##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933073.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1573357 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31951299037663 33.0 31.0 34.0 31.0 34.0 2 32.66665162452006 34.0 31.0 34.0 31.0 34.0 3 32.65147388672755 34.0 31.0 34.0 31.0 34.0 4 36.174535722026214 37.0 35.0 37.0 35.0 37.0 5 36.00291287991219 37.0 35.0 37.0 35.0 37.0 6 36.11520144506301 37.0 35.0 37.0 35.0 37.0 7 36.448006396513954 37.0 37.0 37.0 35.0 37.0 8 36.3855711068753 37.0 37.0 37.0 35.0 37.0 9 38.20581978533797 39.0 39.0 39.0 37.0 39.0 10 37.898424197432625 39.0 38.0 39.0 35.0 39.0 11 37.57193504080765 39.0 37.0 39.0 35.0 39.0 12 37.25786391772497 39.0 35.0 39.0 35.0 39.0 13 37.19025497709674 39.0 37.0 39.0 34.0 39.0 14 37.762227517340314 40.0 37.0 41.0 31.0 41.0 15 38.14196841530562 40.0 37.0 41.0 33.0 41.0 16 38.44230012641759 40.0 37.0 41.0 33.0 41.0 17 38.53680823868963 40.0 37.0 41.0 35.0 41.0 18 38.480668405199836 40.0 37.0 41.0 35.0 41.0 19 38.40328482346982 40.0 37.0 41.0 35.0 41.0 20 38.152833082383715 40.0 35.0 41.0 33.0 41.0 21 38.11595334053238 40.0 35.0 41.0 34.0 41.0 22 38.08974949741222 40.0 35.0 41.0 34.0 41.0 23 38.09871758284992 40.0 35.0 41.0 34.0 41.0 24 38.039957873515036 40.0 35.0 41.0 34.0 41.0 25 37.84032422393646 40.0 35.0 41.0 34.0 41.0 26 37.76325271378333 40.0 35.0 41.0 34.0 41.0 27 37.65860894889081 39.0 35.0 41.0 34.0 41.0 28 37.60816140265687 39.0 35.0 41.0 34.0 41.0 29 37.54903559713403 39.0 35.0 41.0 34.0 41.0 30 37.52040763793595 40.0 35.0 41.0 34.0 41.0 31 37.384540190179344 40.0 35.0 41.0 33.0 41.0 32 37.30134165354716 40.0 35.0 41.0 33.0 41.0 33 37.21189024487132 39.0 35.0 41.0 33.0 41.0 34 37.0422205513434 39.0 35.0 41.0 33.0 41.0 35 36.97959585777417 39.0 35.0 41.0 33.0 41.0 36 36.89275924027414 39.0 35.0 41.0 33.0 41.0 37 36.79851870872282 39.0 35.0 41.0 32.0 41.0 38 36.777313731085826 39.0 35.0 41.0 32.0 41.0 39 36.761767990354386 39.0 35.0 41.0 32.0 41.0 40 36.684821054598544 39.0 35.0 41.0 32.0 41.0 41 36.51194992617696 39.0 35.0 41.0 31.0 41.0 42 36.56322627350309 39.0 35.0 41.0 32.0 41.0 43 36.54842734357174 39.0 35.0 41.0 32.0 41.0 44 36.537062472153494 39.0 35.0 41.0 32.0 41.0 45 36.49637494859717 39.0 35.0 41.0 32.0 41.0 46 36.46227906317511 38.0 35.0 41.0 32.0 41.0 47 36.37226897646243 38.0 35.0 41.0 32.0 41.0 48 36.25502412993364 38.0 35.0 41.0 31.0 41.0 49 36.24398467734913 38.0 35.0 41.0 31.0 41.0 50 36.13343316234014 38.0 35.0 41.0 31.0 41.0 51 36.08590230952034 38.0 35.0 41.0 31.0 41.0 52 35.85032322607012 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 2.0 14 11.0 15 42.0 16 73.0 17 170.0 18 325.0 19 608.0 20 984.0 21 1595.0 22 2508.0 23 4022.0 24 6322.0 25 10366.0 26 13321.0 27 14664.0 28 15968.0 29 18270.0 30 22113.0 31 27527.0 32 35403.0 33 49438.0 34 119991.0 35 153698.0 36 138969.0 37 132238.0 38 169031.0 39 629003.0 40 6690.