##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933074.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 724642 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38561248174961 33.0 31.0 34.0 31.0 34.0 2 32.74268121361997 34.0 31.0 34.0 31.0 34.0 3 32.7304186067051 34.0 31.0 34.0 31.0 34.0 4 36.23027646755225 37.0 37.0 37.0 35.0 37.0 5 36.03261886559156 37.0 35.0 37.0 35.0 37.0 6 36.14424502029968 37.0 35.0 37.0 35.0 37.0 7 36.475629345249104 37.0 37.0 37.0 35.0 37.0 8 36.44225700414825 37.0 37.0 37.0 35.0 37.0 9 38.251607000422275 39.0 39.0 39.0 37.0 39.0 10 37.929676999125086 39.0 38.0 39.0 35.0 39.0 11 37.56591806712832 39.0 37.0 39.0 35.0 39.0 12 37.140278923937615 39.0 35.0 39.0 35.0 39.0 13 37.0483673317307 39.0 35.0 39.0 34.0 39.0 14 37.34510558317072 40.0 36.0 41.0 27.0 41.0 15 37.821848581782454 40.0 36.0 41.0 32.0 41.0 16 38.19649840886948 40.0 36.0 41.0 33.0 41.0 17 38.310764487843656 40.0 36.0 41.0 34.0 41.0 18 38.247170326864854 40.0 36.0 41.0 34.0 41.0 19 38.15446247940362 40.0 36.0 41.0 34.0 41.0 20 37.860700870222814 40.0 35.0 41.0 33.0 41.0 21 37.84791248644158 40.0 35.0 41.0 33.0 41.0 22 37.84521736250452 40.0 35.0 41.0 34.0 41.0 23 37.875452982300224 40.0 35.0 41.0 34.0 41.0 24 37.803220072808365 40.0 35.0 41.0 34.0 41.0 25 37.60202693191948 39.0 35.0 41.0 34.0 41.0 26 37.53166253129131 39.0 35.0 41.0 34.0 41.0 27 37.42603934080553 39.0 35.0 41.0 34.0 41.0 28 37.382586159786484 39.0 35.0 41.0 34.0 41.0 29 37.29467930371135 39.0 35.0 41.0 33.0 41.0 30 37.23868475743885 39.0 35.0 41.0 33.0 41.0 31 37.04512849103419 39.0 35.0 41.0 33.0 41.0 32 36.90771719000555 39.0 35.0 41.0 33.0 41.0 33 36.77360820929507 39.0 35.0 41.0 32.0 41.0 34 36.51469415242285 39.0 35.0 41.0 31.0 41.0 35 36.44710215527115 39.0 35.0 41.0 31.0 41.0 36 36.3744787081069 39.0 35.0 41.0 31.0 41.0 37 36.222353934770545 39.0 35.0 41.0 31.0 41.0 38 36.22046472603023 39.0 35.0 41.0 31.0 41.0 39 36.170324104868335 39.0 35.0 41.0 31.0 41.0 40 36.069155527833054 38.0 35.0 41.0 31.0 41.0 41 35.86803000654116 38.0 35.0 41.0 30.0 41.0 42 35.93777341087047 38.0 35.0 41.0 30.0 41.0 43 35.918877183491986 38.0 35.0 41.0 30.0 41.0 44 35.91179782568496 38.0 35.0 41.0 30.0 41.0 45 35.879287979443646 38.0 35.0 41.0 30.0 41.0 46 35.848612142271634 38.0 35.0 41.0 30.0 41.0 47 35.749358993820394 38.0 35.0 41.0 30.0 41.0 48 35.60277212747812 37.0 35.0 41.0 29.0 41.0 49 35.58688980213678 37.0 35.0 40.0 29.0 41.0 50 35.4746592110311 37.0 35.0 40.0 29.0 41.0 51 35.40544020357639 37.0 35.0 40.0 29.0 41.0 52 35.14807725745955 36.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 3.0 14 5.0 15 11.0 16 36.0 17 98.0 18 176.0 19 345.0 20 645.0 21 1022.0 22 1569.0 23 2447.0 24 4115.0 25 6901.0 26 8480.0 27 9039.0 28 9240.0 29 10047.0 30 11401.0 31 13736.0 32 17420.0 33 24825.0 34 64869.0 35 72674.0 36 54124.0 37 56060.0 38 79839.0 39 273761.0 40 1752.