##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933072.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1529512 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43774354173096 33.0 31.0 34.0 31.0 34.0 2 32.8308944290728 34.0 31.0 34.0 31.0 34.0 3 32.8867828431552 34.0 31.0 34.0 31.0 34.0 4 36.34013528497979 37.0 37.0 37.0 35.0 37.0 5 36.17141741941221 37.0 37.0 37.0 35.0 37.0 6 36.262206507696575 37.0 37.0 37.0 35.0 37.0 7 36.48629301371941 37.0 37.0 37.0 35.0 37.0 8 36.43976902436856 37.0 37.0 37.0 35.0 37.0 9 38.265448718284 39.0 39.0 39.0 37.0 39.0 10 37.9631830283123 39.0 38.0 39.0 35.0 39.0 11 37.62688883774694 39.0 37.0 39.0 35.0 39.0 12 37.16532724163001 39.0 35.0 39.0 35.0 39.0 13 37.05405449581304 39.0 35.0 39.0 34.0 39.0 14 37.726498386413446 40.0 36.0 41.0 32.0 41.0 15 38.02762842004508 40.0 36.0 41.0 33.0 41.0 16 38.294227832145154 40.0 36.0 41.0 34.0 41.0 17 38.366350182280364 40.0 36.0 41.0 35.0 41.0 18 38.317681718090476 40.0 36.0 41.0 35.0 41.0 19 38.27465819163236 40.0 36.0 41.0 35.0 41.0 20 38.08466229751712 40.0 35.0 41.0 34.0 41.0 21 38.05494105309406 40.0 35.0 41.0 34.0 41.0 22 37.990298212763285 40.0 35.0 41.0 34.0 41.0 23 37.978376763307516 40.0 35.0 41.0 34.0 41.0 24 37.94214625318402 40.0 35.0 41.0 34.0 41.0 25 37.78096608591498 40.0 35.0 41.0 34.0 41.0 26 37.68557618377626 40.0 35.0 41.0 34.0 41.0 27 37.59710090538682 40.0 35.0 41.0 34.0 41.0 28 37.55429444162583 39.0 35.0 41.0 34.0 41.0 29 37.508400718660596 40.0 35.0 41.0 34.0 41.0 30 37.47332024854986 40.0 35.0 41.0 34.0 41.0 31 37.35083869887912 40.0 35.0 41.0 33.0 41.0 32 37.23375691070093 40.0 35.0 41.0 33.0 41.0 33 37.139039772162626 40.0 35.0 41.0 33.0 41.0 34 36.97359353833118 40.0 35.0 41.0 33.0 41.0 35 36.87687445407424 40.0 35.0 41.0 32.0 41.0 36 36.80539086976761 39.0 35.0 41.0 32.0 41.0 37 36.687312685353234 39.0 35.0 41.0 32.0 41.0 38 36.67529512681169 39.0 35.0 41.0 32.0 41.0 39 36.62805064621919 39.0 35.0 41.0 32.0 41.0 40 36.53990423089194 39.0 35.0 41.0 31.0 41.0 41 36.36697064161641 39.0 35.0 41.0 31.0 41.0 42 36.39667488715355 39.0 35.0 41.0 31.0 41.0 43 36.36076081782948 39.0 35.0 41.0 31.0 41.0 44 36.35008290225902 39.0 35.0 41.0 31.0 41.0 45 36.2897839310839 38.0 35.0 41.0 31.0 41.0 46 36.24928473918479 38.0 35.0 41.0 31.0 41.0 47 36.15403148193672 38.0 35.0 41.0 31.0 41.0 48 36.033053026063214 38.0 35.0 41.0 31.0 41.0 49 36.006400080548566 38.0 35.0 41.0 31.0 41.0 50 35.89901419537735 38.0 35.0 41.0 31.0 41.0 51 35.82408572145887 37.0 35.0 41.0 31.0 41.0 52 35.5694103740278 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 4.0 13 6.0 14 14.0 15 37.0 16 93.0 17 190.0 18 355.0 19 667.0 20 1186.0 21 1951.0 22 3067.0 23 4852.0 24 7346.0 25 10983.0 26 14456.0 27 16267.0 28 17627.0 29 18865.0 30 21923.0 31 26475.0 32 32482.0 33 45901.0 34 124776.0 35 179811.0 36 85461.0 37 104456.0 38 176502.0 39 629518.0 40 4240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.312015858652956 22.302015283306048 25.14802106815769 13.23794778988331 2 38.10725250929708 22.387794276867393 25.85412863710778 13.650824576727741 3 34.33356521557202 23.26866346913264 28.81827667909765 13.579494636197689 4 30.9316304808331 