##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933082.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1277616 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.506124688482295 33.0 31.0 34.0 31.0 34.0 2 32.90111504552228 34.0 31.0 34.0 31.0 34.0 3 32.944338517989756 34.0 31.0 34.0 31.0 34.0 4 36.394827553818985 37.0 37.0 37.0 35.0 37.0 5 36.314162471352894 37.0 37.0 37.0 35.0 37.0 6 36.395610261612255 37.0 37.0 37.0 35.0 37.0 7 36.52926622709797 37.0 37.0 37.0 35.0 37.0 8 36.48200711324843 37.0 37.0 37.0 35.0 37.0 9 38.311984195564236 39.0 39.0 39.0 37.0 39.0 10 38.017884873076106 39.0 39.0 39.0 35.0 39.0 11 37.69644243653805 39.0 37.0 39.0 35.0 39.0 12 37.220382337102855 39.0 35.0 39.0 35.0 39.0 13 37.07230732864961 39.0 35.0 39.0 34.0 39.0 14 37.94334291367672 40.0 36.0 41.0 33.0 41.0 15 38.19133370277141 40.0 36.0 41.0 33.0 41.0 16 38.41622991571803 40.0 36.0 41.0 34.0 41.0 17 38.45277610800115 40.0 36.0 41.0 35.0 41.0 18 38.34713560255977 40.0 36.0 41.0 35.0 41.0 19 38.2657817372356 40.0 36.0 41.0 35.0 41.0 20 38.08923729821793 40.0 35.0 41.0 34.0 41.0 21 38.03796837234349 40.0 35.0 41.0 34.0 41.0 22 38.00495767116254 40.0 35.0 41.0 34.0 41.0 23 37.95993944972511 40.0 35.0 41.0 34.0 41.0 24 37.91518108727505 40.0 35.0 41.0 34.0 41.0 25 37.79942877985248 40.0 35.0 41.0 34.0 41.0 26 37.68341113448798 40.0 35.0 41.0 34.0 41.0 27 37.58337481684637 40.0 35.0 41.0 34.0 41.0 28 37.54800894791549 40.0 35.0 41.0 34.0 41.0 29 37.49325384152985 40.0 35.0 41.0 34.0 41.0 30 37.43734032761017 40.0 35.0 41.0 34.0 41.0 31 37.29974734192433 40.0 35.0 41.0 33.0 41.0 32 37.15009830809883 40.0 35.0 41.0 33.0 41.0 33 36.997812331717824 39.0 35.0 41.0 33.0 41.0 34 36.78418241474747 39.0 35.0 41.0 32.0 41.0 35 36.659908767579616 39.0 35.0 41.0 32.0 41.0 36 36.56064419982217 39.0 35.0 41.0 32.0 41.0 37 36.42866009818287 39.0 35.0 41.0 31.0 41.0 38 36.40195723910784 39.0 35.0 41.0 31.0 41.0 39 36.34413548358818 39.0 35.0 41.0 31.0 41.0 40 36.24328671525716 39.0 35.0 41.0 31.0 41.0 41 36.10170035441009 38.0 35.0 41.0 31.0 41.0 42 36.106580537501095 38.0 35.0 41.0 31.0 41.0 43 36.05432070356038 38.0 35.0 41.0 31.0 41.0 44 36.0052300534746 38.0 35.0 41.0 31.0 41.0 45 35.944729089178594 38.0 35.0 41.0 31.0 41.0 46 35.86420880765426 38.0 35.0 41.0 31.0 41.0 47 35.775169534508024 37.0 35.0 41.0 31.0 41.0 48 35.67328367835093 37.0 35.0 41.0 30.0 41.0 49 35.61376892587444 37.0 35.0 40.0 30.0 41.0 50 35.49739436575622 37.0 35.0 40.0 30.0 41.0 51 35.41075800553531 36.0 35.0 40.0 29.0 41.0 52 35.163816044883596 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 3.0 14 10.0 15 35.0 16 78.0 17 169.0 18 337.0 19 583.0 20 1065.0 21 1708.0 22 2761.0 23 4345.0 24 6708.0 25 10383.0 26 13696.0 27 14879.0 28 15530.0 29 16059.0 30 17915.0 31 21209.0 32 26622.0 33 36695.0 34 102309.0 35 155695.0 36 77944.0 37 94396.0 38 153810.0 39 499500.0 40 3168.