##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933085.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 858535 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.530792571065824 33.0 31.0 34.0 31.0 34.0 2 32.91251259412837 34.0 31.0 34.0 31.0 34.0 3 32.909621622880834 34.0 31.0 34.0 31.0 34.0 4 36.376223450412624 37.0 37.0 37.0 35.0 37.0 5 36.2541829977811 37.0 37.0 37.0 35.0 37.0 6 36.34637259983577 37.0 37.0 37.0 35.0 37.0 7 36.547899619701 37.0 37.0 37.0 35.0 37.0 8 36.50734448799408 37.0 37.0 37.0 35.0 37.0 9 38.33809338000198 39.0 39.0 39.0 37.0 39.0 10 38.04825312887652 39.0 39.0 39.0 35.0 39.0 11 37.73219961911862 39.0 38.0 39.0 35.0 39.0 12 37.349377719021355 39.0 37.0 39.0 35.0 39.0 13 37.24189928191629 39.0 37.0 39.0 35.0 39.0 14 38.05239390356829 41.0 37.0 41.0 33.0 41.0 15 38.354699575439554 41.0 37.0 41.0 33.0 41.0 16 38.58307815057045 41.0 37.0 41.0 34.0 41.0 17 38.622496461996306 41.0 37.0 41.0 35.0 41.0 18 38.499089728432736 40.0 37.0 41.0 35.0 41.0 19 38.38539954690257 40.0 37.0 41.0 35.0 41.0 20 38.16787084976151 40.0 35.0 41.0 34.0 41.0 21 38.12913393163936 40.0 35.0 41.0 34.0 41.0 22 38.07762642175334 40.0 35.0 41.0 34.0 41.0 23 38.05749561753452 40.0 35.0 41.0 34.0 41.0 24 38.00698864926881 40.0 35.0 41.0 34.0 41.0 25 37.865540717617804 40.0 35.0 41.0 34.0 41.0 26 37.76109884862003 40.0 35.0 41.0 34.0 41.0 27 37.651566913404814 40.0 35.0 41.0 34.0 41.0 28 37.62533851269896 40.0 35.0 41.0 34.0 41.0 29 37.54840862632275 40.0 35.0 41.0 34.0 41.0 30 37.463421992114476 40.0 35.0 41.0 34.0 41.0 31 37.28728706459259 40.0 35.0 41.0 33.0 41.0 32 37.07735269965698 40.0 35.0 41.0 33.0 41.0 33 36.86448426680333 40.0 35.0 41.0 33.0 41.0 34 36.57430390141345 39.0 35.0 41.0 31.0 41.0 35 36.41764750417863 39.0 35.0 41.0 31.0 41.0 36 36.30581746812885 39.0 35.0 41.0 31.0 41.0 37 36.15908961195525 39.0 35.0 41.0 30.0 41.0 38 36.11170307558807 39.0 35.0 41.0 30.0 41.0 39 36.05702504848375 39.0 35.0 41.0 30.0 41.0 40 35.98293604803531 39.0 35.0 41.0 30.0 41.0 41 35.844981276243836 39.0 35.0 41.0 29.0 41.0 42 35.87630090794202 39.0 35.0 41.0 30.0 41.0 43 35.82730465269325 39.0 35.0 41.0 29.0 41.0 44 35.781742153785224 38.0 35.0 41.0 30.0 41.0 45 35.72547187942251 38.0 35.0 41.0 29.0 41.0 46 35.68872789111684 38.0 35.0 41.0 29.0 41.0 47 35.60988660916561 38.0 35.0 41.0 29.0 41.0 48 35.50388860093066 38.0 35.0 41.0 28.0 41.0 49 35.474966075931675 38.0 35.0 41.0 28.0 41.0 50 35.38903015019772 37.0 35.0 41.0 28.0 41.0 51 35.31941039095669 37.0 35.0 40.0 28.0 41.0 52 35.091462782530705 37.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 9.0 15 18.0 16 40.0 17 115.0 18 212.0 19 414.0 20 671.0 21 1107.0 22 1815.0 23 3042.0 24 5256.0 25 8925.0 26 11728.0 27 12546.0 28 12580.0 29 12063.0 30 12413.0 31 14227.0 32 17336.0 33 24622.0 34 65237.0 35 87923.0 36 52540.0 37 59481.0 38 98971.0 39 353261.0 40 1977.