##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933076.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1048525 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54131661143034 33.0 31.0 34.0 31.0 34.0 2 32.89494480341432 34.0 31.0 34.0 31.0 34.0 3 32.931547650270616 34.0 31.0 34.0 31.0 34.0 4 36.37439069168594 37.0 37.0 37.0 35.0 37.0 5 36.35968622588875 37.0 37.0 37.0 35.0 37.0 6 36.50424930259174 37.0 37.0 37.0 35.0 37.0 7 36.56749719844544 37.0 37.0 37.0 35.0 37.0 8 36.41593858038674 37.0 37.0 37.0 35.0 37.0 9 38.044223075272406 39.0 39.0 39.0 35.0 39.0 10 37.966453827996475 39.0 38.0 39.0 35.0 39.0 11 37.68231658758732 39.0 37.0 39.0 35.0 39.0 12 37.596924250733174 39.0 37.0 39.0 35.0 39.0 13 37.52975274790778 39.0 37.0 39.0 35.0 39.0 14 39.003984645096686 41.0 38.0 41.0 35.0 41.0 15 39.062246489115665 41.0 38.0 41.0 35.0 41.0 16 39.05003218807372 41.0 38.0 41.0 35.0 41.0 17 39.02874418826447 41.0 38.0 41.0 35.0 41.0 18 38.9132734078825 41.0 38.0 41.0 35.0 41.0 19 38.75644643666102 40.0 37.0 41.0 35.0 41.0 20 38.6052101761999 40.0 36.0 41.0 35.0 41.0 21 38.56785484370902 40.0 36.0 41.0 35.0 41.0 22 38.52486111442264 40.0 36.0 41.0 35.0 41.0 23 38.48082973701152 40.0 36.0 41.0 35.0 41.0 24 38.40517488853389 40.0 36.0 41.0 35.0 41.0 25 38.34349204835364 40.0 35.0 41.0 35.0 41.0 26 38.25119572733125 40.0 35.0 41.0 35.0 41.0 27 38.17855082139196 40.0 35.0 41.0 35.0 41.0 28 38.14071481366682 40.0 35.0 41.0 35.0 41.0 29 38.087695572351635 40.0 35.0 41.0 34.0 41.0 30 38.002343291767005 40.0 35.0 41.0 34.0 41.0 31 37.904960778236095 40.0 35.0 41.0 34.0 41.0 32 37.75624520159271 40.0 35.0 41.0 34.0 41.0 33 37.51694427886793 40.0 35.0 41.0 33.0 41.0 34 37.35444266946425 40.0 35.0 41.0 33.0 41.0 35 37.2006265945018 40.0 35.0 41.0 33.0 41.0 36 37.12284208769462 40.0 35.0 41.0 33.0 41.0 37 36.99418993347798 40.0 35.0 41.0 33.0 41.0 38 36.94289597291433 40.0 35.0 41.0 33.0 41.0 39 36.85581841157817 40.0 35.0 41.0 32.0 41.0 40 36.78823299396772 40.0 35.0 41.0 32.0 41.0 41 36.74108867218235 40.0 35.0 41.0 32.0 41.0 42 36.684528265897335 39.0 35.0 41.0 32.0 41.0 43 36.60303092439379 39.0 35.0 41.0 32.0 41.0 44 36.504196847953075 39.0 35.0 41.0 31.0 41.0 45 36.429227724660834 39.0 35.0 41.0 31.0 41.0 46 36.343328008392746 39.0 35.0 41.0 31.0 41.0 47 36.236394935743064 39.0 35.0 41.0 31.0 41.0 48 36.16698123554517 39.0 35.0 41.0 31.0 41.0 49 36.08768603514461 38.0 35.0 41.0 31.0 41.0 50 35.97301542643237 38.0 35.0 41.0 31.0 41.0 51 35.852832312057416 38.0 35.0 41.0 30.0 41.0 52 35.61674256693927 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 4.0 14 4.0 15 22.0 16 33.0 17 82.0 18 170.0 19 327.0 20 570.0 21 935.0 22 1474.0 23 2466.0 24 4321.0 25 7325.0 26 10438.0 27 12429.0 28 12391.0 29 12513.0 30 12961.0 31 15171.0 32 18412.0 33 24132.0 34 52096.0 35 98731.0 36 73179.0 37 82927.0 38 131928.0 39 468291.0 40 5189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.679144512529504 20.716434992012587 24.108438043918838 22.495982451539067 2 30.74394983429103 22.740993300112063 24.863975584750005 21.651081280846903 