25.57135870787545 28.95145641224129 14.545554399050154 5 26.136506284357363 30.725747820219784 28.75897671937193 14.378769176050923 6 27.822272724895257 36.624165093180046 26.395216251981026 9.15834592994367 7 86.54838929017883 1.9618675760634765 9.195808859296298 2.293934274461397 8 84.77880526599334 2.319759504992442 9.493289362881756 3.4081458661324655 9 78.92210064386549 4.369432864861472 11.885294133030666 4.823172358242368 10 50.29211931648787 18.39148695793168 17.98325217454979 13.333141551030655 11 34.74271532358033 24.536911119363563 25.676947941565675 15.04342561549043 12 34.325392674264734 18.28537468159779 30.55615124301084 16.833081401126634 13 31.280173022506524 20.43089560591875 32.62896923986213 15.659962131712598 14 19.046467108463354 21.291235374420076 39.45997154648018 20.202325970636387 15 15.606219500075841 28.42945985386189 38.422124180784465 17.542196465277815 16 30.225130629900253 24.132533775478716 30.105746146483327 15.536589448137706 17 27.195275355799758 22.54261489939275 26.90766728211351 23.354442462693985 18 23.04924708011444 22.733460084000647 35.23391774631386 18.98337508957105 19 23.85898247284101 24.65145745832658 28.445412654493722 23.044147414338692 20 18.66726119180497 35.914723127376575 27.17095387286925 18.2470618079492 21 24.812685353236848 25.791232759206856 33.84641637332692 15.549665514229375 22 20.44625998357646 22.409500546579565 37.23501352065234 19.909225949191637 23 22.007280753599844 22.415711677973103 35.755064360397306 19.82194320802975 24 23.317437195654563 27.215085595928635 30.225392151222092 19.242085057194714 25 24.53416514548431 23.883500096762887 31.686446395974667 19.895888361778134 26 18.553434036476993 28.894444764081616 27.476214635779257 25.075906563662137 27 23.32194843845619 25.152532310959312 32.079970605003425 19.445548645581074 28 17.47492010523618 29.090978037439392 27.531395634686096 25.902706222638333 29 21.943992593716168 28.187552631166017 27.156374059177047 22.712080715940772 30 24.912782639168572 25.09107480032847 26.66288332487748 23.33325923562548 31 22.166351097604988 24.338547196752952 31.063698748358952 22.431402957283108 32 26.302899225373842 23.05140463101957 26.133498789156278 24.512197354450308 33 25.11173498475331 23.775949453158916 29.827879742035368 21.28443582005241 34 18.948396612775838 22.544576309306496 33.96514705343927 24.541880024478395 35 20.692090026099827 26.89145296015984 28.776890929917514 23.639566083822814 36 24.222824011841684 25.54357206743066 25.908851973701413 24.32475194702624 37 19.29981588898943 28.232599678851816 27.036531913446904 25.43105251871185 38 23.243884323888928 23.972875008499443 31.080174591634457 21.703066075977173 39 20.50582146462401 26.89720642924018 27.456142874328542 25.14082923180727 40 26.901586911380885 22.908940890950838 28.712883586398796 21.476588611269477 41 19.763427812269533 24.0305404599637 26.134741015434987 30.071290712331777 42 19.039340652443393 26.112838604731444 30.33156980788644 24.516250934938725 43 19.036463917903227 26.721267959976775 31.147189430354256 23.09507869176574 44 24.234723231985104 24.077810438885084 27.420379833567832 24.267086495561983 45 19.426980631730906 24.456493312899802 