##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933071.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 815418 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.51838198322823 33.0 31.0 34.0 31.0 34.0 2 32.913200346325446 34.0 31.0 34.0 31.0 34.0 3 32.95646895212026 34.0 31.0 34.0 31.0 34.0 4 36.387830535995036 37.0 37.0 37.0 35.0 37.0 5 36.28282794836513 37.0 37.0 37.0 35.0 37.0 6 36.38783666781945 37.0 37.0 37.0 35.0 37.0 7 36.535135353892116 37.0 37.0 37.0 35.0 37.0 8 36.483247855701 37.0 37.0 37.0 35.0 37.0 9 38.30551447233198 39.0 39.0 39.0 37.0 39.0 10 38.01927109776826 39.0 39.0 39.0 35.0 39.0 11 37.70439946138055 39.0 37.0 39.0 35.0 39.0 12 37.23060197346637 39.0 35.0 39.0 35.0 39.0 13 37.11190824828493 39.0 35.0 39.0 34.0 39.0 14 38.01399404967759 40.0 36.0 41.0 33.0 41.0 15 38.26018925262871 40.0 36.0 41.0 33.0 41.0 16 38.413239590001695 40.0 36.0 41.0 34.0 41.0 17 38.42541494055809 40.0 36.0 41.0 35.0 41.0 18 38.35923293329311 40.0 36.0 41.0 35.0 41.0 19 38.28227485780299 40.0 36.0 41.0 35.0 41.0 20 38.104310917836 40.0 35.0 41.0 34.0 41.0 21 38.059256724771835 40.0 35.0 41.0 34.0 41.0 22 37.99512274686112 40.0 35.0 41.0 34.0 41.0 23 37.97637040143828 40.0 35.0 41.0 34.0 41.0 24 37.952712596484254 40.0 35.0 41.0 34.0 41.0 25 37.80017487963229 40.0 35.0 41.0 34.0 41.0 26 37.69526917482813 40.0 35.0 41.0 34.0 41.0 27 37.59846483643972 40.0 35.0 41.0 34.0 41.0 28 37.58123563620131 40.0 35.0 41.0 34.0 41.0 29 37.54102681078907 40.0 35.0 41.0 34.0 41.0 30 37.482421285769995 40.0 35.0 41.0 34.0 41.0 31 37.34358329102375 40.0 35.0 41.0 33.0 41.0 32 37.19271588314214 40.0 35.0 41.0 33.0 41.0 33 37.045500589881506 40.0 35.0 41.0 33.0 41.0 34 36.87190864072169 40.0 35.0 41.0 32.0 41.0 35 36.74125172610857 40.0 35.0 41.0 32.0 41.0 36 36.63910043683117 39.0 35.0 41.0 32.0 41.0 37 36.510877856510405 39.0 35.0 41.0 31.0 41.0 38 36.4437490955559 39.0 35.0 41.0 31.0 41.0 39 36.39910205563282 39.0 35.0 41.0 31.0 41.0 40 36.293502228304995 39.0 35.0 41.0 31.0 41.0 41 36.13681939814917 39.0 35.0 41.0 31.0 41.0 42 36.156952630430034 39.0 35.0 41.0 31.0 41.0 43 36.11678182232916 38.0 35.0 41.0 31.0 41.0 44 36.08066782926058 38.0 35.0 41.0 31.0 41.0 45 36.027416613319794 38.0 35.0 41.0 31.0 41.0 46 35.96702059557184 38.0 35.0 41.0 31.0 41.0 47 35.884893392100736 38.0 35.0 41.0 31.0 41.0 48 35.76644248716609 37.0 35.0 41.0 30.0 41.0 49 35.73167994819835 37.0 35.0 41.0 30.0 41.0 50 35.606263290729416 37.0 35.0 40.0 30.0 41.0 51 35.54167678417695 37.0 35.0 40.0 30.0 41.0 52 35.29109487404006 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 3.0 13 4.0 14 10.0 15 16.0 16 52.0 17 88.0 18 190.0 19 370.0 20 608.0 21 1015.0 22 1596.0 23 2720.0 24 4241.0 25 6684.0 26 8952.0 27 10107.0 28 10264.0 29 10240.0 30 11223.0 31 13169.0 32 16675.0 33 23829.0 34 62955.0 35 98312.0 36 44683.0 37 58611.0 38 98726.0 39 328070.0 40 2002.