##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933084.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 739596 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3820315415443 33.0 31.0 34.0 31.0 34.0 2 32.74820983347666 34.0 31.0 34.0 31.0 34.0 3 32.79233933120244 34.0 31.0 34.0 31.0 34.0 4 36.258925142915864 37.0 37.0 37.0 35.0 37.0 5 36.13013996830702 37.0 35.0 37.0 35.0 37.0 6 36.225935510738296 37.0 37.0 37.0 35.0 37.0 7 36.46698738230061 37.0 37.0 37.0 35.0 37.0 8 36.38820518228871 37.0 37.0 37.0 35.0 37.0 9 38.229071006333186 39.0 39.0 39.0 37.0 39.0 10 37.92754017057961 39.0 38.0 39.0 35.0 39.0 11 37.61983434199212 39.0 37.0 39.0 35.0 39.0 12 37.16951011092542 39.0 35.0 39.0 35.0 39.0 13 37.03255966771048 39.0 35.0 39.0 33.0 39.0 14 37.74647645471311 40.0 35.0 41.0 33.0 41.0 15 38.022821918993614 40.0 35.0 41.0 33.0 41.0 16 38.29339125684833 40.0 35.0 41.0 34.0 41.0 17 38.361066041460475 40.0 35.0 41.0 35.0 41.0 18 38.346740653005156 40.0 36.0 41.0 35.0 41.0 19 38.269168573112886 40.0 36.0 41.0 35.0 41.0 20 38.09365383263295 40.0 35.0 41.0 34.0 41.0 21 38.05657007339142 40.0 35.0 41.0 34.0 41.0 22 37.9949215517661 40.0 35.0 41.0 34.0 41.0 23 37.967426811394326 40.0 35.0 41.0 34.0 41.0 24 37.902629273278926 40.0 35.0 41.0 34.0 41.0 25 37.768777819241855 40.0 35.0 41.0 34.0 41.0 26 37.65620014169898 40.0 35.0 41.0 34.0 41.0 27 37.53731902281786 39.0 35.0 41.0 34.0 41.0 28 37.525853303695534 39.0 35.0 41.0 34.0 41.0 29 37.47291088648397 39.0 35.0 41.0 34.0 41.0 30 37.40891919372198 39.0 35.0 41.0 34.0 41.0 31 37.296344220358144 39.0 35.0 41.0 33.0 41.0 32 37.19852595200623 39.0 35.0 41.0 33.0 41.0 33 37.086928539364735 39.0 35.0 41.0 33.0 41.0 34 36.9447590306059 39.0 35.0 41.0 33.0 41.0 35 36.86845115441403 39.0 35.0 41.0 33.0 41.0 36 36.769256458931636 39.0 35.0 41.0 32.0 41.0 37 36.61673400072472 39.0 35.0 41.0 32.0 41.0 38 36.64283473680226 39.0 35.0 41.0 32.0 41.0 39 36.60844569197237 39.0 35.0 41.0 32.0 41.0 40 36.50016360283182 39.0 35.0 41.0 32.0 41.0 41 36.339999134662705 39.0 35.0 41.0 31.0 41.0 42 36.344658435145675 38.0 35.0 41.0 31.0 41.0 43 36.27163613648533 38.0 35.0 41.0 31.0 41.0 44 36.24426037999124 38.0 35.0 41.0 31.0 41.0 45 36.210765066333515 38.0 35.0 41.0 31.0 41.0 46 36.14681393625709 38.0 35.0 41.0 31.0 41.0 47 36.03622383030736 38.0 35.0 41.0 31.0 41.0 48 35.924718359753165 38.0 35.0 41.0 31.0 41.0 49 35.88281034510733 37.0 35.0 40.0 31.0 41.0 50 35.719774038799564 37.0 35.0 40.0 31.0 41.0 51 35.527232435005054 37.0 35.0 40.0 30.0 41.0 52 35.17963590933429 36.0 35.0 39.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 0.0 13 3.0 14 4.0 15 16.0 16 35.0 17 94.0 18 195.0 19 262.0 20 519.0 21 838.0 22 1406.0 23 2200.0 24 3287.0 25 4774.0 26 6248.0 27 7102.0 28 8071.0 29 9287.0 30 10698.0 31 13139.0 32 16863.0 33 22771.0 34 57571.0 35 96682.0 36 50776.0 37 52597.0 38 85169.0 39 287809.0 40 1178.