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.44243088311194 21.650276964349295 25.195475834964025 14.711816317574748 2 41.724327323009156 21.54939956557859 24.246317491947746 12.479955619464508 3 33.52069021668631 21.84306181535158 31.738568838129726 12.897679129832387 4 30.18331810742408 24.77678633035347 31.425310705148195 13.614584857074252 5 23.414596449005167 29.024953011280054 33.40187292483737 14.158577614877416 6 24.856273856607814 35.23257001388272 31.001929228501794 8.90922690100767 7 84.23690594804056 1.424427510412038 11.993508518689229 2.345158022858184 8 82.18265019140486 1.5490407677170244 12.46449971158172 3.8038093292963975 9 77.22889371579346 3.4588113854841422 14.411392108103035 4.900902790619368 10 48.49180698883035 23.256035394029052 18.19146557886515 10.060692038275452 11 30.69460506015384 23.69514877691329 30.481258331700346 15.128987831232527 12 30.448690525804466 16.8894433389177 35.779184756058854 16.88268137921898 13 31.038637009723423 16.85259755851855 38.65412162143513 13.454643810322892 14 16.229393272816097 20.21784550164081 45.82110890619092 17.731652319352175 15 12.656042569986283 28.567209739429956 43.190568584211235 15.586179106372525 16 30.9675674332981 24.86496780479188 30.193254048205876 13.974210713704146 17 26.485492146466804 22.37256465951463 28.34779104716536 22.794152146853204 18 22.986385001145393 23.104650296284234 36.85199036213744 17.05697434043293 19 22.593225344376947 25.536609801805582 29.633253385809823 22.23691146800765 20 14.714576301125245 41.36152748529619 27.673113068246113 16.250783145332452 21 21.004578812710275 26.486734139064534 38.7431310909387 13.765555957286493 22 15.379180340085172 22.97562106529845 42.57095227712443 19.074246317491948 23 18.43048015433828 24.619881265507658 38.808956698618076 18.140681881535986 24 20.738102400909693 31.68571515313769 29.766008594588776 17.810173851363846 25 23.873443714275464 26.108754391823823 31.658391315987757 18.359410577912953 26 15.268229001355152 30.558813869469336 27.190391945264007 26.982565183911504 27 21.368758642198493 25.153938082529027 34.902889978775725 18.574413296496754 28 14.96918478365869 29.837216170191628 27.629919325680817 27.563679720468865 29 20.672966789117936 31.68971712928591 26.047620756180294 21.58969532541586 30 26.57850359211859 24.015168869593538 27.033900877950767 22.372426660337105 31 21.191705697434042 26.92143154826797 32.707875061064634 19.17898769323335 32 26.2526875339823 24.533217782022017 24.986821078546374 24.227273605449312 33 25.942603382083846 24.244247504284875 30.189390071235177 19.62375904239611 34 16.111817973564875 26.61424537909754 36.491122512909826 20.78281413442776 35 19.50894372669539 31.812950394815648 27.228065720728306 21.45004015776066 36 25.966615238973173 26.575743608568093 25.693376867473873 21.76426428498486 37 18.064782333897288 33.80317453307978 26.883757772803673 21.248285360219253 38 22.187783760808784 26.08391453986934 31.552407947648632 20.17589375167324 39 19.035606547784976 28.930147576320447 27.255941554588336 24.778304321306244 40 26.11179037372937 26.14201219360733 30.49050427659451 17.25569315606879 41 18.65900679231952 26.110962378664222 26.64943516936639 28.58059565964987 42 18.261983158580374 28.03135893310076 33.527176178029976 20.179481730288888 43 18.531495552286508 28.645593272264097 32.3740550506319 20.448856124817496 44 24.522315846997554 25.690340885568325 27.356818953359035 22.430524314075086 45 18.71061848471383 24.644307119929564 25.812608156855386 30.832466238501215 46 21.681326779292394 24.489610041924152 29.223671826915908 24.605391351867542 47 16.32502670284085 26.090538500390537 33.464662550611195 24.11977224615741 48 16.858393523974595 33.16962030906296 28.860043994137797 