26.58540763328434 29.53111842208495 46 21.736083142858636 23.646169497199107 28.90464409563312 25.71310326430914 47 18.308911600562794 24.21837814937052 31.75032297883246 25.722387271234226 48 18.492238047167987 28.241687544785528 29.953475356845843 23.312599051200642 49 23.762481105084497 24.381698214855458 29.655929472929927 22.19989120713012 50 21.398459116371757 24.5313537912746 28.81513842323565 25.25504866911799 51 20.784145531385175 24.75554294441626 26.92734676158147 27.532964762617095 52 20.353289153664697 26.061057383008436 28.846717122847025 24.73893634047984 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1043.0 1 4078.0 2 7113.0 3 14151.0 4 21189.0 5 13002.5 6 4816.0 7 5661.0 8 6506.0 9 7476.0 10 8446.0 11 9564.5 12 10683.0 13 11057.0 14 11125.0 15 10819.0 16 9800.5 17 8782.0 18 7977.0 19 7172.0 20 6891.5 21 6611.0 22 7078.5 23 7546.0 24 8209.5 25 8873.0 26 10479.0 27 12085.0 28 13639.0 29 15193.0 30 15922.0 31 16651.0 32 20610.0 33 24569.0 34 25856.5 35 27144.0 36 28824.0 37 30504.0 38 35058.0 39 42199.5 40 44787.0 41 50550.5 42 56314.0 43 59771.5 44 63229.0 45 69095.5 46 74962.0 47 91496.0 48 108030.0 49 128742.5 50 149455.0 51 145061.5 52 140668.0 53 136253.0 54 131838.0 55 121726.5 56 111615.0 57 103186.5 58 94758.0 59 100212.0 60 105666.0 61 79299.0 62 52932.0 63 45277.5 64 31766.5 65 25910.0 66 20973.5 67 16037.0 68 12972.0 69 9907.0 70 9050.5 71 8194.0 72 6395.5 73 4597.0 74 3530.0 75 2463.0 76 1873.5 77 1284.0 78 1138.0 79 992.0 80 903.5 81 815.0 82 608.0 83 401.0 84 243.0 85 85.0 86 85.0 87 85.0 88 74.0 89 34.5 90 6.0 91 3.5 92 1.0 93 3.5 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1529512.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.15980963390858 #Duplication Level Percentage of deduplicated Percentage of total 1 71.3043689585663 13.661781353121105 2 11.57075244794572 4.433868284474434 3 4.7521415713614585 2.7315038358200616 4 2.4515671035617426 1.8788623603598251 5 1.463006227127104 1.4015460402489066 6 0.9228391054775624 1.0608852950205945 7 0.6546208060754715 0.8779687018761272 8 0.49505562078063997 0.7588137161882799 9 0.3952948402021302 0.6816396498785214 >10 3.5749252081515337 15.001336213642816 >50 1.2301585702559596 17.165958394345942 >100 1.170192391092402 32.6282039177767 >500 0.0068532497282116295 0.9605104136155375 >1k 0.007195912214622211 2.5965951372860228 >5k 0.0 0.0 >10k+ 0.0010279874592317444 4.160526686345197 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 30577 1.9991343644247317 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 16978 1.110027250521735 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15816 1.0340553065291413 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 3948 0.2581215446495353 No Hit CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCTT 2745 0.17946900710814953 Illumina Single End Adapter 1 (95% over 21bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCACTTCCGTCG 2697 0.1763307512461491 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2609 0.170577282165815 No Hit GGGGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 2598 0.16985809853077322 No Hit GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 