##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933080.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2016397 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5287917012374 33.0 31.0 34.0 31.0 34.0 2 32.87305872801834 34.0 31.0 34.0 31.0 34.0 3 32.904922492941616 34.0 31.0 34.0 31.0 34.0 4 36.35834163609646 37.0 37.0 37.0 35.0 37.0 5 36.33502182357938 37.0 37.0 37.0 35.0 37.0 6 36.503089421378824 37.0 37.0 37.0 35.0 37.0 7 36.58635576228292 37.0 37.0 37.0 35.0 37.0 8 36.4288163491614 37.0 37.0 37.0 35.0 37.0 9 38.03811947746401 39.0 39.0 39.0 35.0 39.0 10 37.8891998946636 39.0 38.0 39.0 35.0 39.0 11 37.66433098244046 39.0 37.0 39.0 35.0 39.0 12 37.5880583039947 39.0 37.0 39.0 35.0 39.0 13 37.539142341513106 39.0 37.0 39.0 35.0 39.0 14 39.02372251099362 41.0 38.0 41.0 35.0 41.0 15 39.066444256760946 41.0 38.0 41.0 35.0 41.0 16 39.06441439855346 41.0 38.0 41.0 35.0 41.0 17 39.05344979188126 41.0 38.0 41.0 35.0 41.0 18 38.95841642295639 41.0 38.0 41.0 35.0 41.0 19 38.84894690876846 41.0 37.0 41.0 35.0 41.0 20 38.72331787837415 40.0 37.0 41.0 35.0 41.0 21 38.68541958751179 40.0 37.0 41.0 35.0 41.0 22 38.639031896992506 40.0 37.0 41.0 35.0 41.0 23 38.61119908430731 40.0 37.0 41.0 35.0 41.0 24 38.57140483744025 40.0 37.0 41.0 35.0 41.0 25 38.522350013415014 40.0 36.0 41.0 35.0 41.0 26 38.45386300416039 40.0 36.0 41.0 35.0 41.0 27 38.39418626391529 40.0 36.0 41.0 35.0 41.0 28 38.39954036829057 40.0 36.0 41.0 35.0 41.0 29 38.37092001227933 40.0 36.0 41.0 35.0 41.0 30 38.29664991566641 40.0 36.0 41.0 35.0 41.0 31 38.21481979987076 40.0 36.0 41.0 34.0 41.0 32 38.084873663271665 40.0 36.0 41.0 34.0 41.0 33 37.87878676669327 40.0 36.0 41.0 34.0 41.0 34 37.72477294897781 40.0 36.0 41.0 34.0 41.0 35 37.57490960361476 40.0 36.0 41.0 33.0 41.0 36 37.46454046499772 40.0 35.0 41.0 33.0 41.0 37 37.37977094788378 40.0 35.0 41.0 33.0 41.0 38 37.32147935153643 40.0 35.0 41.0 33.0 41.0 39 37.222158136517756 40.0 35.0 41.0 33.0 41.0 40 37.19999831382411 40.0 35.0 41.0 33.0 41.0 41 37.17793420640876 40.0 35.0 41.0 33.0 41.0 42 37.14770256055727 40.0 35.0 41.0 33.0 41.0 43 37.08006359858698 40.0 35.0 41.0 33.0 41.0 44 37.01895212103569 40.0 35.0 41.0 32.0 41.0 45 36.9694092978714 40.0 35.0 41.0 32.0 41.0 46 36.89781278190753 40.0 35.0 41.0 32.0 41.0 47 36.803107225412454 39.0 35.0 41.0 32.0 41.0 48 36.72277433461764 39.0 35.0 41.0 32.0 41.0 49 36.63839313389179 39.0 35.0 41.0 31.0 41.0 50 36.52167256745572 39.0 35.0 41.0 31.0 41.0 51 36.411348558840345 39.0 35.0 41.0 31.0 41.0 52 36.18286527901004 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 4.0 14 7.0 15 19.0 16 32.0 17 128.0 18 273.0 19 496.0 20 844.0 21 1445.0 22 2348.0 23 4043.0 24 7513.0 25 13177.0 26 18990.0 27 20640.0 28 20597.0 29 20756.0 30 22787.0 31 27068.0 32 33572.0 33 44587.0 34 92833.0 35 182237.0 36 109398.0 37 138775.0 38 244570.0 39 1001879.0 40 7376.