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.26351866842936 21.36371842732096 24.39026947066806 17.982493433581624 2 40.692342187563696 22.220177395213938 24.280780632123328 12.806699785099035 3 31.914132795983857 22.515913736772525 32.44096047336451 13.128992993879107 4 28.730919531527544 25.520799967386303 31.977496549354424 13.77078395173173 5 24.581176073194452 29.804609014192785 31.035543105406305 14.578671807206462 6 26.922024145783226 35.52481844071587 28.55352431758752 8.999633095913387 7 84.06238534247294 1.5941108982161474 12.270553908693298 2.0729498506176216 8 82.41469479986256 1.7782618064493585 12.822074813490422 2.984968580197662 9 77.17693512786316 3.4776683536489488 14.70644761133792 4.638948907149971 10 46.33835545434956 22.065378813909742 20.07268195239565 11.523583779345046 11 31.24986168298322 22.636584414147357 30.679587902648116 15.433966000221307 12 29.812529483364102 18.191221091743493 33.983588321967076 18.012661102925332 13 28.52032823356066 18.682872567804456 36.806769671591724 15.990029527043163 14 18.8423302486212 20.66019440092716 40.963618256681436 19.5338570937702 15 16.100566662978213 26.3550117351069 40.01537502839139 17.5290465735235 16 28.187901483340806 23.909916310925006 32.241551014227724 15.66063119150646 17 25.862894349094677 22.281910463755118 30.90532127403076 20.94987391311944 18 22.646135568148065 22.72953344942256 35.8011030418096 18.823227940619777 19 22.405726033300912 24.63009661807614 31.435060888606753 21.52911646001619 20 18.22593138311193 34.09598909770714 30.03837933223456 17.63970018694637 21 23.281287309195314 24.846744745409328 36.216345285864875 15.65562265953048 22 20.15957415830455 21.327610406098763 38.58235249582137 19.930462939775314 23 20.64959494953613 23.02200842132237 37.01840926694893 19.309987362192572 24 21.460860652157454 26.736359030208433 32.63722504033033 19.165555277303778 25 23.42152620452282 24.73271328483987 32.63943811259879 19.20632239803852 26 19.14225977974107 27.337033434862878 29.565713686687207 23.954993098708847 27 22.40514364586185 24.005311373444297 34.00001164774878 19.589533332945074 28 17.963507603068017 27.144379670019276 30.40761296860349 24.484499758309212 29 21.409028170080425 27.953898210323402 29.637463819180347 20.999609800415826 30 25.77041122377073 23.32636409697916 29.93320016073893 20.970024518511185 31 23.25647760429103 23.66775961376065 33.60154216193865 19.474220620009667 32 25.994280955348355 23.66880791115097 29.901634761541462 20.435276371959212 33 26.884401917219446 22.897843419313133 31.529058221272283 18.688696442195134 34 20.62129091999744 23.96163231551422 36.49915262627616 18.917924138212186 35 23.389494895374096 27.86246338238977 30.18001595741583 18.5680257648203 36 28.167168490509997 24.76090083689075 27.65059083205693 19.42133984054232 37 22.601757645291105 26.85807800497359 30.89833262476195 19.641831724973354 38 25.192333451752113 23.535091755141025 32.12751955365827 19.145055239448595 39 23.804271229478122 25.577058594000246 28.44741332618938 22.171256850332252 40 28.346427344255037 23.25775885665698 30.555422900638877 17.8403908984491 41 22.415626619765064 23.92936805138987 28.809192403338248 24.84581292550682 42 21.716412260420366 25.87885176492513 32.01593412033289 