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.59295615444107 23.250936998036767 24.41860150676856 14.737505340753602 2 36.28278141039162 23.53014348373977 26.69159919739966 13.495475908468949 3 32.3678062077134 23.5900410494378 30.636996414258594 13.405156328590204 4 28.391446140866094 27.116020097458616 30.324528526384675 14.168005235290618 5 23.923195906954607 31.319125576666178 29.557488142174915 15.200190374204295 6 25.624800566795926 37.79306540327422 26.288135684887425 10.293998345042429 7 84.50032179730556 1.6530646461040892 10.44002401310986 3.4065895434804947 8 81.24597753368054 2.0877614265085263 10.939891508336984 5.72636953147394 9 76.32166750496216 3.313295366659636 14.185311981135648 6.179725147242548 10 49.101671723481466 16.91558634714087 19.783773844098672 14.19896808527899 11 32.503826413339176 23.01432133218676 28.243257129568033 16.23859512490603 12 31.959745590836082 17.946960232343063 31.41282538034278 18.680468796478078 13 28.000421851929975 22.956451900767448 33.78033412836197 15.26279211894061 14 16.2582004229336 26.26190514821605 37.87067534167302 19.609219087177323 15 12.715861091731162 30.24651296113013 39.82444469683449 17.21318125030422 16 22.646688191931812 26.123992017263483 35.39067274566114 15.838647045143563 17 20.635725450110602 26.054629824931446 28.808565757521677 24.50107896743628 18 18.65910578207562 25.73499586260607 35.74018788635958 19.865710468958728 19 19.89816061741816 28.07776137242495 29.247859642291196 22.7762183678657 20 17.15855683373085 36.090649489721415 27.556260444891535 19.1945332316562 21 21.237675704033013 29.007322916835676 33.1257875921449 16.62921378698641 22 17.696282835493975 25.664687207610644 33.70002001092489 22.939009945970504 23 18.225220255382666 27.2304068707781 32.06520857332922 22.479164300510007 24 19.55554113326735 29.79883612134192 30.510440835266824 20.135181910123904 25 20.93237389061055 26.677537466400576 30.664443831497195 21.72564481149168 26 17.243332846581104 30.885510467877058 27.189303349396155 24.68185333614568 27 21.829755704465683 27.776921454415653 29.779636450170095 20.613686390948573 28 16.29186745196026 30.953114943834205 27.720133694611654 25.034883909593887 29 20.35665417335951 29.1674103159022 27.012990876099924 23.46294463463837 30 24.391965343241445 26.280428774628312 27.599392100552194 21.728213781578052 31 21.644249022439276 27.956478942557826 29.538153262051175 20.86111877295172 32 27.155771529321417 25.25351678483929 24.350050568148017 23.240661117691282 33 25.304896186566722 24.992293089740887 29.111569018761596 20.5912417049308 34 19.1415313225058 25.87480191888545 31.274777040438295 23.70888971817046 35 22.393577033948265 27.34384718143419 26.461338352289626 23.80123743232792 36 26.143056479483395 24.816386243300396 27.65117712913537 21.389380148080843 37 20.22117480354139 29.380634833071028 27.984602404556004 22.41358795883158 38 23.61356740707089 25.685238968301615 27.87075646704417 22.83043715758333 39 22.20144511327806 25.44645995922098 27.840199243911538 24.51189568358942 40 26.53732578326546 23.42860156085214 28.917273754860762 21.11679890102164 41 22.8311132023429 23.971465502788007 26.140893136252764 27.056528158616327 42 21.8885715985484 25.794758219352186 30.489077820864363 21.82759236123505 43 21.079751648197124 25.413063348098152 32.15039021303522 21.3567947906695 