##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933070.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1382688 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.481464365062834 33.0 31.0 34.0 31.0 34.0 2 32.86845333148187 34.0 31.0 34.0 31.0 34.0 3 32.871231253905435 34.0 31.0 34.0 31.0 34.0 4 36.345384497442666 37.0 37.0 37.0 35.0 37.0 5 36.241533158601214 37.0 37.0 37.0 35.0 37.0 6 36.33216748825476 37.0 37.0 37.0 35.0 37.0 7 36.51812628734754 37.0 37.0 37.0 35.0 37.0 8 36.46667360966465 37.0 37.0 37.0 35.0 37.0 9 38.29156903075748 39.0 39.0 39.0 37.0 39.0 10 37.9996036705316 39.0 39.0 39.0 35.0 39.0 11 37.67665301210396 39.0 37.0 39.0 35.0 39.0 12 37.30813314355805 39.0 35.0 39.0 35.0 39.0 13 37.23174425466917 39.0 37.0 39.0 35.0 39.0 14 38.069720717905994 40.0 37.0 41.0 33.0 41.0 15 38.331019000671155 41.0 37.0 41.0 33.0 41.0 16 38.55072221643639 41.0 37.0 41.0 34.0 41.0 17 38.587409451734594 41.0 37.0 41.0 35.0 41.0 18 38.450987496817795 40.0 37.0 41.0 35.0 41.0 19 38.347909289731305 40.0 36.0 41.0 35.0 41.0 20 38.136354694623805 40.0 35.0 41.0 34.0 41.0 21 38.09318443495568 40.0 35.0 41.0 34.0 41.0 22 38.04002421370548 40.0 35.0 41.0 34.0 41.0 23 38.01528544400472 40.0 35.0 41.0 34.0 41.0 24 37.95751463815409 40.0 35.0 41.0 34.0 41.0 25 37.81417716795112 40.0 35.0 41.0 34.0 41.0 26 37.70423985743711 40.0 35.0 41.0 34.0 41.0 27 37.58061543891319 39.0 35.0 41.0 34.0 41.0 28 37.537871161100696 39.0 35.0 41.0 34.0 41.0 29 37.46909859635724 40.0 35.0 41.0 34.0 41.0 30 37.40426979911592 40.0 35.0 41.0 34.0 41.0 31 37.231697244786965 40.0 35.0 41.0 33.0 41.0 32 37.0869039146937 39.0 35.0 41.0 33.0 41.0 33 36.92767421139114 39.0 35.0 41.0 33.0 41.0 34 36.69655410331181 39.0 35.0 41.0 32.0 41.0 35 36.571806510217776 39.0 35.0 41.0 32.0 41.0 36 36.489740997245946 39.0 35.0 41.0 32.0 41.0 37 36.381793289592444 39.0 35.0 41.0 31.0 41.0 38 36.38246878543822 39.0 35.0 41.0 31.0 41.0 39 36.34060250757944 39.0 35.0 41.0 31.0 41.0 40 36.27398950450138 39.0 35.0 41.0 31.0 41.0 41 36.14114102386077 39.0 35.0 41.0 31.0 41.0 42 36.14276177995325 39.0 35.0 41.0 31.0 41.0 43 36.09998712652457 38.0 35.0 41.0 31.0 41.0 44 36.05377785877942 38.0 35.0 41.0 31.0 41.0 45 35.994151970654265 38.0 35.0 41.0 31.0 41.0 46 35.93846334097063 38.0 35.0 41.0 31.0 41.0 47 35.869375448401954 38.0 35.0 41.0 31.0 41.0 48 35.76636956421116 38.0 35.0 41.0 30.0 41.0 49 35.71927289453586 37.0 35.0 41.0 30.0 41.0 50 35.61311590177972 37.0 35.0 41.0 30.0 41.0 51 35.537850910689905 37.0 35.0 40.0 30.0 41.0 52 35.303450236061934 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 4.0 14 12.0 15 44.0 16 85.0 17 182.0 18 319.0 19 695.0 20 1086.0 21 1856.0 22 2859.0 23 4522.0 24 7412.0 25 11833.0 26 15280.0 27 17036.0 28 17251.0 29 17734.0 30 19425.0 31 23211.0 32 28552.0 33 39477.0 34 103288.0 35 150303.0 36 106696.0 37 104813.0 38 150107.0 39 554640.0 40 3959.