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.233099036010266 23.053954061284248 25.53228542536754 15.180661477337948 2 39.0269341287451 22.5478387931029 25.395825613640135 13.029401464511869 3 31.46304367031767 22.746268011646436 32.65959346797961 13.131094850056279 4 28.474338627533356 26.15903447215095 31.56988528350527 13.796741616810426 5 22.524957781355408 30.0347600703464 32.72505858492383 14.715223563374364 6 23.620386218766626 36.21352305929296 29.536780273008606 10.629310448931806 7 82.29619851057325 1.1900668443334856 12.345577005091661 4.168157640001602 8 79.10728461499838 1.3998730103848014 13.275245224065484 6.217597150551337 9 73.65321411478767 3.1549101697834634 16.575386260079565 6.616489455349295 10 44.013405730549394 25.67465616512972 19.351806360539918 10.960131743780972 11 26.44657251977777 21.939394555717488 34.420541555413045 17.193491369091692 12 26.651166899819938 16.845572873797874 36.60224602553648 19.901014200845708 13 26.415683153918657 18.26953450488351 40.404752386139954 14.91002995505788 14 13.936570021933992 23.01289535687069 44.232173626201806 18.81836099499351 15 10.525201845480714 30.51176560691566 42.92426957136873 16.038762976234892 16 24.551198488327824 28.157881523392337 33.50027997460208 13.790640013677761 17 20.937460474641163 27.70877810948183 28.774715465085166 22.579045950791844 18 18.169874987049983 27.454989554182553 36.6993632087314 17.67577225003607 19 18.070978169608043 31.114870941559992 28.48088513922778 22.333265749604188 20 12.119690572451134 42.76804310782613 25.931368405263395 19.180897914459337 21 17.31526919828113 32.18500314931703 34.975406090289745 15.524321562112094 22 13.388124882019783 27.6905368584498 37.941992821718145 20.97934543781227 23 15.335871007025107 29.216191875079843 35.28436330724686 20.163573810648185 24 18.183540035732513 32.522498072592555 30.482973667133393 18.81098822454154 25 20.942672260650316 28.163601776329212 30.905954592632185 19.987771370388284 26 13.852100953566165 33.04755373383155 27.61788964615151 25.482455666450782 27 20.776212900187307 28.185020945659506 32.09767395448077 18.941092199672422 28 15.020875745301288 31.80848338933885 26.87965922546504 26.290981639894824 29 18.552432791794867 31.23474201977047 26.155284528558997 24.057540659875666 30 22.854444350519305 25.072821997804695 27.71824830601065 24.35448534566535 31 17.802380515038863 26.879977017294866 33.46646692390856 21.851175543757712 32 21.47605406783076 24.719628158135755 29.10242240000203 24.701895374031448 33 19.986182411239152 26.29937134420224 34.47691782602423 19.23752841853438 34 12.320090100339593 25.967342440399733 39.05292950042489 22.659637958835788 35 13.868181220155376 30.622357163695206 31.073367328584677 24.436094287564742 36 18.757535638764754 26.945696367702944 29.778810530604304 24.517957462927995 37 12.271277275278274 30.44356748023494 33.126429665994436 24.15872557849236 38 16.68731254254438 26.04132437838329 34.4226389814899 22.84872409758243 39 14.078877203330203 29.46203563463346 30.558163214070294 25.900923947966035 40 21.815328625353306 25.123223782015142 31.870961263082698 21.190486329548857 41 15.396442129789998 25.74361699220202 28.765181710190372 30.094759167817603 42 15.190068115500804 28.304192881844365 34.97902891714976 21.52671008550507 43 15.508686204084643 28.787554255010146 35.723678732798724 19.980080808106486 44 21.433342845902107 27.096901720334294 29.245047373228072 22.22470806053553 45 16.614347538416265 26.28329107761303 27.53195873536648 29.570402648604226 46 20.183658254293206 25.13002452717343 29.49756476120804 25.188752457325325 47 15.422564618201717 25.078033783813847 33.09344287405846 26.405958723925977 48 14.717003197621391 31.11645990070912 30.42449997044536 23.742036931224128 49 21.586645624610306 25.28726792457147 