44 22.593551073829495 25.391429915791864 27.821946035403112 24.19307297497553 45 19.205620365713173 24.73512566319991 26.28556671480105 29.773687256285864 46 23.6752226891438 24.05637672459018 28.75515822151553 23.513242364750486 47 19.04918360834834 25.404815602031377 31.612934629175925 23.933066160444348 48 19.44548104640912 27.19768630441484 29.67336221396546 23.683470435210573 49 24.61222072590982 23.111266150709305 29.901594924796782 22.374918198584094 50 21.884785747894796 23.22930356573048 29.76625076393058 25.119659922444143 51 19.716710203949184 24.38331197031893 27.19038502101147 28.709592804720412 52 19.642074862492496 25.212954099265005 31.74287043196556 23.40210060627694 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 600.0 1 1394.0 2 2188.0 3 7493.5 4 12799.0 5 7397.5 6 1996.0 7 2528.5 8 3061.0 9 4065.0 10 5069.0 11 6643.0 12 8217.0 13 8623.0 14 8632.0 15 8235.0 16 7011.5 17 5788.0 18 5179.5 19 4571.0 20 4254.5 21 3938.0 22 3826.0 23 3714.0 24 3519.5 25 3325.0 26 4085.0 27 4845.0 28 5368.0 29 5891.0 30 6424.0 31 6957.0 32 7830.0 33 8703.0 34 9833.5 35 10964.0 36 10777.0 37 10590.0 38 13147.0 39 17029.5 40 18355.0 41 24077.0 42 29799.0 43 32427.5 44 35056.0 45 39516.0 46 43976.0 47 52212.5 48 60449.0 49 74422.0 50 88395.0 51 87577.5 52 86760.0 53 76965.0 54 67170.0 55 57735.5 56 48301.0 57 43247.0 58 38193.0 59 37186.5 60 36180.0 61 27524.0 62 18868.0 63 15572.0 64 9974.5 65 7673.0 66 6284.0 67 4895.0 68 3755.5 69 2616.0 70 2238.0 71 1860.0 72 1476.5 73 1093.0 74 922.5 75 752.0 76 594.0 77 436.0 78 299.0 79 162.0 80 112.5 81 63.0 82 68.5 83 74.0 84 39.5 85 5.0 86 3.0 87 1.0 88 2.0 89 1.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 739596.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.964728780586693 #Duplication Level Percentage of deduplicated Percentage of total 1 68.44510825488472 14.349331309215533 2 12.16310836757638 5.099925361102466 3 5.511155200566878 3.466196221428134 4 3.0332799416741123 2.5436756517116628 5 1.8156484976573655 1.903228915713318 6 1.2027637457079106 1.512936942953333 7 0.900498102493022 1.3215088940339415 8 0.6104528187471827 1.0238382222703466 9 0.5003338977467895 0.9440428019395711 >10 3.8255232198739817 16.543291431600192 >50 1.0131984753207655 15.529966885666957 >100 0.9640580259752785 29.049792202739784 >500 0.0071124334578994385 0.951052211562238 >1k 0.005819263738281359 2.106385449752796 >5k 6.465848598090399E-4 0.7103069539033819 >10k+ 0.0012931697196180798 2.9445205444063474 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10977 1.484188665163143 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 10745 1.4528201883190281 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5240 0.7084949080308709 No Hit CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCTT 3062 0.41400981076155097 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 2830 0.382641333917436 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 2618 0.35397703611160686 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1422 0.192267129622118 No Hit GGGGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCT 1158 