3 27.172265801959895 23.145943110560072 28.65253570491881 21.029255382561217 4 23.317231348799506 26.61319472592451 26.716387305977445 23.353186619298537 5 21.475596671514747 36.52912424596457 24.411721227438544 17.583557855082137 6 85.00236045873966 2.721442025702773 10.350540044348012 1.9256574712095562 7 86.5513936243771 2.191745547316468 8.726544431463246 2.5303163968431845 8 79.25161536444053 4.3358050594883295 12.200853580029088 4.211725996042059 9 37.07722753391669 28.89420853103169 18.037624281729094 15.990939653322526 10 29.66004625545409 23.811926277389666 28.647862473474646 17.8801649936816 11 27.230156648625446 21.075892324932642 32.109963997043465 19.583987029398443 12 22.45659378650962 23.63014711141842 34.26480055315801 19.64845854891395 13 18.073293436017263 28.516153644405236 34.91151856178918 18.49903435778832 14 17.39138313344937 27.44703273646313 36.194749767530574 18.966834362556924 15 20.695834624830116 22.640757254238096 36.854819866002245 19.808588254929543 16 20.059512171860472 24.62506854867552 31.48193891418898 23.83348036527503 17 20.86006532986815 26.389737965236883 31.54383538780668 21.20636131708829 18 23.204120073436492 29.443265539686703 29.18747764717103 18.16513673970578 19 22.9201974201855 26.537183185904006 28.861114422641332 21.681504971269163 20 22.123077656708233 27.38351493765051 31.29443742400038 19.198969981640875 21 19.3800815431201 24.370329748933024 32.06075200877423 24.188836699172647 22 18.393838964259317 28.389022674709715 29.832002098185544 23.38513626284543 23 18.063183996566607 29.107365108128086 32.489640208864834 20.339810686440476 24 22.834648673136073 25.483989413700197 30.744140578431605 20.937221334732122 25 18.064614577620944 28.492310626832936 29.380510717436398 24.062564078109723 26 17.24899263250757 26.836937602823014 32.23823943158246 23.675830333086957 27 20.129324527312175 26.142628931117525 33.22410052216209 20.503946019408218 28 19.53334446007487 27.68880093464629 30.151689277794997 22.626165327483847 29 20.38930879092058 25.615602870699316 31.281752938651913 22.71333539972819 30 25.11203833957226 26.140912233852315 28.321785365155815 20.42526406141961 31 22.701890751293483 28.02794401659474 26.834267184854916 22.43589804725686 32 22.705324145823898 26.584296988626882 27.232445578312394 23.477933287236834 33 19.362246965976013 28.329129014568082 28.634415011563863 23.67420900789204 34 19.162633222860688 28.160129706015592 28.18111156147922 24.4961255096445 35 23.118857442597935 28.959252282968933 26.962351875253333 20.9595383991798 36 19.617653370210533 30.028563935051622 28.412674948141436 21.94110774659641 37 20.594263369972104 32.150973987267825 27.286712286306958 19.968050356453112 38 18.740421067690328 28.78920388164326 27.644452921961804 24.825922128704608 39 21.114518013399774 27.333826089029827 30.898357216089266 20.65329868148113 40 18.154455067833386 26.959109224863496 31.883932190458026 23.002503516845092 41 19.333253856608092 30.471281085334162 27.36300994253833 22.83245511551942 42 19.773300588922535 25.766099997615697 30.163706158651436 