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.72284943206722 22.96143755244142 25.485435373382927 14.830277642108427 2 36.72848492817874 23.14733065334185 26.714991045822845 13.409193372656572 3 31.08453557250379 23.934108527131784 31.36732789821042 13.614028002154011 4 27.973585177392895 27.089829808017434 30.82898147800278 14.107603536586893 5 25.867396776496225 31.647850371316576 28.548875405442637 13.935877446744563 6 28.85632302663711 37.93205470188226 24.288988240598115 8.922634030882518 7 86.55041890521096 1.8385023356000552 9.580421660342388 2.0306570988466017 8 85.0507507733153 2.2758794504765123 10.129256364979774 2.544113411228413 9 79.5853370652841 4.274523800578577 12.214076843120312 3.9260622910170193 10 50.74779902568534 18.701941741493535 17.99805262301036 12.552206609810773 11 35.051533481108564 23.366567106235365 25.91772488760316 15.664174525052912 12 34.55975817460019 18.30150843445918 29.358977971471866 17.77975541946876 13 30.113899638075914 21.196666290966924 31.791477251380694 16.89795681957646 14 20.804686228099836 21.0042767153824 36.80182464840766 21.389212408110104 15 16.866178883169905 26.263525190667618 37.97815619090556 18.892139735256915 16 27.66832913801956 23.92252445179146 31.027397903595443 17.38174850659353 17 27.05343389563061 23.791107813302276 28.49878210667368 20.656676184393433 18 23.866952198469647 23.337685188663887 33.31799226058534 19.477370352281124 19 23.6316702358142 24.964386795406448 29.422690385843637 21.981252582935717 20 20.440414021114325 32.293819113098145 28.915260923469965 18.350505942317564 21 24.47668156942305 25.77104544714531 33.26649008778851 16.485782895643137 22 22.395618088690185 22.86547757698714 34.034091620643444 20.704812713679228 23 21.569313471340372 22.885827979612028 35.02453006224092 20.520328486806676 24 22.655868429950786 25.280992097782118 31.306120148777094 20.75701932349 25 24.34643899262376 24.362797585503 31.08046549197881 20.210297929894427 26 20.616679816157593 26.80954214724925 28.421685389037084 24.152092647556074 27 22.172781179947656 24.82154262313559 32.025819964684224 20.97985623223253 28 18.711412505792037 27.241048953676223 28.960423163141353 25.08711537739039 29 21.334735945698863 27.54395686966976 28.503321811874617 22.61798537275676 30 24.451634920038572 25.397615558978597 27.837707104482096 22.313042416500732 31 23.677145558602895 25.170004132697148 30.18755244142215 20.965297867277805 32 27.308831448572967 25.489348912349254 26.20630925097995 20.99551038809783 33 25.964687355199057 24.81637675170004 27.70128113611602 21.517654756984882 34 22.153917922129967 24.855825224480597 31.567074927051635 21.423181926337804 35 22.111495159735007 29.033371529473644 27.405339319482536 21.449793991308812 36 25.520187599403886 27.791370803120813 24.98614607205921 21.702295525416087 37 22.691559905323665 29.73005973625878 26.089764060562796 21.488616297854755 38 24.25752338730886 27.699011283515546 27.054686228099833 20.988779101075753 39 22.08777911359908 28.48539780340885 25.535059047475922 23.89176403551615 40 26.60494233008979 25.782081627030344 27.049129002767653 20.56384704011221 41 21.386942555509634 26.25695044520419 26.704502761393094 25.65160423789308 42 19.548205407571604 27.55178394760241 29.381128602021267 23.518882042804723 43 20.383432893764635 26.13563073724812 