##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933086.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 506896 Sequences flagged as poor quality 0 Sequence length 52 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58355362835769 33.0 31.0 34.0 31.0 34.0 2 32.93481108550866 34.0 31.0 34.0 31.0 34.0 3 32.83359900255674 34.0 31.0 34.0 31.0 34.0 4 36.35871658091601 37.0 37.0 37.0 35.0 37.0 5 36.3437154761529 37.0 37.0 37.0 35.0 37.0 6 36.423364950601304 37.0 37.0 37.0 35.0 37.0 7 36.566400208326755 37.0 37.0 37.0 35.0 37.0 8 36.498092310848776 37.0 37.0 37.0 35.0 37.0 9 38.35887045863451 39.0 39.0 39.0 37.0 39.0 10 38.07529355133992 39.0 39.0 39.0 35.0 39.0 11 37.88942307692308 39.0 38.0 39.0 35.0 39.0 12 37.72148330229475 39.0 38.0 39.0 35.0 39.0 13 37.69564960070705 39.0 38.0 39.0 35.0 39.0 14 39.00680415706575 41.0 39.0 41.0 35.0 41.0 15 39.10815038982356 41.0 39.0 41.0 35.0 41.0 16 39.216101527729556 41.0 39.0 41.0 35.0 41.0 17 39.20899158801806 41.0 39.0 41.0 35.0 41.0 18 38.93548380732931 40.0 39.0 41.0 35.0 41.0 19 38.70987145292131 40.0 37.0 41.0 35.0 41.0 20 38.43660435276664 40.0 35.0 41.0 35.0 41.0 21 38.37954531106973 40.0 35.0 41.0 35.0 41.0 22 38.31765095798744 40.0 35.0 41.0 35.0 41.0 23 38.266405732142296 40.0 35.0 41.0 35.0 41.0 24 38.18075502667214 40.0 35.0 41.0 35.0 41.0 25 38.060890202329475 40.0 35.0 41.0 35.0 41.0 26 37.938537688204285 40.0 35.0 41.0 35.0 41.0 27 37.80737074271646 40.0 35.0 41.0 35.0 41.0 28 37.6861170733247 40.0 35.0 41.0 34.0 41.0 29 37.56084482813043 40.0 35.0 41.0 34.0 41.0 30 37.43346958744989 40.0 35.0 41.0 34.0 41.0 31 37.23681386319876 40.0 35.0 41.0 33.0 41.0 32 36.93718238060667 39.0 35.0 41.0 33.0 41.0 33 36.58264811716802 39.0 35.0 41.0 32.0 41.0 34 36.2429591079827 39.0 35.0 41.0 31.0 41.0 35 36.02991737950191 39.0 35.0 41.0 30.0 41.0 36 35.91947066064834 39.0 35.0 41.0 30.0 41.0 37 35.7818112591143 39.0 35.0 41.0 29.0 41.0 38 35.725673510937156 39.0 35.0 41.0 29.0 41.0 39 35.65077649064108 39.0 35.0 41.0 27.0 41.0 40 35.600576844165275 39.0 35.0 41.0 27.0 41.0 41 35.47025819892049 38.0 35.0 41.0 25.0 41.0 42 35.433582036551876 38.0 35.0 41.0 25.0 41.0 43 35.36202297907263 38.0 35.0 41.0 25.0 41.0 44 35.30888781919763 38.0 35.0 41.0 24.0 41.0 45 35.24966659827657 38.0 35.0 41.0 24.0 41.0 46 35.174029781256905 38.0 35.0 41.0 24.0 41.0 47 35.09389500015782 38.0 35.0 41.0 23.0 41.0 48 34.98919107667056 37.0 35.0 41.0 23.0 41.0 49 34.928470534389696 37.0 35.0 41.0 24.0 41.0 50 34.82923124270067 37.0 35.0 41.0 23.0 41.0 51 34.73756549666993 37.0 35.0 40.0 23.0 41.0 52 34.537960449480764 36.0 35.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 7.0 15 10.0 16 30.0 17 53.0 18 105.0 19 227.0 20 398.0 21 654.0 22 1041.0 23 1663.0 24 3059.0 25 5645.0 26 8487.0 27 9444.0 28 8833.0 29 8009.0 30 7774.0 31 8410.0 32 9690.0 33 12235.0 34 25042.0 35 41488.0 36 54130.0 37 42991.0 38 51873.0 39 204079.0 40 1515.