24.29689325481033 43 21.360005722324217 26.35588088028421 30.662120597982877 21.621992799408694 44 20.657113564292697 28.356882287022245 27.96261414844663 23.02339000023843 45 21.566200138289503 27.72151355475549 28.314250971602966 22.39803533535204 46 21.865096206575902 27.953267685558288 28.554970077012946 21.626666030852864 47 19.05476741136358 29.453947211559097 30.570086550153786 20.921198826923533 48 20.214014925729 27.2058367707017 29.152380725304596 23.427767578264707 49 19.368446150544813 26.34605755704442 31.580935123149185 22.70456116926158 50 18.890059845974104 27.056197992417918 31.45151522376672 22.60222693784125 51 19.263822989437543 25.407405641257956 30.04039007176748 25.288381297537015 52 19.140506902553586 24.996638134522307 31.409074652488016 24.453780310436088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1767.0 1 1913.0 2 2059.0 3 13777.0 4 25495.0 5 15358.0 6 5221.0 7 5640.5 8 6060.0 9 6834.0 10 7608.0 11 8635.5 12 9663.0 13 9806.5 14 9180.0 15 8410.0 16 7717.0 17 7024.0 18 6501.0 19 5978.0 20 5595.0 21 5212.0 22 5330.0 23 5448.0 24 5804.5 25 6161.0 26 6709.5 27 7258.0 28 8512.5 29 9767.0 30 10830.5 31 11894.0 32 13830.5 33 15767.0 34 17945.0 35 20123.0 36 22431.5 37 24740.0 38 27111.5 39 31707.5 40 33932.0 41 41093.5 42 48255.0 43 57392.0 44 66529.0 45 76990.5 46 87452.0 47 91069.5 48 94687.0 49 95978.5 50 97270.0 51 87910.5 52 78551.0 53 69249.0 54 59947.0 55 56854.5 56 53762.0 57 51714.0 58 49666.0 59 46324.0 60 42982.0 61 38154.5 62 33327.0 63 29508.5 64 21637.0 65 17584.0 66 14288.0 67 10992.0 68 9251.0 69 7510.0 70 6435.5 71 5361.0 72 5189.5 73 5018.0 74 3758.5 75 2499.0 76 1794.0 77 1089.0 78 854.5 79 620.0 80 540.0 81 460.0 82 308.0 83 156.0 84 104.5 85 53.0 86 34.0 87 15.0 88 13.5 89 14.5 90 17.0 91 9.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1048525.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.99110638176742 #Duplication Level Percentage of deduplicated Percentage of total 1 73.42423352721298 22.020739987143788 2 9.492029328687462 5.6935292275104405 3 3.535502443751427 3.181008897106431 4 1.8943937099154988 2.2725985313210706 5 1.1921760208328562 1.787733893329518 6 0.9081316573247107 1.6341523886085692 7 0.7172418134707583 1.5057612870477308 8 0.6363985355965307 1.5269036945821242 9 0.561248384019325 1.5149213992546766 >10 7.3915981801943325 47.55751505038922 >50 0.18704040290132676 3.6249539807513087 >100 0.052664836996470905 2.7933763895173604 >500 0.0038301699633492 0.7534582626293687 >1k 0.0028726274725119003 1.6807546913030689 >5k 3.191808302791E-4 0.5862251810878228 >10k+ 3.191808302791E-4 1.8663671384175837 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19497 1.8594692544288405 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 6124 0.5840585584511576 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3456 0.3296058749195298 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3326 0.3172075057819318 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1880 0.1792994921437257 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCG 1740 