30.876883194950594 22.604053174036643 44 23.394196691337616 25.287253760128237 28.086216828843725 23.232332719690422 45 20.602356263540845 25.472285882456074 27.411366169490677 26.513991684512405 46 22.601705050656847 25.5692633780416 28.049742645677572 23.779288925623977 47 20.342105922280247 25.261737486067805 31.098232958885923 23.297923632766025 48 21.01852199721982 27.42091520456851 29.254486481070995 22.306076317140676 49 23.850750147149068 25.493027638977594 29.255504001202237 21.400718212671098 50 21.38576849381974 25.783881854954853 28.700955529674015 24.12939412155139 51 20.808521496286833 26.602907289827304 27.868310979198757 24.720260234687107 52 21.444001953638654 27.04224117418692 28.613292256828345 22.900464615346085 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1030.0 1 3817.5 2 6605.0 3 16744.5 4 26884.0 5 16137.5 6 5391.0 7 5741.5 8 6092.0 9 7130.5 10 8169.0 11 9225.5 12 10282.0 13 10777.0 14 10400.0 15 9528.0 16 9103.5 17 8679.0 18 8152.0 19 7625.0 20 7416.5 21 7208.0 22 7063.5 23 6919.0 24 7575.0 25 8231.0 26 9652.5 27 11074.0 28 11349.5 29 11625.0 30 13625.0 31 15625.0 32 17394.0 33 19163.0 34 23294.5 35 27426.0 36 27186.0 37 26946.0 38 30576.0 39 36545.5 40 38885.0 41 41703.0 42 44521.0 43 50507.5 44 56494.0 45 62998.0 46 69502.0 47 77692.5 48 85883.0 49 93641.0 50 101399.0 51 97879.5 52 94360.0 53 89376.5 54 84393.0 55 83643.0 56 82893.0 57 80810.0 58 78727.0 59 79159.0 60 79591.0 61 67837.5 62 56084.0 63 48716.5 64 35532.5 65 29716.0 66 25583.5 67 21451.0 68 17678.0 69 13905.0 70 11824.0 71 9743.0 72 8587.0 73 7431.0 74 6137.0 75 4843.0 76 3710.0 77 2577.0 78 2258.0 79 1939.0 80 1472.0 81 1005.0 82 751.0 83 497.0 84 391.0 85 285.0 86 182.5 87 80.0 88 71.0 89 37.0 90 12.0 91 9.0 92 6.0 93 3.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1277616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.113173342891184 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78422459125642 16.316033483572674 2 9.542163516936093 4.2201503183244 3 3.616140054289789 2.3989299555804617 4 1.8926590271614367 1.674107885864346 5 1.1602420793038422 1.2828317109681182 6 0.8451784631445907 1.121374671671682 7 0.6480850651412501 1.0031852170485172 8 0.5078535100801428 0.8984202160958348 9 0.406184901144401 0.8083833415444133 >10 5.52398769205926 30.543613096399625 >50 1.8181627302765273 27.933562252583798 >100 0.24516946344336712 6.874744389963154 >500 0.005685089007381545 0.8674359749609537 >1k 0.0031978625666521194 1.1086523194473783 >5k 3.5531806296134656E-4 0.46396824566525646 >10k+ 7.106361259226931E-4 2.484606920309355 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20314 1.5899926112384315 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 11308 0.8850859726240122 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5905 0.4621889519229565 No Hit GCCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCCCATGCAGCTCCT 2839 0.22221074250792103 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1813 0.1419049229189365 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1805 0.14127875668432455 