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.30499599037293 22.339450019019072 26.495476833183147 19.86007715742485 2 28.244437975259835 23.961204068444854 26.40675422548238 21.38760373081293 3 24.55384529931358 24.73739050395334 29.39128554545558 21.3174786512775 4 23.840543305708152 28.72534525691121 26.700743950720025 20.73336748666061 5 22.408583230385684 36.29533271473822 23.63373879250961 17.66234526236649 6 87.8297775686038 2.091106066910435 8.170910787905358 1.9082055765804056 7 89.60998255799825 1.344328522607403 6.751844998777523 2.293843920616823 8 82.1670038191884 4.656573085558052 9.852524081319304 3.3238990139342603 9 39.09626923666322 36.57236149428907 13.93287135420257 10.398497914845143 10 24.935169016815635 22.96769931714836 35.94282276754032 16.154308898495685 11 26.103887280133826 22.1232723516252 32.639157864249945 19.13368250399103 12 20.55636861193505 27.86008905984288 33.638762604784674 17.9447797234374 13 16.8692970679881 30.313673349047832 33.87552153668152 18.94150804628255 14 16.564991913794756 27.73625431896596 37.72357328442762 17.975180482811666 15 19.78816671518555 25.258865193709372 36.73056446721553 18.22240362388954 16 20.05835160437156 25.74800498116194 31.780100843236724 22.413542571229772 17 20.345001505159946 25.40159502320228 34.14962430513436 20.103779166503422 18 22.577250412493175 27.903483292228664 31.308765089414436 18.21050120586373 19 22.221169739887532 27.782078628365348 30.63141831692866 19.36533331481846 20 19.84514954148414 28.766309412283398 32.05936132616742 19.329179720065046 21 19.575113432523455 25.749492783415175 32.41445013060424 22.260943653457133 22 16.63982836713207 28.498951347378515 31.675161190975786 23.18605909451363 23 16.200232394711954 27.96284660213242 36.213404403993856 19.62351659916177 24 18.319209957166173 28.727081026206648 32.758132451099655 20.195576565527524 25 17.935704129692713 30.621995569324888 30.469942179045102 20.972358121937297 26 17.048130898825974 28.53788217300462 32.47039149532557 21.94359543284383 27 18.240455624562028 27.266307180580014 33.880480877525606 20.61275631733235 28 17.769962958683237 26.453421622825267 32.628048940759186 23.148566477732313 29 20.44250214615475 27.73273318696665 31.42511122561678 20.399653441261815 30 21.90163940930283 27.201984529832167 29.27563371697141 21.62074234389359 31 23.138151861959724 27.201686969381527 29.607364026032574 20.05279714262618 32 23.257523196076964 27.42084024128185 28.514870831488043 20.80676573115314 33 19.5808662679026 27.378437877064883 30.656363801374432 22.384332053658085 34 20.794317785634476 26.955802850331555 30.846653709562155 21.403225654471814 35 24.299579894237098 27.162855330572306 28.98804154142265 19.549523233767953 36 20.713083782608287 29.496076417491196 30.296166875868195 19.494672924032322 37 21.86399801229619 28.573837394124276 30.480208014592364 19.081956578987175 38 21.129817193737146 28.298197230009762 29.74553126194891 20.826454314304176 39 23.348179946706924 26.790260052955837 30.15110615617857 19.710453844158664 40 19.801705715689916 25.956346890022154 31.67114412489207 22.57080326939586 41 20.977218275964503 27.258074674778825 29.257085782214514 22.507621267042154 