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.419849436570818 20.495131151163157 23.509556200877498 25.575463211388527 2 42.58013478109908 20.930723462011933 23.32746756731164 13.161674189577349 3 24.27914207253559 21.34205044032701 40.64127552791894 13.73753195921846 4 21.829132603137527 24.560462106625423 40.07153341119283 13.538871879044223 5 21.826370695369466 29.476263375524763 35.776964110981346 12.920401818124427 6 24.763067769325463 34.566853950317224 31.725048136106814 8.945030144250497 7 74.78614942710142 1.9990293866986524 20.069797354881473 3.145023831318456 8 73.01142640699473 2.7244247340677377 20.68984564881159 3.5743032101259433 9 68.33433288090653 4.808678703323759 22.431820333954107 4.4251680818156 10 30.348828951106345 33.94108456172469 25.607225150721252 10.102861336447713 11 22.852024872952242 22.900358258893345 39.930873394147916 14.316743474006502 12 23.237902843975885 19.784334459139547 37.632177014614435 19.34558568227013 13 23.79876740001894 20.750015782330102 39.60516555664279 15.846051261008176 14 15.090472207316688 24.20417600454531 41.23252106941069 19.472830718727312 15 12.003448439127553 31.55755815788643 40.39211199141442 16.046881411571604 16 18.9796329030018 32.119014551308354 36.2551687131088 12.646183832581043 17 18.735401344654527 30.583788390517974 35.12475931946592 15.556050945361575 18 14.994002714560779 30.728985827467568 38.39683090811528 15.880180549856382 19 14.927519649000978 32.869661626842586 35.54200467156971 16.660814052586723 20 14.530396767778795 35.57929042643856 35.32618130740823 14.564131498374419 21 17.312624285849562 32.34095356838483 37.50966667718822 12.836755468577381 22 16.57164388750355 28.936507685994762 38.39762002462043 16.094228401881253 23 14.020430226318615 29.665059499384487 39.26268899340299 17.05182128089391 24 14.475158612417538 30.37526435402923 37.97662636911714 17.172950664436097 25 16.518575802531483 33.17840345948676 34.77162968340646 15.531391054575296 26 15.886296202771376 34.527792683311766 32.697239670464946 16.888671443451912 27 16.50160979767053 31.782259082730974 34.54041854739434 17.175712572204162 28 14.068566333133422 32.54967488399988 34.36464284586977 19.01711593699694 29 14.902465199962123 31.36777563839525 34.520690634765316 19.209068526877306 30 17.1930731353177 31.51100028408194 33.52620655913639 17.769720021463968 31 16.31399734856854 33.69843123638774 32.61260692528645 17.374964489757268 32 17.610121208295194 32.9700767021243 31.48101385688583 17.938788232694673 33 17.8074003345854 33.06319244973328 31.672374609387333 17.457032606293993 34 16.07035762760014 34.46643887503551 32.25809633534295 17.205107162021402 35 16.27592247719453 36.14035226160791 29.701753416874467 17.881971844323097 36 17.650957987437266 36.688393674442096 29.700372462990437 15.960275875130204 37 17.00348789495281 37.019428048357064 30.353958208389887 15.623125848300242 38 17.95417600454531 35.28159622486664 30.208563492314006 16.555664278274044 39 16.624317414223036 36.60494460402134 29.79289637322054 16.977841608535087 40 18.426856791136643 35.18887503551024 30.206787980177392 16.177480193175718 41 16.640691581705124 35.05768441652726 30.065930684006187 18.235693317761434 42 16.027350778068875 35.75269877844765 31.026285470786906 17.193664972696567 43 16.305711625264355 34.853105962564314 32.235803794072154 16.605378618099177 44 17.695543069978854 34.0920030933367 30.32081531517313 17.891638521511315 45 16.280854455351786 33.70277137716612 30.321604431678296 19.694769735803792 46 17.36786244121082 33.9389144913355 29.926651620845302 18.766571446608378 