21.111942172824648 49 24.05022066068486 26.729612691508358 29.273627529179926 19.946539118626852 50 19.250057269658676 26.679518990066818 28.610127483640195 25.46029625663431 51 19.33271877699609 27.672423072358487 26.515575967167237 26.479282183478187 52 18.88684343441313 28.84693407227293 28.606539505024546 23.65968298828939 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 577.0 1 1177.0 2 1777.0 3 12147.5 4 22518.0 5 12586.5 6 2655.0 7 3068.5 8 3482.0 9 4676.5 10 5871.0 11 7110.5 12 8350.0 13 9029.0 14 9218.5 15 8729.0 16 8064.0 17 7399.0 18 6685.0 19 5971.0 20 5599.5 21 5228.0 22 4980.5 23 4733.0 24 4970.0 25 5207.0 26 5463.0 27 5719.0 28 6434.5 29 7150.0 30 7889.5 31 8629.0 32 9264.0 33 9899.0 34 10982.5 35 12066.0 36 13048.5 37 14031.0 38 15024.5 39 17267.5 40 18517.0 41 20971.5 42 23426.0 43 27741.5 44 32057.0 45 38511.5 46 44966.0 47 53750.5 48 62535.0 49 72117.5 50 81700.0 51 76569.5 52 71439.0 53 63158.0 54 54877.0 55 49750.5 56 44624.0 57 40465.0 58 36306.0 59 40618.5 60 44931.0 61 29787.0 62 14643.0 63 12342.0 64 8114.5 65 6188.0 66 5266.0 67 4344.0 68 3726.0 69 3108.0 70 2491.0 71 1874.0 72 1577.5 73 1281.0 74 1001.0 75 721.0 76 713.5 77 706.0 78 529.0 79 352.0 80 254.0 81 156.0 82 114.5 83 73.0 84 54.0 85 35.0 86 23.0 87 11.0 88 10.0 89 6.0 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 724642.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.980467799854395 #Duplication Level Percentage of deduplicated Percentage of total 1 70.50048598139014 23.95639493764714 2 12.073372229018288 8.205176725276244 3 4.8964540055314085 4.991513930052843 4 2.6193734779869966 3.5603014449811905 5 1.5812721594620838 2.6866183848703784 6 1.0944998037423272 2.2314969202807866 7 0.8181081484996992 1.9459788317824773 8 0.6981528499991473 1.8978848351018083 9 0.5856730169206176 1.7911298783443164 >10 4.976984749993651 33.019772437268394 >50 0.10714398159047331 2.2272575374042987 >100 0.03503567432276476 2.2841537153860165 >500 0.00814783123785227 2.085916859602212 >1k 0.004073915618926135 2.53374942137638 >5k 4.0739156189261344E-4 1.0963937833852881 >10k+ 8.147831237852269E-4 5.486260357240195 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19996 2.7594315537879397 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 19635 2.7096138507014498 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 7920 1.0929534859972234 No Hit GGGGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 3542 0.4887930867932027 RNA PCR Primer, Index 38 (95% over 21bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCGACTATGTCG 2136 0.29476624319319056 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 2058 0.2840023073462482 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCG 2020 0.2787583386003019 No Hit CTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCTT 1756 0.24232655573372783 RNA PCR Primer, Index 38 (96% over 25bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1544 0.2130707300984486 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCCGACTATGT 1512 0.20865475641765174 No Hit GCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCT 1418 0.19568283373031098 RNA PCR Primer, Index 27 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCT 1280 0.1766389472318745 RNA PCR Primer, Index 38 (95% over 24bp) CGTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 