SRR2933068.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933068.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1137079
Sequences flagged as poor quality	0
Sequence length	52
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	6944	0.6106875599672494	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5422	0.47683582231313737	No Hit
GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	3862	0.3396421884495272	No Hit
GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	3573	0.31422618832992255	No Hit
AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	1900	0.16709481047490982	No Hit
TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC	1791	0.15750884503187554	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC	1165	0.10245550221224735	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCGG	20	6.311424E-4	46.000004	1
CGCGATA	20	6.311424E-4	46.000004	10
ACGTAGG	105	0.0	43.809525	1
TACGCGG	125	0.0	42.32	1
TACGGGA	360	0.0	42.166668	3
TCACGAC	150	0.0	41.399998	24
CGACGGT	150	0.0	41.399998	27
CGGTCTA	150	0.0	41.399998	30
TTACGGG	430	0.0	40.651165	2
CTAACGG	165	0.0	40.424244	1
CGCACTT	2750	0.0	40.396366	34
CGGGATA	245	0.0	40.367348	5
GCACTTA	2760	0.0	40.333336	35
AATACGG	40	2.9105286E-7	40.250004	1
ACGGGAT	470	0.0	40.12766	4
CCCGCAC	2800	0.0	40.085716	32
CACGACG	155	0.0	40.064514	25
ACGGGTA	145	0.0	39.65517	4
CGTTTTT	2395	0.0	39.27766	1
CCGCACT	2830	0.0	39.25442	33