0.16594740230323551 No Hit CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCTT 1609 0.15345366109534822 Illumina Single End Adapter 1 (95% over 21bp) TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1527 0.14563315133163254 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1493 0.1423905009417992 No Hit CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 1465 0.13972008297370114 No Hit GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 1062 0.10128513864714718 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15898524117212273 0.0 2 0.0 0.0 0.0 0.4833456522257457 0.0 3 0.0 0.0 0.0 0.9424667985980306 0.0 4 0.0 0.0 0.0 1.2879044371855701 0.0 5 0.0 0.0 0.0 3.0610619680026705 0.0 6 0.0 0.0 0.0 3.5075940010967788 0.0 7 0.0 0.0 0.0 4.502515438353878 0.0 8 0.0 0.0 0.0 5.820938938031997 0.0 9 0.0 0.0 0.0 6.947855320569372 0.0 10 0.0 0.0 0.0 7.836818387735152 0.0 11 0.0 0.0 0.0 8.77823609356 0.0 12 0.0 0.0 0.0 9.441071982070051 0.0 13 0.0 0.0 0.0 9.734054981998522 0.0 14 0.0 0.0 0.0 9.933001120621826 0.0 15 0.0 0.0 0.0 10.465368016976228 0.0 16 9.537207028921581E-5 0.0 0.0 11.161011897665768 0.0 17 9.537207028921581E-5 0.0 0.0 11.940583200209819 0.0 18 9.537207028921581E-5 0.0 0.0 12.370711237214183 0.0 19 9.537207028921581E-5 0.0 0.0 12.812474666793829 0.0 20 9.537207028921581E-5 0.0 0.0 13.338451634438854 0.0 21 9.537207028921581E-5 0.0 0.0 13.88626880618011 0.0 22 9.537207028921581E-5 0.0 0.0 14.431606304093846 0.0 23 9.537207028921581E-5 0.0 0.0 14.844948856727308 0.0 24 9.537207028921581E-5 0.0 0.0 15.191721704298896 0.0 25 9.537207028921581E-5 0.0 0.0 15.536014878042964 0.0 26 9.537207028921581E-5 0.0 0.0 15.903674209007892 0.0 27 1.9074414057843162E-4 0.0 0.0 16.28964497746835 0.0 28 2.861162108676474E-4 0.0 0.0 16.70289215803152 0.0 29 2.861162108676474E-4 0.0 0.0 17.096778808325983 0.0 30 2.861162108676474E-4 0.0 0.0 17.468348394172768 0.0 31 2.861162108676474E-4 0.0 0.0 17.809112801316136 0.0 32 2.861162108676474E-4 0.0 0.0 18.183829665482463 0.0 33 3.8148828115686323E-4 0.0 0.0 18.56388736558499 0.0 34 3.8148828115686323E-4 0.0 0.0 19.01022865453852 0.0 35 3.8148828115686323E-4 0.0 0.0 19.37598054409766 0.0 36 3.8148828115686323E-4 0.0 0.0 19.763286521542167 0.0 37 3.8148828115686323E-4 0.0 0.0 20.187596862258886 0.0 38 3.8148828115686323E-4 0.0 0.0 20.838415869912495 0.0 39 3.8148828115686323E-4 0.0 0.0 21.271977301447272 0.0 40 3.8148828115686323E-4 0.0 0.0 21.670823299396773 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGG 35 1.0194526E-7 46.000004 1 ATGACGG 80 0.0 46.0 1 TACTCGC 25 3.4169487E-5 46.0 44 AATCGGC 20 6.3111994E-4 46.0 46 ACGTAGG 130 0.0 44.23077 1 CGTTTTT 6150 0.0 44.09268 1 CCAATCG 95 0.0 43.578945 23 TAACCGG 95 0.0 43.578945 1 CTTGCGG 290 0.0 42.827587 1 ATTGCGG 275 0.0 42.65455 1 TCACGAC 270 0.0 42.592594 24 CACGACG 260 0.0 42.46154 25 CGCACTT 2295 0.0 42.29194 34 ATAGCGG 120 0.0 42.166668 1 GCACTTA 2310 0.0 42.017315 35 TCGACGG 115 0.0 42.0 1 ACCCGCA 2370 0.0 41.92405 31 TCAACGC 2530 0.0 41.909092 15 CTCGCGG 110 0.0 41.81818 1 CCCGCAC 2380 0.0 41.747894 32 >>END_MODULE