0.15657196631674591 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGTACTCGGTCG 1146 0.15494945889377446 No Hit CGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 1138 0.15386778727846012 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCG 1131 0.1529213246150601 No Hit TCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 1034 0.13980605627937415 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGTACTCGGT 823 0.11127696742545931 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 811 0.10965446000248784 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4323982282218941 0.0 2 0.0 0.0 0.0 1.4279417411667992 0.0 3 0.0 0.0 0.0 2.12697202256367 0.0 4 0.0 0.0 0.0 2.952828300856143 0.0 5 0.0 0.0 0.0 5.239211677726759 0.0 6 0.0 0.0 0.0 7.231786002087627 0.0 7 0.0 0.0 0.0 8.877008528980687 0.0 8 0.0 0.0 0.0 11.842411262364859 0.0 9 0.0 0.0 0.0 13.362024672929545 0.0 10 0.0 0.0 0.0 15.005895110303463 0.0 11 0.0 0.0 0.0 17.560803465675857 0.0 12 0.0 0.0 0.0 18.900183343338796 0.0 13 0.0 0.0 0.0 19.435475583967463 0.0 14 0.0 0.0 0.0 19.650863444366923 0.0 15 0.0 0.0 0.0 19.984423928739474 0.0 16 0.0 0.0 0.0 20.678451478915516 0.0 17 0.0 0.0 0.0 21.429672415751302 0.0 18 0.0 0.0 0.0 22.20685347135463 0.0 19 0.0 0.0 0.0 22.664400564632583 0.0 20 0.0 0.0 0.0 23.20753492447228 0.0 21 0.0 0.0 0.0 23.74891156793709 0.0 22 0.0 0.0 0.0 24.25851410770204 0.0 23 0.0 0.0 0.0 24.734314409488423 0.0 24 0.0 0.0 0.0 25.08288308752346 0.0 25 1.3520895191428833E-4 0.0 0.0 25.456735839566466 0.0 26 1.3520895191428833E-4 0.0 0.0 25.791783622410072 0.0 27 1.3520895191428833E-4 0.0 0.0 26.215258059805624 0.0 28 1.3520895191428833E-4 0.0 0.0 26.559635260331316 0.0 29 1.3520895191428833E-4 0.0 0.0 26.979594264977095 0.0 30 1.3520895191428833E-4 0.0 0.0 28.01894547834223 0.0 31 1.3520895191428833E-4 0.0 0.0 28.414161244787696 0.0 32 1.3520895191428833E-4 0.0 0.0 28.702967566076616 0.0 33 1.3520895191428833E-4 0.0 0.0 29.043423706996794 0.0 34 1.3520895191428833E-4 0.0 0.0 29.421197518645315 0.0 35 1.3520895191428833E-4 0.0 0.0 29.80221634513978 0.0 36 1.3520895191428833E-4 0.0 0.0 30.0919691290921 0.0 37 1.3520895191428833E-4 0.0 0.0 30.462847284192993 0.0 38 1.3520895191428833E-4 0.0 0.0 30.882400661983027 0.0 39 1.3520895191428833E-4 0.0 0.0 32.20663713703157 0.0 40 1.3520895191428833E-4 0.0 0.0 32.57061963558483 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCA 40 5.6061253E-9 46.000004 20 GTTTGTC 20 6.309987E-4 46.000004 24 TATCACG 20 6.309987E-4 46.000004 14 CAGCGAC 20 6.309987E-4 46.000004 28 ACCGGTG 20 6.309987E-4 46.000004 42 CGAACCG 20 6.309987E-4 46.000004 26 TCCGCTT 20 6.309987E-4 46.000004 18 TCACCCG 20 6.309987E-4 46.000004 31 CGCGGTG 20 6.309987E-4 46.000004 16 CTCCGAC 20 6.309987E-4 46.000004 27 CAACGAA 20 6.309987E-4 46.000004 43 TCATTCG 20 6.309987E-4 46.000004 46 GGCAATT 40 5.6061253E-9 46.000004 8 ATCAGCG 20 6.309987E-4 46.000004 1 CCAATTG 20 6.309987E-4 46.000004 24 GATCCGT 20 6.309987E-4 46.000004 18 GGTCAAC 20 6.309987E-4 46.000004 9 TTCCGCT 20 6.309987E-4 46.000004 31 GTGGCTA 20 6.309987E-4 46.000004 11 TCGATTA 20 6.309987E-4 46.000004 11 >>END_MODULE