42 20.848523381060378 25.932095713294558 31.05301188208473 22.16636902356034 43 21.275175473877418 27.954614096331227 30.346008251351297 20.42420217844006 44 19.381153612111106 30.348438328364903 27.986651438184047 22.283756621339947 45 20.44691595950599 28.532426898076125 29.61599327910129 21.404663863316596 46 21.94508323509706 26.776026744733304 29.804001890500732 21.47488812966891 47 20.706587046102527 26.388702224809897 31.326420342819393 21.578290386268183 48 20.587562865844376 25.12481421069363 30.951990109090623 23.335632814371376 49 20.39608271585407 27.601211467781393 30.202633707548664 21.800072108815876 50 19.87316981725325 27.25787630114506 30.515022587317876 22.353931294283814 51 19.90178521392365 25.785596784760145 31.195692118169188 23.11692588314702 52 20.638644076538498 25.1641913769957 32.24484067373638 21.95232387272943 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2363.0 1 2163.5 2 1964.0 3 17172.5 4 32381.0 5 19956.5 6 7532.0 7 7915.0 8 8298.0 9 9094.5 10 9891.0 11 10553.0 12 11215.0 13 11391.5 14 11268.0 15 10968.0 16 10180.5 17 9393.0 18 9395.0 19 9397.0 20 9812.0 21 10227.0 22 10985.5 23 11744.0 24 12979.0 25 14214.0 26 17105.5 27 19997.0 28 23943.5 29 27890.0 30 31844.0 31 35798.0 32 41897.5 33 47997.0 34 54599.0 35 61201.0 36 67450.5 37 73700.0 38 79011.0 39 89129.0 40 93936.0 41 103588.5 42 113241.0 43 127940.0 44 142639.0 45 148739.5 46 154840.0 47 162951.0 48 171062.0 49 181566.5 50 192071.0 51 191770.5 52 191470.0 53 172082.0 54 152694.0 55 128233.5 56 103773.0 57 87918.0 58 72063.0 59 60313.5 60 48564.0 61 39848.0 62 31132.0 63 25161.5 64 15766.5 65 12342.0 66 9698.0 67 7054.0 68 5426.0 69 3798.0 70 2790.0 71 1782.0 72 1499.0 73 1216.0 74 982.0 75 748.0 76 597.0 77 446.0 78 294.5 79 143.0 80 108.0 81 73.0 82 58.5 83 44.0 84 23.5 85 3.0 86 4.0 87 5.0 88 3.0 89 1.5 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2016397.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.062611455642376 #Duplication Level Percentage of deduplicated Percentage of total 1 72.37936048658669 19.587745102563698 2 11.071132058730837 5.992274905590774 3 4.144372086930749 3.364725945486498 4 2.141998883585463 2.3187233409957257 5 1.3457427338730816 1.8209656363030575 6 0.9049838608211936 1.469473595941866 7 0.695041280987281 1.3166742493093524 8 0.544394811621353 1.178619621230104 9 0.45308416788584344 1.1035476712977859 >10 5.062890786602275 30.944680576170423 >50 1.0271558030666543 19.218011471809458 >100 0.2235662474164827 8.619768699496486 >500 0.0036922305248236155 0.6460418123333865 >1k 0.00239994984113535 1.2191909632953084 >5k 0.0 0.0 >10k+ 1.8461152624118078E-4 1.1995564081760584 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24010 1.1907377366659442 No Hit CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCTT 3117 0.15458265411027688 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT 2736 0.135687565494295 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 2385 0.11828027913154007 No Hit GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT 2185 0.1083615974433606 Illumina Single End Adapter 1 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2128 0.10553477316222945 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.9593408440897306E-5 0.0 0.0 0.1600379290387756 0.0 2 4.9593408440897306E-5 0.0 0.0 0.4938015678460145 0.0 3 4.9593408440897306E-5 0.0 0.0 0.9669226843721748 0.0 4 4.9593408440897306E-5 0.0 0.0 1.2839237511263903 0.0 5 4.9593408440897306E-5 0.0 0.0 2.8194844566818933 0.0 6 4.9593408440897306E-5 0.0 0.0 3.353307905139712 0.0 7 9.918681688179461E-5 0.0 0.0 4.542805806594634 0.0 8 9.918681688179461E-5 0.0 0.0 6.043651126241509 0.0 9 9.918681688179461E-5 0.0 0.0 7.3416098119566735 0.0 10 9.918681688179461E-5 0.0 0.0 8.21524729505152 0.0 11 9.918681688179461E-5 0.0 0.0 9.096918910313793 0.0 12 1.4878022532269192E-4 0.0 0.0 9.72467227435867 0.0 13 1.4878022532269192E-4 0.0 0.0 10.040631879535628 0.0 14 1.4878022532269192E-4 0.0 0.0 10.245651030030297 0.0 15 1.4878022532269192E-4 0.0 0.0 10.7675720604623 0.0 16 1.4878022532269192E-4 0.0 0.0 11.543907276196107 0.0 17 1.4878022532269192E-4 0.0 0.0 12.345287163192566 0.0 18 1.4878022532269192E-4 0.0 0.0 12.873804116947209 0.0 19 1.4878022532269192E-4 0.0 0.0 13.373110553130163 0.0 20 1.4878022532269192E-4 0.0 0.0 13.955287574817856 0.0 21 2.9756045064538385E-4 0.0 0.0 14.62147583040443 0.0 22 3.471538590862811E-4 0.0 0.0 15.310477053873816 0.0 23 3.471538590862811E-4 0.0 0.0 15.837010271290822 0.0 24 3.471538590862811E-4 0.0 0.0 16.256223352841726 0.0 25 3.471538590862811E-4 0.0 0.0 16.67533724757575 0.0 26 3.471538590862811E-4 0.0 0.0 17.114338099094574 0.0 27 3.471538590862811E-4 0.0 0.0 17.559587720076948 0.0 28 3.471538590862811E-4 0.0 0.0 18.044065727136076 0.0 29 3.471538590862811E-4 0.0 0.0 18.60104929733579 0.0 30 3.471538590862811E-4 0.0 0.0 19.09554517289998 0.0 31 3.471538590862811E-4 0.0 0.0 19.528247661546807 0.0 32 3.471538590862811E-4 0.0 0.0 19.98306881035828 0.0 33 3.471538590862811E-4 0.0 0.0 20.467497224008962 0.0 34 3.471538590862811E-4 0.0 0.0 20.997799540467476 0.0 35 3.471538590862811E-4 0.0 0.0 21.479847470513 0.0 36 3.471538590862811E-4 0.0 0.0 21.953464521123568 0.0 37 3.471538590862811E-4 0.0 0.0 22.456788023390235 0.0 38 3.471538590862811E-4 0.0 0.0 23.13750714764999 0.0 39 3.471538590862811E-4 0.0 0.0 23.64693063915489 0.0 40 7.439011266134596E-4 0.0 0.0 24.11137290920389 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTCG 20 6.3125946E-4 46.0 18 ACGTTCG 25 3.418079E-5 46.0 41 CGCCTCG 20 6.3125946E-4 46.0 28 GTCGTGT 20 6.3125946E-4 46.0 27 GCGATCG 30 1.8621067E-6 46.0 8 CGCGTTA 20 6.3125946E-4 46.0 35 CGGACCG 25 3.418079E-5 46.0 5 CGTTTTT 9505 0.0 45.032085 1 CTCGCGG 235 0.0 45.02128 1 TATCCGG 140 0.0 44.357143 1 AATCCGG 130 0.0 44.23077 1 CGACGGT 335 0.0 43.9403 27 ATTGCGG 475 0.0 43.57895 1 AGTACGG 200 0.0 42.550003 1 GCGATGT 240 0.0 42.166668 8 TCACGAC 355 0.0 42.112675 24 CACGACG 350 0.0 42.057144 25 CGGTCTA 345 0.0 41.999996 30 CTTGCGG 455 0.0 41.956043 1 CCAGCGG 355 0.0 41.46479 1 >>END_MODULE