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.91496273924414 22.194811844754565 25.793888426022356 17.096336989978937 2 39.553536300307805 22.901768150153902 24.611698373024137 12.932997176514153 3 30.722259830127985 23.45554456247541 32.435155291721635 13.387040315674975 4 27.458038255918904 26.718464324562014 31.82901710291837 13.994480316600708 5 24.413316670138165 31.059935430118724 30.44526313962369 14.08148476011942 6 27.2693478210558 36.57122937351015 26.881480131454094 9.277942673979958 7 84.21133328704667 1.7178857413964683 11.687813881367308 2.3829670901895437 8 82.51340866486149 2.2141654516420193 12.044510402925317 3.2279154805711774 9 76.8908097849985 4.064619060843806 14.592879955564813 4.4516911985928855 10 45.405398759517695 24.70376541924136 19.109951051864197 10.78088476937675 11 30.327810757018213 22.87421312689486 31.857440000925735 14.940536115161192 12 31.289849915526858 18.126504316230417 33.143919669513295 17.43972609872943 13 29.344580990071513 19.75253998009674 34.785649401745005 16.11722962808674 14 17.614530537619476 21.581513689277696 39.6105990650096 21.193356708093223 15 15.103262630470503 28.354263579346895 39.46334964937861 17.079124140804 16 27.094398736374366 26.158178851628133 31.78381529311023 14.963607118887268 17 24.892311208313085 26.0630742437918 29.775770094193337 19.268844453701774 18 21.073300701242797 25.574533083385404 35.18320835936958 18.168957856002223 19 21.505213034321553 27.594439237195957 30.029044874910323 20.87130285357217 20 16.861070610289524 37.35759621838043 28.834993867018444 16.946339304311604 21 22.057687634520587 29.09289731305978 33.89918766923557 14.950227383184059 22 19.140615959638037 25.459539679233494 36.53391075933254 18.865933601795923 23 18.832014163715893 25.63984065819621 36.57231421694554 18.955830961142357 24 20.2528697725011 28.85972829734546 32.246320211067136 18.6410817190863 25 23.150848202920688 27.481687842810526 31.24334629359624 18.124117660672546 26 18.27028223286815 30.11510912078502 28.482564396306326 23.1320442500405 27 19.946509986345436 26.840834664074613 33.727059177486176 19.48559617209378 28 17.01142991043533 29.749444560161077 29.285927121664468 23.95319840773913 29 20.402288875002895 29.98897799069638 27.92929424425467 21.679438890046054 30 23.52338343863547 25.854205721030343 28.37726226017728 22.24514858015691 31 20.679719502881344 26.89160533685112 32.55246302853572 19.876212131731815 32 23.61899430674165 26.642814575667106 27.104957879145548 22.633233238445694 33 23.01401328426948 27.42028570436715 28.9713225253998 20.59437848596357 34 17.73711784581916 27.8937113795737 33.604833483764956 20.764337290842185 35 18.09793677243167 31.378879400124976 29.22734557615312 21.29583825129024 36 20.374155268578306 31.13826112615427 26.728372561271957 21.759211043995464 37 17.383386562984562 33.421567266078824 28.107497859242287 21.087548311694324 38 20.177870929667428 29.8404990858386 29.839920502673056 20.141709481820914 39 17.354240436020273 31.892661251128235 27.048546020504986 23.704552292346502 40 23.31531046772663 28.306385822398113 29.048780346687032 19.329523363188226 41 18.74732405285936 27.446900529982184 28.07408468143211 25.731690735726353 42 17.399876183202572 29.98066085769168 30.789592446018187 21.829870513087553 43 17.928411904927213 29.522929250850517 31.123434932537204 21.425223911685066 44 21.295259668124697 27.461437432016478 28.142936078131868 23.100366821726954 45 18.221247309588282 27.592124904533776 27.233981925061908 26.952645860816034 46 21.029328380661436 27.242949964127845 28.301033928116826 23.426687727093892 47 17.550669420722535 26.876200560068504 31.860766854127615 