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.473965499903116 21.439188244556778 24.498968627133568 13.587877628406536 2 40.440853648067616 22.46958001908224 24.09647567259982 12.993090660250326 3 35.43127573833298 22.86029987074114 28.26685209303695 13.441572297888934 4 31.292907441336837 25.89849623138071 28.62360163744239 14.184994689840059 5 26.447417152920345 30.230016997417273 28.810131736115707 14.512434113546671 6 29.01898167565592 36.94877964430513 26.104893441155337 7.927345238883615 7 86.64574488176616 2.1560721004441894 9.462018253214916 1.7361647645747336 8 85.25185855597988 2.513066917826195 9.807730513675194 2.4273440125187324 9 79.62394747233934 4.344397597305922 11.951538965291421 4.0801159650633165 10 50.85391786789108 20.271075693693298 17.4389086333635 11.436097805052132 11 35.40687107716533 24.961676097412617 24.692856915103665 14.938595910318389 12 34.07614254284306 18.74829841872512 30.256506478885676 16.919052559546145 13 31.67038255226154 19.600131466315435 32.94420775602207 15.785278225400958 14 21.490082387192828 20.147458113507426 38.90360526748245 19.458854231817302 15 18.923791233453272 26.24200103505196 37.097537704588326 17.736670026906445 16 32.14523103488027 22.481230485468803 29.1925123065716 16.18102617307933 17 28.962691527535572 21.327711676710596 27.72075181072775 21.988844985026084 18 26.2225018334155 21.62547307025354 33.22467740471758 18.92734769161338 19 26.399221013026448 23.019482032528103 28.577367681360972 22.00392927308448 20 21.74725110311521 34.00673029047679 26.554601443676738 17.691417162731263 21 27.227385218378796 23.82017566450581 33.486015761241475 15.466423355873921 22 23.709312279101024 20.479312450792108 36.56958762254451 19.241787647562354 23 24.11352214447069 21.636510354198705 34.98402046557717 19.26594703575344 24 24.87374573531612 26.077668140757254 29.74707450657209 19.301511617354535 25 26.09925216269447 22.744408389316888 31.533520231341473 19.622819216647166 26 20.46545452761651 26.93465192085532 28.175610545756903 24.424283005771272 27 24.30777834190562 23.071357267070386 32.281480173358936 20.33938421766505 28 19.347009754506278 27.47474301523881 28.81356555778754 24.364681672467373 29 23.27260374433726 26.57851555889127 28.073086441555127 22.075794255216344 30 26.090177062561775 22.450816636375453 28.73716302558933 22.72184327547344 31 24.24989391943764 22.805603996968426 31.873223303876046 21.071278779717886 32 27.193537547613616 22.717183088918812 26.995479619042012 23.09379974442556 33 25.592518193123038 22.163847253801116 30.433103022008346 21.8105315310675 34 20.41885266207025 22.995690553801854 33.489817492378144 23.09563929174975 35 22.597612512846172 27.044779487330423 28.336877527844617 22.020730471978787 36 25.981030587992908 24.425632007142347 25.868818201217042 23.724519203647702 37 22.281087736596444 26.82403380842709 27.080711978396355 23.81416647658011 38 24.332183003073272 24.300788062073686 29.37180685243642 21.99522208241663 39 22.267720359373968 26.527130870302102 25.58013190780679 25.625016862517136 40 27.340946606525733 23.421852350573573 27.569418384190687 21.66778265871001 41 21.405831119744718 23.820298300994093 26.60696722417214 28.166903355089048 42 20.442153594843383 25.40095999843025 30.624906489677688 23.53197991704868 43 20.646343347828967 25.505691559421056 30.663169074020928 23.184796018729045 44 24.739826690114764 