47 16.32169123449386 34.04189419525899 31.53881664088886 18.09759792935829 48 15.88905811053944 34.43763612259714 31.580442536536097 18.092863230327325 49 16.991651147375396 34.125737823932326 30.812434897888323 18.070176130803954 50 16.182806729585554 32.979348821059936 31.98683753669392 18.851006912660583 51 15.731432088633564 33.204641583283355 31.518102332628388 19.54582399545469 52 15.877418642088317 33.886832801994885 31.73175562640068 18.503992929516112 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 884.0 1 1260.5 2 1637.0 3 19203.0 4 36769.0 5 20839.5 6 4910.0 7 5249.0 8 5588.0 9 7165.5 10 8743.0 11 10596.5 12 12450.0 13 13225.5 14 13335.0 15 12669.0 16 11389.0 17 10109.0 18 9378.0 19 8647.0 20 7963.0 21 7279.0 22 7207.5 23 7136.0 24 7003.5 25 6871.0 26 7359.0 27 7847.0 28 8341.5 29 8836.0 30 9373.5 31 9911.0 32 10305.0 33 10699.0 34 11928.5 35 13158.0 36 13619.0 37 14080.0 38 14962.5 39 17273.0 40 18701.0 41 19703.0 42 20705.0 43 22425.5 44 24146.0 45 27437.5 46 30729.0 47 34622.5 48 38516.0 49 37066.5 50 35617.0 51 32284.5 52 28952.0 53 25884.0 54 22816.0 55 20480.0 56 18144.0 57 16216.5 58 14289.0 59 13219.0 60 12149.0 61 10282.5 62 8416.0 63 7077.5 64 4810.5 65 3882.0 66 3280.5 67 2679.0 68 2059.0 69 1439.0 70 1152.5 71 866.0 72 654.0 73 442.0 74 368.0 75 294.0 76 213.5 77 133.0 78 110.5 79 88.0 80 67.0 81 46.0 82 32.0 83 18.0 84 14.0 85 10.0 86 9.0 87 8.0 88 5.5 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 506896.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.835016350623285 #Duplication Level Percentage of deduplicated Percentage of total 1 73.0574474275571 37.138765345146666 2 13.332822407120867 13.555484901318914 3 5.549824245969572 8.463762188608461 4 2.8358590045800334 5.76643755463553 5 1.6081225296054367 4.087446754314902 6 0.9831865305006043 2.9988182012226483 7 0.6605411873662321 2.3505035442015774 8 0.43876596427938325 1.784373997459155 9 0.3055174753594883 1.3977887269770661 >10 1.1850980946035201 9.289932651098127 >50 0.019850652623463215 0.7065736394542046 >100 0.015569139277491501 1.6363382773300312 >500 0.002335370891623725 0.8830686495434013 >1k 0.00467074178324745 3.7426044154410567 >5k 0.0 0.0 >10k+ 3.892284819372875E-4 6.198101153248273 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31325 6.179768631040687 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTC 2337 0.4610413181402102 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG 2167 0.42750386667087525 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTT 1978 0.3902181118020264 No Hit CGTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCT 1881 0.3710820365518765 No Hit CGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGC 1724 0.3401092137243143 Illumina Single End Adapter 1 (95% over 21bp) GCTGAGGCTGACATAACTCTTTTCATGTTTAATTCTTGTCCCTTTAGTAGGG 1606 0.31683027682207 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCT 1409 0.27796628894289954 No Hit CTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGCTT 1330 0.2623812379659733 Illumina Single End Adapter 1 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTGCT 1250 0.24659890786275684 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCC 1103 0.21759887629809663 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTC 1083 0.21365329377229253 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 1047 0.20655124522584514 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGT 915 0.18051040055553802 No Hit GCCATGGATGTTATGGTCAGCTTCGGATTGAAGTCGAGTCAAATTTCAAAAC 823 0.16236072093683912 No Hit CGTCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTCTG 776 0.15308860200119948 No Hit CACCGGCTTCAGCTCTACAGCCAGAAACAGCTGGAATGGGTCACTCAAATCC 742 0.14638111170733248 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 695 0.1371089927716928 No Hit GCCAGATAAGACCTCTTCAGCTCCTTCAGTCCTTCCCCTAATTCCTCCATTG 512 0.1010069126605852 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.27461254379596606 0.0 2 0.0 0.0 0.0 0.6640415390928317 0.0 3 0.0 0.0 0.0 1.189395852403649 0.0 4 0.0 0.0 0.0 1.5845459423629304 0.0 5 0.0 0.0 0.0 2.7242274549414476 0.0 6 0.0 0.0 0.0 4.311732584198731 0.0 7 0.0 0.0 0.0 5.430305230264196 0.0 8 0.0 0.0 0.0 6.776735267194849 0.0 9 0.0 0.0 0.0 7.633123954420631 0.0 10 0.0 0.0 0.0 8.5623086392475 0.0 11 0.0 0.0 0.0 9.702581989204885 0.0 12 0.0 0.0 0.0 10.399371863261893 0.0 13 0.0 0.0 0.0 10.740467472617658 0.0 14 0.0 0.0 0.0 11.006991572235725 0.0 15 0.0 0.0 0.0 11.244121082036552 0.0 16 0.0 0.0 0.0 11.55069284429153 0.0 17 1.9727912629020547E-4 0.0 0.0 11.859237397809412 0.0 18 1.9727912629020547E-4 0.0 0.0 12.163441810548909 0.0 19 1.9727912629020547E-4 0.0 0.0 12.392877434424419 0.0 20 1.9727912629020547E-4 0.0 0.0 12.70181654619488 0.0 21 1.9727912629020547E-4 0.0 0.0 12.966367854550045 0.0 22 1.9727912629020547E-4 0.0 0.0 13.251830750291973 0.0 23 1.9727912629020547E-4 0.0 0.0 13.533150784381807 0.0 24 1.9727912629020547E-4 0.0 0.0 13.763967362141347 0.0 25 1.9727912629020547E-4 0.0 0.0 14.004253337962817 0.0 26 1.9727912629020547E-4 0.0 0.0 14.214750165714467 0.0 27 1.9727912629020547E-4 0.0 0.0 14.45819260755658 0.0 28 1.9727912629020547E-4 0.0 0.0 14.680920741138221 0.0 29 1.9727912629020547E-4 0.0 0.0 14.939553675704682 0.0 30 1.9727912629020547E-4 0.0 0.0 15.276111865155771 0.0 31 1.9727912629020547E-4 0.0 0.0 15.517186957482403 0.0 32 1.9727912629020547E-4 0.0 0.0 15.746425302231621 0.0 33 1.9727912629020547E-4 0.0 0.0 15.963037782898267 0.0 34 1.9727912629020547E-4 0.0 0.0 16.21437138979199 0.0 35 1.9727912629020547E-4 0.0 0.0 16.44597708405669 0.0 36 1.9727912629020547E-4 0.0 0.0 16.67718822006881 0.0 37 1.9727912629020547E-4 0.0 0.0 16.920433382784633 0.0 38 1.9727912629020547E-4 0.0 0.0 17.168413244531422 0.0 39 1.9727912629020547E-4 0.0 0.0 17.632611028692278 0.0 40 1.9727912629020547E-4 0.0 0.0 17.92320318171775 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCGG 35 1.018052E-7 46.000004 2 TTGCGAG 70 0.0 46.000004 1 GTTTGCG 20 6.3081004E-4 46.0 1 GGTACGG 30 1.8593291E-6 46.0 2 GGCCGAT 20 6.3081004E-4 46.0 8 CCAGCGA 45 3.092282E-10 46.0 45 TCGGCCC 55 1.8189894E-12 46.0 8 CGTTATA 30 1.8593291E-6 46.0 11 ATCGTAG 25 3.414435E-5 46.0 1 GTAGCGG 45 3.092282E-10 46.0 2 AATTGCG 20 6.3081004E-4 46.0 1 CGCTAGG 30 1.8593291E-6 46.0 2 CGGGATA 85 0.0 46.0 6 GACGGGC 25 3.414435E-5 46.0 4 CGTACCC 25 3.414435E-5 46.0 37 CCGGTAT 20 6.3081004E-4 46.0 42 TGCGTAC 25 3.414435E-5 46.0 35 CGTTTTT 7305 0.0 44.835045 1 TTCGGAT 135 0.0 44.296295 22 TCGGATT 130 0.0 44.23077 23 >>END_MODULE