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1478 0.1156842118445605 No Hit GGGGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCT 1407 0.11012698651237932 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1349 0.10558728131144256 No Hit CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGCTT 1309 0.10245645013838274 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10590036442874855 0.0 2 0.0 0.0 0.0 0.29281098546042006 0.0 3 0.0 0.0 0.0 0.49279282663961627 0.0 4 0.0 0.0 0.0 0.7008365580894416 0.0 5 0.0 0.0 0.0 1.3631638927502474 0.0 6 0.0 0.0 0.0 2.042397715745576 0.0 7 0.0 0.0 0.0 2.6288023944596812 0.0 8 0.0 0.0 0.0 3.6367734906262914 0.0 9 0.0 0.0 0.0 4.229909456362475 0.0 10 0.0 0.0 0.0 4.90476011571552 0.0 11 0.0 0.0 0.0 5.793759627305858 0.0 12 7.82707793264956E-5 0.0 0.0 6.319817535159234 0.0 13 7.82707793264956E-5 0.0 0.0 6.5705188413419995 0.0 14 7.82707793264956E-5 0.0 0.0 6.816836983882481 0.0 15 7.82707793264956E-5 0.0 0.0 7.006017457514621 0.0 16 7.82707793264956E-5 0.0 0.0 7.287166096855393 0.0 17 7.82707793264956E-5 0.0 0.0 7.580211894653793 0.0 18 7.82707793264956E-5 0.0 0.0 7.905348711976055 0.0 19 7.82707793264956E-5 0.0 0.0 8.124037269414284 0.0 20 7.82707793264956E-5 0.0 0.0 8.444712652314937 0.0 21 7.82707793264956E-5 0.0 0.0 8.744881091032047 0.0 22 7.82707793264956E-5 0.0 0.0 9.074557613555246 0.0 23 7.82707793264956E-5 0.0 0.0 9.372847553568521 0.0 24 7.82707793264956E-5 0.0 0.0 9.602807103229765 0.0 25 7.82707793264956E-5 0.0 0.0 9.860865862669222 0.0 26 7.82707793264956E-5 0.0 0.0 10.083859312970407 0.0 27 7.82707793264956E-5 0.0 0.0 10.398194762745614 0.0 28 7.82707793264956E-5 0.0 0.0 10.631598226697223 0.0 29 1.565415586529912E-4 0.0 0.0 10.953134588170467 0.0 30 1.565415586529912E-4 0.0 0.0 11.677922004733817 0.0 31 2.348123379794868E-4 0.0 0.0 12.008694318167587 0.0 32 2.348123379794868E-4 0.0 0.0 12.272936469173835 0.0 33 3.130831173059824E-4 0.0 0.0 12.554163379293936 0.0 34 3.130831173059824E-4 0.0 0.0 12.883761631037808 0.0 35 3.130831173059824E-4 0.0 0.0 13.211324842519192 7.82707793264956E-5 36 3.130831173059824E-4 0.0 0.0 13.46108689935004 7.82707793264956E-5 37 4.696246759589736E-4 0.0 0.0 13.760942254949844 7.82707793264956E-5 38 4.696246759589736E-4 0.0 0.0 14.121300922969029 7.82707793264956E-5 39 5.478954552854692E-4 0.0 0.0 15.355865925285844 7.82707793264956E-5 40 5.478954552854692E-4 0.0 0.0 15.71356338680793 7.82707793264956E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAG 35 1.0196891E-7 46.000004 1 CGTGCTA 20 6.3117204E-4 46.0 32 ACGTTGT 25 3.4173718E-5 46.0 19 TATTGCG 20 6.3117204E-4 46.0 1 TACGCTT 25 3.4173718E-5 46.0 23 GCGATCA 40 5.6115823E-9 46.0 9 CGTAAGC 20 6.3117204E-4 46.0 26 CGCGTTT 30 1.8615683E-6 46.0 13 ATCGGAC 20 6.3117204E-4 46.0 30 ATCGCGA 25 3.4173718E-5 46.0 19 TCGAAAC 20 6.3117204E-4 46.0 19 TACGTTA 25 3.4173718E-5 46.0 33 CGTTTTT 5495 0.0 43.614197 1 TACGAAT 265 0.0 42.528305 12 TACGGGA 225 0.0 41.91111 4 CGGGTAT 55 4.7293724E-11 41.818184 6 ACGGGTA 55 4.7293724E-11 41.818184 5 CATACGA 840 0.0 41.61905 18 ACATACG 840 0.0 41.61905 17 CGAATAT 275 0.0 40.98182 14 >>END_MODULE