23.735679124081148 28.03678604102436 23.48770814477973 45 20.689511391703398 23.29921586229394 26.93734992359747 29.073922822405194 46 22.872195610104264 23.483661140666502 28.729436926827713 24.914706322401518 47 19.639743052029758 23.084356734828027 32.2016438194889 25.074256393653314 48 20.60857130943884 28.012136106880153 29.090478748322944 22.288813835358063 49 25.18990260210101 24.702667834166032 28.920995121520498 21.18643444221246 50 22.855762320674796 24.720450124966582 27.44555553102826 24.978232023330367 51 22.12975431005938 25.57240580904518 26.612976412097844 25.684863468797598 52 22.676222501833415 25.755992631999785 27.500619314265812 24.067165551900988 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 450.0 1 2125.0 2 3800.0 3 8049.5 4 12299.0 5 7810.5 6 3322.0 7 3386.0 8 3450.0 9 3785.5 10 4121.0 11 4504.0 12 4887.0 13 5148.0 14 5103.0 15 4797.0 16 4564.0 17 4331.0 18 4132.0 19 3933.0 20 3879.0 21 3825.0 22 4003.5 23 4182.0 24 4310.5 25 4439.0 26 5568.0 27 6697.0 28 6810.0 29 6923.0 30 7970.5 31 9018.0 32 10142.5 33 11267.0 34 12709.5 35 14152.0 36 15603.5 37 17055.0 38 18407.0 39 20895.5 40 22032.0 41 25389.0 42 28746.0 43 30113.0 44 31480.0 45 34073.5 46 36667.0 47 41718.0 48 46769.0 49 58031.5 50 69294.0 51 68645.0 52 67996.0 53 69781.5 54 71567.0 55 66851.0 56 62135.0 57 59355.0 58 56575.0 59 57643.5 60 58712.0 61 45676.0 62 32640.0 63 28413.5 64 21221.0 65 18255.0 66 16194.0 67 14133.0 68 11745.0 69 9357.0 70 7639.0 71 5921.0 72 5104.0 73 4287.0 74 3490.0 75 2693.0 76 2167.0 77 1641.0 78 1330.0 79 1019.0 80 853.5 81 688.0 82 507.0 83 326.0 84 227.0 85 128.0 86 82.0 87 36.0 88 21.0 89 7.5 90 9.0 91 5.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 815418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.72090693611258 #Duplication Level Percentage of deduplicated Percentage of total 1 74.00864192966837 18.295607496114112 2 8.831956032570947 4.3666792629004885 3 3.208338608814862 2.3793912050414736 4 1.6718227732958821 1.6531590076928455 5 1.0596773321349553 1.3098092355008146 6 0.7740579560257737 1.1481248816442404 7 0.6137852302543234 1.0621329289114292 8 0.5277714287227372 1.0437590698395167 9 0.4457468152598296 0.9917338983396133 >10 8.122704990602479 49.67314552042091 >50 0.678191927172651 9.974683407827936 >100 0.04634228451635964 2.181858057855494 >500 0.006477953749598659 1.1037403002701685 >1k 0.0029898248075070732 0.9397806641474459 >5k 9.966082691690245E-4 2.063846539143572 >10k+ 4.983041345845122E-4 1.8125485243499173 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 14714 1.804473288546488 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8675 1.0638715358257973 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 8079 0.9907801888111374 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1546 0.18959601088030922 No Hit GGGGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCT 1525 0.187020644626437 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCTTCACCCGTCG 1221 0.1497391521894292 No Hit CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCTT 1120 0.1373528668731865 Illumina Single End Adapter 2 (95% over 