1037 0.1431051470933233 RNA PCR Primer, Index 27 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 975 0.1345491980867794 RNA PCR Primer, Index 38 (95% over 23bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCC 939 0.12958122769588293 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCG 913 0.1259932490802355 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCT 900 0.12419925977241175 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTC 880 0.12143927622191371 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 863 0.1190932902039904 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTT 852 0.11757529925121646 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 833 0.11495331487824333 No Hit GGGGTTGGGGATTTAGCTCAGTGGCTGTCTCTTATACACATCTGACGCCGAC 799 0.11026134284239665 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGCTGTCTCTTATACACATCTGACGCC 760 0.10487937491892547 No Hit GGGGTTGGGGACTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCC 753 0.10391338067625117 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTGTCTCTTATACACATCTGA 734 0.10129139630327803 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25157250062789627 0.0 2 0.0 0.0 0.0 0.7504395273804169 0.0 3 0.0 0.0 0.0 1.2243287030009302 0.0 4 0.0 0.0 0.0 1.7956452979540243 0.0 5 0.0 0.0 0.0 3.795529378644903 0.0 6 0.0 0.0 0.0 5.245072739366473 0.0 7 0.0 0.0 0.0 6.320638328995559 0.0 8 0.0 0.0 0.0 8.28312463257719 0.0 9 0.0 0.0 0.0 9.367936167100444 0.0 10 0.0 0.0 0.0 10.88661711576199 0.0 11 0.0 0.0 0.0 13.168157517781195 0.0 12 0.0 0.0 0.0 14.555187251083984 0.0 13 0.0 0.0 0.0 15.233591207796401 0.0 14 0.0 0.0 0.0 16.033434440730733 0.0 15 0.0 0.0 0.0 16.55700332026021 0.0 16 0.0 0.0 0.0 17.199803489171206 0.0 17 0.0 0.0 0.0 17.983224819980073 0.0 18 0.0 0.0 0.0 18.989652821669182 0.0 19 0.0 0.0 0.0 19.53212758851957 0.0 20 0.0 0.0 0.0 20.304646984303975 0.0 21 0.0 0.0 0.0 20.94165118775892 0.0 22 0.0 0.0 0.0 21.66173089608386 0.0 23 0.0 0.0 0.0 22.319020978634967 0.0 24 0.0 0.0 0.0 22.795670137805978 0.0 25 0.0 0.0 0.0 23.32972695482735 0.0 26 0.0 0.0 0.0 23.78981621269537 0.0 27 0.0 0.0 0.0 24.598629392168824 0.0 28 0.0 0.0 0.0 25.141932154084362 0.0 29 0.0 0.0 0.0 25.853731911757805 0.0 30 0.0 0.0 0.0 27.461836327455487 0.0 31 0.0 0.0 0.0 28.081314635364773 0.0 32 0.0 0.0 0.0 28.589703605366513 0.0 33 0.0 0.0 0.0 29.1343863590573 0.0 34 0.0 0.0 0.0 29.757866643114806 0.0 35 0.0 0.0 0.0 30.3308392281982 0.0 36 0.0 0.0 0.0 30.750908724584 0.0 37 0.0 0.0 0.0 31.297109469227564 0.0 38 0.0 0.0 0.0 31.922107744237845 0.0 39 0.0 0.0 0.0 34.156728425898585 0.0 40 0.0 0.0 0.0 34.73577297479307 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 30 1.8604442E-6 46.0 1 CGGGTAG 20 6.3099037E-4 46.0 6 CGTATGG 40 5.6061253E-9 46.0 2 CATGCGA 30 1.8604442E-6 46.0 11 ACTTGCG 30 1.8604442E-6 46.0 1 ACCGCGG 25 3.415897E-5 46.0 2 GACGTAG 30 1.8604442E-6 46.0 1 CGATTGA 20 6.3099037E-4 46.0 10 CGCTCGA 20 6.3099037E-4 46.0 44 TACGAAT 45 3.092282E-10 46.0 12 GTCCGGA 25 3.415897E-5 46.0 12 CGTAAGG 115 0.0 46.0 2 TATAGCG 40 5.6061253E-9 46.0 1 ATGCGAA 30 1.8604442E-6 46.0 12 TAATGCG 25 3.415897E-5 46.0 1 TACGTAT 20 6.3099037E-4 46.0 15 CTTACGG 20 6.3099037E-4 46.0 2 CGTTTTT 4715 0.0 45.26829 1 TACGGGA 125 0.0 44.159996 4 AATGCGG 85 0.0 43.294117 2 >>END_MODULE