.0 5 8027.5 6 2363.0 7 2566.0 8 2769.0 9 3573.5 10 4378.0 11 5447.0 12 6516.0 13 6926.0 14 6811.5 15 6287.0 16 5895.0 17 5503.0 18 5077.5 19 4652.0 20 4327.5 21 4003.0 22 3711.5 23 3420.0 24 3482.5 25 3545.0 26 4123.5 27 4702.0 28 5041.5 29 5381.0 30 6212.5 31 7044.0 32 8047.5 33 9051.0 34 10144.0 35 11237.0 36 11939.0 37 12641.0 38 13221.0 39 16025.5 40 18250.0 41 22226.5 42 26203.0 43 30220.0 44 34237.0 45 43082.5 46 51928.0 47 64249.0 48 76570.0 49 85201.5 50 93833.0 51 83485.0 52 73137.0 53 64933.5 54 56730.0 55 52028.5 56 47327.0 57 41911.0 58 36495.0 59 40774.0 60 45053.0 61 33218.5 62 21384.0 63 17137.5 64 11006.5 65 9122.0 66 7356.5 67 5591.0 68 4725.0 69 3859.0 70 3036.5 71 2214.0 72 1801.5 73 1389.0 74 1177.5 75 966.0 76 889.5 77 813.0 78 543.5 79 274.0 80 229.0 81 184.0 82 150.0 83 116.0 84 84.0 85 52.0 86 31.5 87 11.0 88 32.0 89 33.5 90 14.0 91 8.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 750087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.015069033666244 #Duplication Level Percentage of deduplicated Percentage of total 1 69.89569569827492 18.183413487467504 2 12.457096893876434 6.4814447130652955 3 5.117603629322611 3.9940443511130583 4 2.581219365747371 2.686023999638162 5 1.4923652153906932 1.9411992050915534 6 0.9562656474688979 1.4926390100056153 7 0.692758563250226 1.261551329263265 8 0.5016893665469329 1.0441186803339797 9 0.38993322146752263 0.9129725707497722 >10 4.69614504282572 29.436035361990086 >50 1.110211666484323 18.791377525356946 >100 0.09153204105328219 4.374608180141265 >500 0.010284498994750807 1.8961406790410782 >1k 0.005656474447112944 2.8618694473490747 >5k 5.142249497375403E-4 0.9930190673431581 >10k+ 0.0010284498994750806 3.649542392050208 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 16089 2.144951185662463 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11192 1.4920935838109446 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 7423 0.9896185375829737 No Hit CTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCTT 3092 0.4122188492801502 TruSeq Adapter, Index 27 (100% over 26bp) GCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCT 2681 0.3574252053428469 TruSeq Adapter, Index 27 (96% over 26bp) CCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCT 2608 0.34769300094522365 TruSeq Adapter, Index 27 (96% over 26bp) GGGGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCT 2184 0.2911662247179327 TruSeq Adapter, Index 27 (95% over 23bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCACCTTTCTCG 2037 0.2715684980542257 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1935 0.25797007547124534 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCG 1602 0.21357522527386824 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCCACCTTTCT 1449 0.1931775913993977 No Hit CGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 1436 0.19144445910941 TruSeq Adapter, Index 27 (100% over 24bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1224 0.1631810709957645 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCG 1145 0.15264895938737771 No Hit GGGGTTGGGGACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCC 931 0.12411893553681105 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 919 0.12251912111528396 No Hit TCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCT 846 0.11278691671766075 TruSeq Adapter, Index 27 (96% over 26bp) TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 828 0.1103871950853701 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 771 0.10278807658311635 No Hit GGGGTTGGGGATTTAGCTCAGTGGCTGTCTCTTATACACATCTGACGCCACC 763 0.10172153363543163 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGCTGTCTCTTATACACATCTGACGCC 755 0.1006549906877469 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4247507289154458 0.0 2 0.0 0.0 0.0 1.365841562378764 0.0 3 0.0 0.0 0.0 2.15095048974319 0.0 4 0.0 0.0 0.0 3.050312830378343 0.0 5 0.0 0.0 0.0 5.71866996761709 0.0 6 0.0 0.0 0.0 7.735635999557385 0.0 7 0.0 0.0 0.0 9.23706183416057 0.0 8 0.0 0.0 0.0 11.999408068664035 0.0 9 0.0 0.0 0.0 13.2620616008543 0.0 10 0.0 0.0 0.0 14.8202808474217 0.0 11 0.0 0.0 0.0 17.326523456612367 0.0 12 0.0 0.0 0.0 18.882476299415934 0.0 13 0.0 0.0 0.0 19.560397660538044 0.0 14 0.0 0.0 0.0 19.85649664638902 0.0 15 0.0 0.0 0.0 20.3156433853673 0.0 16 0.0 0.0 0.0 21.137148090821466 0.0 17 0.0 0.0 0.0 22.001581149919943 0.0 18 0.0 0.0 0.0 23.008664328271255 0.0 19 0.0 0.0 0.0 23.585930698705617 0.0 20 0.0 0.0 0.0 24.368373268700832 0.0 21 0.0 0.0 0.0 25.04829439784985 0.0 22 0.0 0.0 0.0 25.75114620037409 0.0 23 0.0 0.0 0.0 26.371740878058144 0.0 24 2.6663573692118384E-4 0.0 0.0 26.832887385063334 0.0 25 2.6663573692118384E-4 0.0 0.0 27.403087908469285 0.0 26 2.6663573692118384E-4 0.0 0.0 27.853568985997626 0.0 27 2.6663573692118384E-4 0.0 0.0 28.49069507937079 0.0 28 2.6663573692118384E-4 0.0 0.0 28.990903721834933 0.0 29 2.6663573692118384E-4 0.0 0.0 29.585768050906093 0.0 30 2.6663573692118384E-4 0.0 0.0 31.025201076675106 0.0 31 2.6663573692118384E-4 0.0 0.0 31.56860470852048 0.0 32 2.6663573692118384E-4 0.0 0.0 31.961492466873842 0.0 33 2.6663573692118384E-4 0.0 0.0 32.46743377768179 0.0 34 2.6663573692118384E-4 0.0 0.0 33.012037270343306 0.0 35 2.6663573692118384E-4 0.0 0.0 33.536109811261895 0.0 36 2.6663573692118384E-4 0.0 0.0 33.88766903039247 0.0 37 2.6663573692118384E-4 0.0 0.0 34.358947695400666 0.0 38 2.6663573692118384E-4 0.0 0.0 34.90675081690524 0.0 39 2.6663573692118384E-4 0.0 0.0 36.415109180668374 0.0 40 2.6663573692118384E-4 0.0 0.0 36.863323854432885 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTG 35 1.0189251E-7 46.000004 13 CGGACAT 30 1.8605315E-6 46.0 10 CAGCGTA 30 1.8605315E-6 46.0 36 AAGTACG 40 5.6061253E-9 46.0 1 AACCGGT 25 3.4160126E-5 46.0 30 ACCGGTT 25 3.4160126E-5 46.0 31 CCCCTAT 20 6.310045E-4 46.0 31 GATCGTA 20 6.310045E-4 46.0 27 CACGGTT 20 6.310045E-4 46.0 11 ATAGGCG 20 6.310045E-4 46.0 11 CCGATTA 25 3.4160126E-5 46.0 12 CAACGAA 20 6.310045E-4 46.0 19 TTAGCGT 20 6.310045E-4 46.0 41 ACGTTAG 30 1.8605315E-6 46.0 1 CGACCAA 90 0.0 46.0 29 CGATTAG 25 3.4160126E-5 46.0 13 TACGGGT 60 0.0 46.0 4 TATGCGT 20 6.310045E-4 46.0 11 ACGGGTG 25 3.4160126E-5 46.0 5 GCCGCTA 20 6.310045E-4 46.0 18 >>END_MODULE