21bp) TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1115 0.13673968443178836 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1102 0.13514541008415315 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCTTCACCCGT 966 0.11846684767812336 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.226364882796308E-4 0.0 0.0 0.14029614259189765 0.0 2 2.452729765592616E-4 0.0 0.0 0.3117419532068215 0.0 3 2.452729765592616E-4 0.0 0.0 0.48551785709905837 0.0 4 2.452729765592616E-4 0.0 0.0 0.6948583425923882 0.0 5 2.452729765592616E-4 0.0 0.0 1.4113007071219914 0.0 6 2.452729765592616E-4 0.0 0.0 1.9501654366226893 0.0 7 2.452729765592616E-4 0.0 0.0 2.3546205749689118 0.0 8 2.452729765592616E-4 0.0 0.0 3.145993833837369 0.0 9 2.452729765592616E-4 0.0 0.0 3.573259359003603 0.0 10 2.452729765592616E-4 0.0 0.0 4.205205183108541 0.0 11 2.452729765592616E-4 0.0 0.0 5.231059407567653 0.0 12 2.452729765592616E-4 0.0 0.0 5.898569813273683 0.0 13 2.452729765592616E-4 0.0 0.0 6.228216693769331 0.0 14 2.452729765592616E-4 0.0 0.0 6.529902454937222 0.0 15 2.452729765592616E-4 0.0 0.0 6.800070638617249 0.0 16 2.452729765592616E-4 0.0 0.0 7.154244816768823 0.0 17 2.452729765592616E-4 0.0 0.0 7.518475186959327 0.0 18 2.452729765592616E-4 0.0 0.0 7.966098369179979 0.0 19 2.452729765592616E-4 0.0 0.0 8.246568017875495 0.0 20 2.452729765592616E-4 0.0 0.0 8.66672062672151 0.0 21 2.452729765592616E-4 0.0 0.0 9.029969905005776 0.0 22 2.452729765592616E-4 0.0 0.0 9.415171114692097 0.0 23 2.452729765592616E-4 0.0 0.0 9.740157808633118 0.0 24 3.6790946483889245E-4 0.0 0.0 10.007627989570993 0.0 25 3.6790946483889245E-4 0.0 0.0 10.332982592976853 0.0 26 3.6790946483889245E-4 0.0 0.0 10.614433333578607 0.0 27 3.6790946483889245E-4 0.0 0.0 11.046236408811186 0.0 28 3.6790946483889245E-4 0.0 0.0 11.382260386697375 0.0 29 3.6790946483889245E-4 0.0 0.0 11.803148814473067 0.0 30 3.6790946483889245E-4 0.0 0.0 13.104199318631672 0.0 31 3.6790946483889245E-4 0.0 0.0 13.525333019383924 0.0 32 3.6790946483889245E-4 0.0 0.0 13.821500138579232 0.0 33 3.6790946483889245E-4 0.0 0.0 14.183645688468982 0.0 34 3.6790946483889245E-4 0.0 0.0 14.593496832299508 0.0 35 3.6790946483889245E-4 0.0 0.0 14.963736390415713 0.0 36 3.6790946483889245E-4 0.0 0.0 15.22065983336154 0.0 37 3.6790946483889245E-4 0.0 0.0 15.58942775361839 0.0 38 3.6790946483889245E-4 0.0 0.0 16.020004463968174 0.0 39 3.6790946483889245E-4 0.0 0.0 17.48992541248783 0.0 40 3.6790946483889245E-4 0.0 0.0 17.86789106936565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 105 0.0 46.000004 2 AACGTAT 20 6.3103717E-4 46.0 15 AATCCCG 20 6.3103717E-4 46.0 14 TCGTTAG 45 3.092282E-10 46.0 1 AAATCCG 20 6.3103717E-4 46.0 38 TTGTGCG 55 1.8189894E-12 46.0 1 ATATGCG 20 6.3103717E-4 46.0 1 TACGGGT 45 3.092282E-10 46.0 4 TATGCGT 30 1.8607334E-6 46.0 11 TCGTAAT 20 6.3103717E-4 46.0 43 TCGTAAG 30 1.8607334E-6 46.0 1 ACGTATC 20 6.3103717E-4 46.0 16 ATACGGA 25 3.4162764E-5 46.0 4 TATCGTC 20 6.3103717E-4 46.0 19 CGTTAGG 125 0.0 44.16 2 CGTTTTT 3060 0.0 42.993465 1 GCAAGGC 1785 0.0 42.134453 46 CGAATAT 110 0.0 41.81818 14 GGGCGAT 490 0.0 41.775513 7 CTAGACG 150 0.0 41.399998 17 >>END_MODULE