23.71236316508135 48 17.414919345506725 30.52937466731468 29.791319516767338 22.264386470411257 49 21.36996921937559 27.399746001990327 29.574206183896873 21.656078594737206 50 19.201005577541714 27.80547744682821 30.057540095813373 22.935976879816707 51 18.001096415098704 28.490375269041174 29.564659561665398 23.943868754194728 52 18.470399685250758 28.694036543312734 29.646890694068368 23.18867307736814 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 990.0 1 2863.0 2 4736.0 3 26108.0 4 47480.0 5 26881.0 6 6282.0 7 7093.5 8 7905.0 9 10412.0 10 12919.0 11 15885.0 12 18851.0 13 19455.5 14 18556.5 15 17053.0 16 15637.5 17 14222.0 18 12538.5 19 10855.0 20 10268.5 21 9682.0 22 9434.5 23 9187.0 24 9913.5 25 10640.0 26 11784.0 27 12928.0 28 14638.0 29 16348.0 30 17716.5 31 19085.0 32 20985.5 33 22886.0 34 26621.5 35 30357.0 36 31495.0 37 32633.0 38 36324.0 39 42575.5 40 45136.0 41 51625.0 42 58114.0 43 68706.5 44 79299.0 45 90399.0 46 101499.0 47 103311.0 48 105123.0 49 110809.5 50 116496.0 51 100994.5 52 85493.0 53 80583.0 54 75673.0 55 73352.5 56 71032.0 57 67581.5 58 64131.0 59 69245.0 60 74359.0 61 59297.5 62 44236.0 63 38701.5 64 28029.0 65 22891.0 66 19364.0 67 15837.0 68 12044.5 69 8252.0 70 7392.0 71 6532.0 72 5059.0 73 3586.0 74 3134.5 75 2683.0 76 2077.5 77 1472.0 78 1271.5 79 1071.0 80 918.0 81 765.0 82 631.5 83 498.0 84 287.5 85 77.0 86 61.5 87 46.0 88 64.5 89 48.5 90 14.0 91 11.0 92 8.0 93 4.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1382688.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.622169667969697 #Duplication Level Percentage of deduplicated Percentage of total 1 70.91715504929948 16.752170689442664 2 10.77889246791236 5.092416534196528 3 4.624970072322354 3.277554832730422 4 2.588918506035104 2.446234888244314 5 1.6042367187134339 1.8947775978517858 6 1.0481523657550704 1.4855779813050065 7 0.7814852898332071 1.2922264676623745 8 0.5876746532455626 1.110572029482555 9 0.4764179167927478 1.0128622377005063 >10 5.017578091278389 27.18658376107633 >50 1.2246950079117402 20.23701019452441 >100 0.33937218140168884 10.412424691367345 >500 0.003996230396650384 0.7008809634792044 >1k 0.005533242087669763 2.2599998162415327 >5k 3.0740233820387573E-4 0.6373427493221069 >10k+ 6.148046764077515E-4 4.201364565372959 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40286 2.913600175889282 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 17572 1.270857923117869 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 8777 0.6347780554976973 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 2873 0.20778367932606634 No Hit GGGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT 2873 0.20778367932606634 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTT 2528 0.18283228031197205 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT 2147 0.15527725705292877 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1995 0.1442841769075887 No Hit CGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 1862 0.13466523178041612 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1833 0.13256786780531832 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG 1750 0.1265650674627971 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTGTCTCTTATACACATCTGA 1657 0.11983903816334561 No Hit CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGCT 1584 0.11455946677775464 No Hit GGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCAAAG 1526 0.11036473882755907 No Hit CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGCTT 1431 0.10349406373672153 Illumina Single End Adapter 2 (95% over 21bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1410 0.10197528292716795 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10674859404290772 0.0 2 7.232289569302691E-5 0.0 0.0 0.33637378786826816 0.0 3 7.232289569302691E-5 0.0 0.0 0.6226278090212687 0.0 4 7.232289569302691E-5 0.0 0.0 0.9481531625355829 0.0 5 7.232289569302691E-5 0.0 0.0 2.0086237820824366 0.0 6 7.232289569302691E-5 0.0 0.0 3.3633039413085237 0.0 7 7.232289569302691E-5 0.0 0.0 4.520976532666806 0.0 8 7.232289569302691E-5 0.0 0.0 6.245805272049805 0.0 9 7.232289569302691E-5 0.0 0.0 7.472546228794927 0.0 10 7.232289569302691E-5 0.0 0.0 8.53229361938485 0.0 11 7.232289569302691E-5 0.0 0.0 9.763373949871555 0.0 12 7.232289569302691E-5 0.0 0.0 10.461289893309264 0.0 13 7.232289569302691E-5 0.0 0.0 10.806414751556389 0.0 14 7.232289569302691E-5 0.0 0.0 11.240062834131779 0.0 15 7.232289569302691E-5 0.0 0.0 11.498689509130042 0.0 16 1.4464579138605382E-4 0.0 0.0 11.801650119188132 0.0 17 1.4464579138605382E-4 0.0 0.0 12.155092110439954 0.0 18 1.4464579138605382E-4 0.0 0.0 12.548890277488486 0.0 19 1.4464579138605382E-4 0.0 0.0 12.808818764609224 0.0 20 1.4464579138605382E-4 0.0 0.0 13.167757295933718 0.0 21 1.4464579138605382E-4 0.0 0.0 13.496898794232683 0.0 22 1.4464579138605382E-4 0.0 0.0 13.851714920502673 0.0 23 1.4464579138605382E-4 0.0 0.0 14.177167951121294 0.0 24 2.8929158277210765E-4 0.0 0.0 14.435433011641093 0.0 25 2.8929158277210765E-4 0.0 0.0 14.713586868476474 0.0 26 2.8929158277210765E-4 0.0 0.0 14.953698882177324 0.0 27 2.8929158277210765E-4 0.0 0.0 15.281538568353815 0.0 28 2.8929158277210765E-4 0.0 0.0 15.524254206299613 0.0 29 2.8929158277210765E-4 0.0 0.0 15.86084496285496 0.0 30 2.8929158277210765E-4 0.0 0.0 16.79482283783471 0.0 31 2.8929158277210765E-4 0.0 0.0 17.18095477793978 0.0 32 2.8929158277210765E-4 0.0 0.0 17.553996273924415 0.0 33 2.8929158277210765E-4 0.0 0.0 17.87221701497373 0.0 34 2.8929158277210765E-4 0.0 0.0 18.200852253002846 0.0 35 2.8929158277210765E-4 0.0 0.0 18.531440209215674 0.0 36 2.8929158277210765E-4 0.0 0.0 18.78970526973547 0.0 37 2.8929158277210765E-4 0.0 0.0 19.10170624175519 0.0 38 2.8929158277210765E-4 0.0 0.0 19.462886782846166 0.0 39 2.8929158277210765E-4 0.0 0.0 20.819808951838738 0.0 40 2.8929158277210765E-4 0.0 0.0 21.26076164687912 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGC 25 3.417518E-5 46.0 15 GCGACTT 30 1.8616793E-6 46.0 22 CGGTTCA 20 6.3119014E-4 46.0 39 CCTCGTA 20 6.3119014E-4 46.0 45 ACGGGTA 25 3.417518E-5 46.0 5 TCGATAG 25 3.417518E-5 46.0 1 CGTTAAT 20 6.3119014E-4 46.0 25 AATTCGG 20 6.3119014E-4 46.0 40 GCGATCG 20 6.3119014E-4 46.0 9 CACGTAG 25 3.417518E-5 46.0 1 TCGACGC 20 6.3119014E-4 46.0 15 TATCGCG 25 3.417518E-5 46.0 1 AATCGAG 35 1.01978E-7 45.999996 1 CGTTTTT 9000 0.0 44.44111 1 TGCGTAG 110 0.0 43.909092 1 CGTAAGG 155 0.0 43.032257 2 CGGGATC 295 0.0 42.101696 6 TACCGGG 115 0.0 42.0 3 TAGTACG 55 4.7293724E-11 41.818184 1 GCGAGAC 305 0.0 41.47541 21 >>END_MODULE