20.388801854321606 43 21.132743568986704 25.505424938994913 32.92387613783946 20.43795535417892 44 25.443575392965922 24.317005130833337 28.837496432876936 21.4019230433238 45 21.260053463166905 23.51354341989552 28.677106932157688 26.549296184779887 46 23.45961434303785 23.67835906515168 30.048629351162155 22.813397240648314 47 20.0429801930032 23.718776753422983 33.39514405353305 22.843099000040766 48 20.987030231731964 27.973932338227332 29.824060754657644 21.214976675383067 49 24.39015299318024 24.753562755158498 30.39270385016336 20.4635804014979 50 22.098225465473163 24.658517125102648 30.181763119733034 23.061494289691158 51 21.550198885310444 25.24835912339043 29.04797125335601 24.153470737943124 52 21.786648185571934 25.483643648773786 30.32211849254835 22.407589673105928 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 373.0 1 1501.5 2 2630.0 3 13166.5 4 23703.0 5 14309.0 6 4915.0 7 5034.5 8 5154.0 9 5798.0 10 6442.0 11 7028.5 12 7615.0 13 7651.5 14 7423.0 15 7158.0 16 6671.0 17 6184.0 18 5837.0 19 5490.0 20 5348.5 21 5207.0 22 5111.0 23 5015.0 24 5473.5 25 5932.0 26 6380.0 27 6828.0 28 8141.0 29 9454.0 30 10463.0 31 11472.0 32 12225.5 33 12979.0 34 15370.0 35 17761.0 36 18776.5 37 19792.0 38 21498.0 39 24685.0 40 26166.0 41 28280.5 42 30395.0 43 35125.5 44 39856.0 45 44260.5 46 48665.0 47 56945.5 48 65226.0 49 72708.5 50 80191.0 51 78105.5 52 76020.0 53 67883.0 54 59746.0 55 55652.0 56 51558.0 57 48160.0 58 44762.0 59 46605.0 60 48448.0 61 37598.0 62 26748.0 63 22773.5 64 16573.0 65 14347.0 66 12280.5 67 10214.0 68 8992.0 69 7770.0 70 6574.0 71 5378.0 72 4413.5 73 3449.0 74 2838.5 75 2228.0 76 1983.5 77 1739.0 78 1308.0 79 877.0 80 633.5 81 390.0 82 326.5 83 263.0 84 227.0 85 191.0 86 140.0 87 89.0 88 53.0 89 9.0 90 1.0 91 3.0 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 858535.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.97895578916241 #Duplication Level Percentage of deduplicated Percentage of total 1 71.96480088962572 21.574295842459648 2 9.070765953037698 5.438641829599136 3 3.538108361493686 3.1820638243945516 4 2.0985394369007873 2.516480840026499 5 1.4523819193440684 2.1770446674497332 6 1.1720712369242152 2.1082483076099967 7 0.9927872148355847 2.083390681512117 8 0.8871662427160056 2.127705405441637 9 0.7613154584903918 2.054109822452043 >10 7.949874297706209 46.1983670750126 >50 0.07635084081226756 1.47611884508833 >100 0.024151795467676523 1.4703964931141966 >500 0.006622266499201597 1.3352802400339674 >1k 0.003895450881883292 1.9649663563767308 >5k 3.8954508818832924E-4 0.6052787724414951 >10k+ 7.790901763766585E-4 3.6876109969872832 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18171 2.116512431059887 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 13406 1.5614972016283553 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5183 0.6037028193375925 No Hit GGGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCT 4432 0.5162282259896219 No Hit CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCTT 1752 0.20406855864932705 