30.79263002611613 22.333456424702085 50 16.668435707852698 26.289392680745692 31.323787290487793 25.718384320913817 51 15.909930168423314 26.060519004904798 29.085897224851067 28.943653601820817 52 15.532647708053544 27.30696211984947 32.43999931356964 24.72039085852734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1092.0 1 1839.0 2 2586.0 3 27335.0 4 52084.0 5 28187.5 6 4291.0 7 5501.5 8 6712.0 9 11149.0 10 15586.0 11 19904.0 12 24222.0 13 25390.0 14 25109.0 15 23660.0 16 20742.5 17 17825.0 18 15781.5 19 13738.0 20 12713.0 21 11688.0 22 10943.5 23 10199.0 24 10306.0 25 10413.0 26 11024.0 27 11635.0 28 12472.0 29 13309.0 30 14634.5 31 15960.0 32 17933.5 33 19907.0 34 22236.5 35 24566.0 36 26423.0 37 28280.0 38 32731.5 39 42193.5 40 47204.0 41 60197.5 42 73191.0 43 99702.0 44 126213.0 45 151665.5 46 177118.0 47 180818.5 48 184519.0 49 181242.0 50 177965.0 51 139846.5 52 101728.0 53 88632.5 54 75537.0 55 67713.0 56 59889.0 57 56440.0 58 52991.0 59 61694.0 60 70397.0 61 46315.5 62 22234.0 63 17009.5 64 9828.0 65 7871.0 66 6484.0 67 5097.0 68 4267.5 69 3438.0 70 2739.5 71 2041.0 72 1629.0 73 1217.0 74 952.5 75 688.0 76 512.5 77 337.0 78 272.5 79 208.0 80 164.0 81 120.0 82 89.5 83 59.0 84 30.5 85 2.0 86 7.0 87 12.0 88 6.5 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1573357.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.711987509538275 #Duplication Level Percentage of deduplicated Percentage of total 1 65.39133023093075 16.159497358988535 2 12.804116107946223 6.328303146604898 3 6.000420972244623 4.448469843542418 4 3.605179962029137 3.5636464876520684 5 2.311643819482163 2.8562656596772285 6 1.589859560376503 2.357315375876649 7 1.1865945017870896 2.0526175954934547 8 0.8559379065337183 1.6921541484161269 9 0.6351822361969837 1.4126953938462405 >10 4.654352549182114 23.66012812926521 >50 0.6473824549190234 11.17047871041808 >100 0.3023055388892899 11.555987301203947 >500 0.0069465951807059995 1.2813776849936225 >1k 0.0069465951807059995 3.7363661017177834 >5k 0.0010291252119564445 1.4119696153785037 >10k+ 7.718439089673332E-4 6.312727446925264 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49011 3.1150590743232462 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 32677 2.0768967246467267 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 17601 1.1186907993545012 No Hit GGGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT 5825 0.37022748174762626 No Hit CGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 5580 0.3546556820861381 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC 5413 0.34404143496994005 No Hit CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCTT 5390 0.3425795925527391 Illumina Single End Adapter 1 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT 4929 0.3132791858427553 No Hit CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 4901 0.3114995515957281 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 4205 0.26726292888390873 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT 4194 0.2665637868582909 No Hit GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 4069 0.25861899111263364 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG 3133 0.19912836056915245 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCTTTACCTTCG 2666 0.1694466036633771 No Hit CGTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG 2458 0.1562264635426035 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2380 0.15126891099731338 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCCTTTACCTT 2157 0.13709539538706092 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT 2138 0.13588778643372101 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTGTCTCTTATACACATCTGA 1992 0.12660826500279337 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 1763 0.11205339919674938 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.355836596525772E-5 0.0 0.0 0.3505879466643616 0.0 2 6.355836596525772E-5 0.0 0.0 1.1073774102126854 0.0 3 6.355836596525772E-5 0.0 0.0 1.9127890237244312 0.0 4 6.355836596525772E-5 0.0 0.0 2.784809804767767 0.0 5 6.355836596525772E-5 0.0 0.0 5.497862214360759 0.0 6 6.355836596525772E-5 0.0 0.0 8.594807154383906 0.0 7 6.355836596525772E-5 0.0 0.0 11.196886657001558 0.0 8 6.355836596525772E-5 0.0 0.0 15.374832285361808 0.0 9 6.355836596525772E-5 0.0 0.0 17.625815374387376 0.0 10 6.355836596525772E-5 0.0 0.0 19.750571548605944 0.0 11 6.355836596525772E-5 0.0 0.0 22.484661777333436 0.0 12 6.355836596525772E-5 0.0 0.0 24.113217788461235 0.0 13 1.2711673193051544E-4 0.0 0.0 24.869498785081834 0.0 14 1.2711673193051544E-4 0.0 0.0 25.563492583056483 0.0 15 1.2711673193051544E-4 0.0 0.0 26.06128170529638 0.0 16 1.9067509789577318E-4 0.0 0.0 26.755275503271033 0.0 17 1.9067509789577318E-4 0.0 0.0 27.620749772619945 0.0 18 1.9067509789577318E-4 0.0 0.0 28.59611645672279 0.0 19 1.9067509789577318E-4 0.0 0.0 29.191531229085324 0.0 20 1.9067509789577318E-4 0.0 0.0 29.974633856143267 0.0 21 1.9067509789577318E-4 0.0 0.0 30.65960236615085 0.0 22 2.542334638610309E-4 0.0 0.0 31.431518720798902 0.0 23 2.542334638610309E-4 0.0 0.0 32.15227059084493 0.0 24 2.542334638610309E-4 0.0 0.0 32.66232647771612 0.0 25 2.542334638610309E-4 0.0 0.0 33.182678819873686 0.0 26 2.542334638610309E-4 0.0 0.0 33.64258715599829 0.0 27 2.542334638610309E-4 0.0 0.0 34.25147630194546 0.0 28 2.542334638610309E-4 0.0 0.0 34.737570684847746 0.0 29 2.542334638610309E-4 0.0 0.0 35.369023050712585 0.0 30 3.177918298262886E-4 0.0 0.0 37.02382866698404 0.0 31 3.177918298262886E-4 0.0 0.0 37.709941227578994 0.0 32 3.177918298262886E-4 0.0 0.0 38.24643739469173 0.0 33 3.177918298262886E-4 0.0 0.0 38.792340199967335 0.0 34 3.177918298262886E-4 0.0 0.0 39.358391007253914 0.0 35 3.177918298262886E-4 0.0 0.0 39.94325509086622 0.0 36 3.177918298262886E-4 0.0 0.0 40.38110867400088 0.0 37 3.177918298262886E-4 0.0 0.0 40.9094058119041 0.0 38 3.177918298262886E-4 0.0 0.0 41.510286603739644 0.0 39 3.177918298262886E-4 0.0 0.0 43.62862338299572 0.0 40 3.177918298262886E-4 0.0 0.0 44.21450440046347 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTACGG 110 0.0 46.000004 2 ACGCGAG 80 0.0 46.0 1 CTATGCG 30 1.8618448E-6 46.0 1 CAGCGCG 40 5.6134013E-9 46.0 1 GATACCG 20 6.312169E-4 46.0 1 AGTCCCC 20 6.312169E-4 46.0 46 ACAGTCG 20 6.312169E-4 46.0 43 CGTATCG 20 6.312169E-4 46.0 26 ACGCATG 20 6.312169E-4 46.0 1 CCGATCT 30 1.8618448E-6 46.0 12 CGTGCGG 155 0.0 46.0 2 ACGCACG 25 3.417734E-5 46.0 1 CGGCCGA 20 6.312169E-4 46.0 28 GACGTTA 20 6.312169E-4 46.0 9 GGCCGCG 20 6.312169E-4 46.0 1 CGACAGG 90 0.0 46.0 2 TACGGCA 25 3.417734E-5 46.0 39 TAACGCA 20 6.312169E-4 46.0 37 TCGATAT 20 6.312169E-4 46.0 23 TCGATAG 50 1.6370905E-11 46.0 1 >>END_MODULE