2339 0.15292459294206256 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCCACTTCCGT 2201 0.1439021073388113 No Hit CCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 2021 0.13213364785630974 No Hit GCCCTGCTAGAGGACTTTCGTCTGTATCTATGCTCTGCCCCATGCAGCTCCT 1923 0.12572637547139218 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1739 0.1136963946670572 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1656 0.1082698272390148 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1863993221367338 0.0 2 0.0 0.0 0.0 0.5775044589385373 0.0 3 0.0 0.0 0.0 0.8664201392339518 0.0 4 0.0 0.0 0.0 1.238957262185586 0.0 5 0.0 0.0 0.0 2.377294195795783 0.0 6 0.0 0.0 0.0 3.3026873931031595 0.0 7 0.0 0.0 0.0 4.094900857266893 0.0 8 0.0 0.0 0.0 5.530652914132089 0.0 9 0.0 0.0 0.0 6.266770054762564 0.0 10 6.538033045834226E-5 0.0 0.0 7.1131184325458054 0.0 11 6.538033045834226E-5 0.0 0.0 8.485255427875035 0.0 12 6.538033045834226E-5 0.0 0.0 9.280214865918019 0.0 13 1.961409913750268E-4 0.0 0.0 9.64340260161411 0.0 14 1.961409913750268E-4 0.0 0.0 9.83862826836272 0.0 15 1.961409913750268E-4 0.0 0.0 10.093088514506588 0.0 16 1.961409913750268E-4 0.0 0.0 10.526560105445396 0.0 17 1.961409913750268E-4 0.0 0.0 10.97846894957346 0.0 18 1.961409913750268E-4 0.0 0.0 11.552965913310912 0.0 19 1.961409913750268E-4 0.0 0.0 11.8824173984905 0.0 20 1.961409913750268E-4 0.0 0.0 12.386238225002485 0.0 21 1.961409913750268E-4 0.0 0.0 12.826705511300336 0.0 22 1.961409913750268E-4 0.0 0.0 13.283452499882316 0.0 23 1.961409913750268E-4 0.0 0.0 13.677434371224287 0.0 24 1.961409913750268E-4 0.0 0.0 13.981649048846952 0.0 25 1.961409913750268E-4 0.0 0.0 14.354578453781336 0.0 26 1.961409913750268E-4 0.0 0.0 14.664154318501588 0.0 27 1.961409913750268E-4 0.0 0.0 15.112924906767649 0.0 28 1.961409913750268E-4 0.0 0.0 15.459636799188237 0.0 29 1.961409913750268E-4 0.0 0.0 15.919914325614968 0.0 30 1.961409913750268E-4 0.0 0.0 17.38881421002254 0.0 31 1.961409913750268E-4 0.0 0.0 17.904599637008406 0.0 32 1.961409913750268E-4 0.0 0.0 18.234181882848908 0.0 33 1.961409913750268E-4 0.0 0.0 18.61822594396121 0.0 34 2.6152132183336906E-4 0.0 0.0 19.063792896034812 0.0 35 3.2690165229171136E-4 0.0 0.0 19.474839033626413 0.0 36 3.2690165229171136E-4 0.0 0.0 19.776569258691662 0.0 37 3.922819827500536E-4 0.0 0.0 20.14224144694517 0.0 38 3.922819827500536E-4 0.0 0.0 20.616118082107235 0.0 39 3.922819827500536E-4 0.0 0.0 22.333920884569718 0.0 40 3.922819827500536E-4 0.0 0.0 22.72862193954673 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTAAG 75 0.0 46.000004 1 CACGTGA 155 0.0 46.000004 43 ATTAGCG 20 6.312114E-4 46.0 1 GTCGAAC 25 3.4176897E-5 46.0 1 CGCGGAT 20 6.312114E-4 46.0 25 AAGCGTT 25 3.4176897E-5 46.0 23 TAACGTT 20 6.312114E-4 46.0 32 ACGGGTA 50 1.6370905E-11 46.0 5 ATCGTCC 20 6.312114E-4 46.0 22 TACGCCC 30 1.8618102E-6 46.0 17 CTACGAA 120 0.0 46.0 11 ACAATCG 20 6.312114E-4 46.0 18 AACGCAT 20 6.312114E-4 46.0 34 AATTCGC 30 1.8618102E-6 46.0 10 ATGACGT 25 3.4176897E-5 46.0 19 CGTAATC 20 6.312114E-4 46.0 17 ACGTATA 20 6.312114E-4 46.0 28 ACCGTCA 20 6.312114E-4 46.0 46 TAGGCGT 25 3.4176897E-5 46.0 32 ATAGTGC 30 1.8618102E-6 46.0 19 >>END_MODULE