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 1641 0.1911395575020238 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1587 0.18484977316009246 No Hit CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCT 1466 0.17075599713465378 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1410 0.1642332578170954 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCT 1264 0.14722754459631815 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCAGTTGTGGTCG 1199 0.13965650788843786 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 1073 0.12498034442393147 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1002 0.11671044278916992 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCAGTTGTGGT 867 0.10098598193434163 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2102418655034448 0.0 2 0.0 0.0 0.0 0.5324185967957044 0.0 3 0.0 0.0 0.0 0.8926834666029924 0.0 4 0.0 0.0 0.0 1.2572580034593814 0.0 5 0.0 0.0 0.0 2.6565020645634716 0.0 6 0.0 0.0 0.0 3.7899444984770567 0.0 7 0.0 0.0 0.0 4.586999947585131 0.0 8 0.0 0.0 0.0 6.00231790200749 0.0 9 0.0 0.0 0.0 6.931924732247375 0.0 10 0.0 0.0 0.0 8.036713704158828 0.0 11 0.0 0.0 0.0 9.370031507160453 0.0 12 0.0 0.0 0.0 10.175473335391102 0.0 13 0.0 0.0 0.0 10.586172957421654 0.0 14 0.0 0.0 0.0 11.233438357201512 0.0 15 0.0 0.0 0.0 11.561438962884449 0.0 16 0.0 0.0 0.0 11.918558940520771 0.0 17 0.0 0.0 0.0 12.314232966623376 0.0 18 0.0 0.0 0.0 12.808330469928425 0.0 19 0.0 0.0 0.0 13.110240118341128 0.0 20 0.0 0.0 0.0 13.525132929932967 0.0 21 0.0 0.0 0.0 13.894599521277526 0.0 22 0.0 0.0 0.0 14.291205367282638 0.0 23 0.0 0.0 0.0 14.657876498919672 0.0 24 0.0 0.0 0.0 14.967590139015881 0.0 25 0.0 0.0 0.0 15.332514108335712 0.0 26 0.0 0.0 0.0 15.63919933374877 0.0 27 0.0 0.0 0.0 16.064575119243827 0.0 28 0.0 0.0 0.0 16.417152474855424 0.0 29 0.0 0.0 0.0 16.826920276983465 0.0 30 0.0 0.0 0.0 17.753498692540198 0.0 31 0.0 0.0 0.0 18.155462502984737 0.0 32 0.0 0.0 0.0 18.463079548300303 0.0 33 0.0 0.0 0.0 18.849784807841264 0.0 34 0.0 0.0 0.0 19.23858666216287 0.0 35 1.1647748781354283E-4 0.0 0.0 19.6172549750447 0.0 36 1.1647748781354283E-4 0.0 0.0 19.90204243274881 0.0 37 1.1647748781354283E-4 0.0 0.0 20.29037837711916 0.0 38 1.1647748781354283E-4 0.0 0.0 20.697583674515307 0.0 39 1.1647748781354283E-4 0.0 0.0 21.95449224551125 0.0 40 1.1647748781354283E-4 0.0 0.0 22.335606585637162 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCA 20 6.310556E-4 46.000004 26 ATTAGCG 25 3.4164288E-5 46.0 1 GCGATTA 30 1.8608498E-6 46.0 9 CATACGA 175 0.0 44.68571 18 CGTTTTT 6200 0.0 44.14516 1 CGTAAGG 110 0.0 43.909092 2 TACGAAA 180 0.0 43.444443 20 GGGCGAT 620 0.0 42.661293 7 ATACGAA 185 0.0 42.270267 19 TACGAAT 60 1.8189894E-12 42.166668 12 GCAAGGC 1620 0.0 41.882713 46 CGACGCG 55 4.7293724E-11 41.81818 15 ACGCGCA 55 4.7293724E-11 41.81818 17 ATCGTAG 50 8.712959E-10 41.399998 1 AACGACG 50 8.712959E-10 41.399998 13 AGGGCGA 370 0.0 41.027023 6 AACACGT 440 0.0 40.772728 41 CACGACC 460 0.0 40.5 27 CGGGTAT 40 2.909419E-7 40.250004 6 GGCCGAT 40 2.909419E-7 40.250004 8 >>END_MODULE