##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933067.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1505693 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.51996588946086 33.0 31.0 34.0 31.0 34.0 2 32.88016547862014 34.0 31.0 34.0 31.0 34.0 3 32.96118000150097 34.0 31.0 34.0 31.0 34.0 4 36.387084883837545 37.0 37.0 37.0 35.0 37.0 5 36.366192178618086 37.0 37.0 37.0 35.0 37.0 6 36.497519082575266 37.0 37.0 37.0 35.0 37.0 7 36.53809109825177 37.0 37.0 37.0 35.0 37.0 8 36.39705371546524 37.0 37.0 37.0 35.0 37.0 9 38.04819774017678 39.0 39.0 39.0 35.0 39.0 10 37.94141036718641 39.0 38.0 39.0 35.0 39.0 11 37.495099598656566 39.0 37.0 39.0 35.0 39.0 12 37.33988668340757 39.0 37.0 39.0 35.0 39.0 13 37.21846153233096 39.0 37.0 39.0 34.0 39.0 14 38.65220333759937 41.0 38.0 41.0 35.0 41.0 15 38.75272980614242 41.0 38.0 41.0 35.0 41.0 16 38.75125340955959 41.0 38.0 41.0 35.0 41.0 17 38.74489553979463 41.0 37.0 41.0 35.0 41.0 18 38.678066511566435 40.0 37.0 41.0 35.0 41.0 19 38.548285739523266 40.0 37.0 41.0 35.0 41.0 20 38.461269993285484 40.0 35.0 41.0 35.0 41.0 21 38.420822837059085 40.0 35.0 41.0 35.0 41.0 22 38.376034822503655 40.0 35.0 41.0 35.0 41.0 23 38.33395785196584 40.0 35.0 41.0 35.0 41.0 24 38.28110710483478 40.0 35.0 41.0 35.0 41.0 25 38.21112471134554 40.0 35.0 41.0 35.0 41.0 26 38.11948584472399 40.0 35.0 41.0 34.0 41.0 27 38.06466856125385 40.0 35.0 41.0 34.0 41.0 28 38.05925377882477 40.0 35.0 41.0 34.0 41.0 29 38.02205960976109 40.0 35.0 41.0 34.0 41.0 30 37.93689749504049 40.0 35.0 41.0 34.0 41.0 31 37.87168366991146 40.0 35.0 41.0 34.0 41.0 32 37.77602339919227 40.0 35.0 41.0 34.0 41.0 33 37.61436295446681 40.0 35.0 41.0 34.0 41.0 34 37.496458441395426 40.0 35.0 41.0 34.0 41.0 35 37.35434049304872 40.0 35.0 41.0 33.0 41.0 36 37.27795905274183 40.0 35.0 41.0 33.0 41.0 37 37.16706659325639 40.0 35.0 41.0 33.0 41.0 38 37.153321427409175 40.0 35.0 41.0 33.0 41.0 39 37.052053107771634 40.0 35.0 41.0 33.0 41.0 40 37.00580729272169 39.0 35.0 41.0 33.0 41.0 41 36.95971091052426 39.0 35.0 41.0 33.0 41.0 42 36.89081240332525 39.0 35.0 41.0 33.0 41.0 43 36.78324731535579 39.0 35.0 41.0 33.0 41.0 44 36.69126574939247 39.0 35.0 41.0 33.0 41.0 45 36.62543426847306 39.0 35.0 41.0 33.0 41.0 46 36.52970160583864 39.0 35.0 41.0 32.0 41.0 47 36.43786150297571 38.0 35.0 41.0 32.0 41.0 48 36.38250626123652 38.0 35.0 41.0 32.0 41.0 49 36.286513253365726 38.0 35.0 41.0 32.0 41.0 50 36.18153966313186 38.0 35.0 41.0 32.0 41.0 51 36.07261440413152 37.0 35.0 41.0 31.0 41.0 52 35.81786127716606 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 5.0 13 8.0 14 17.0 15 22.0 16 52.0 17 133.0 18 226.0 19 445.0 20 817.0 21 1329.0 22 2115.0 23 3456.0 24 5388.0 25 8334.0 26 11379.0 27 13073.0 28 14023.0 29 15121.0 30 17599.0 31 21462.0 32 27002.0 33 36991.0 34 91782.0 35 180917.0 36 95346.0 37 118265.0 38 186871.0 39 645431.0 40 8077.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.46705271260476 22.09109028201632 23.488918391730586 19.95293861364833 2 27.885631400292095 23.781209051247497 26.76508425024225 21.56807529821816 3 28.1166213829778 24.10013196581242 26.581912780360938 21.20133387084884 4 23.831684148096592 28.412033528747227 24.270219759273637 23.486062563882545 5 22.49442615460124 37.53514162581615 22.237268819075336 17.733163400507273 6 87.28572159132041 3.052614311151078 7.4447447122354955 2.216919385293018 7 88.70772461584134 2.385878130535242 5.98036917220177 2.926028081421644 8 81.8720017958508 4.38535611177046 9.481149211691891 4.261492880686833 9 41.259539627267976 28.47957717808345 14.918645434361451 15.342237760287123 10 34.69286235640333 21.816399491795472 25.13905557108919 18.351682580712 11 32.009911715070736 19.36497014995753 30.037929378698045 18.58718875627369 12 23.647250800794055 27.321306534599017 30.499444441861655 18.531998222745276 13 17.997759171358304 31.78091417041854 31.140743830249594 19.080582827973565 14 17.007185395694872 25.96830828063888 38.20187780643199 18.822628517234257 15 21.229892149329245 20.406616753880108 37.58269448021609 20.78079661657456 16 20.465592919672204 22.966567553943598 28.981007416518505 27.58683210986569 17 22.003290179339345 26.31060913479707 30.711506263228962 20.974594422634627 18 25.462428263928967 29.937178428803215 25.852547630891554 18.747845676376258 19 24.63868796627201 25.965518867391957 26.149088824879975 23.24670434145606 20 22.889061714439794 28.04735095401254 28.202030560014556 20.861556771533106 21 20.226101868043486 25.68412020245827 27.914189678772498 26.175588250725745 22 18.10654628798832 30.094514618849928 27.32615480048058 24.472784292681176 23 19.16732029703266 28.73241756453673 32.07599424318238 20.024267895248236 24 23.730003393786117 25.177044722928247 28.73547263618812 22.357479247097515 25 17.94668634309916 28.990039802270452 26.70424847561887 26.359025379011523 26 17.05062054482554 26.954963594836396 31.08887402677704 24.905541833561024 27 19.17289912352651 25.671634257448233 32.748574908696526 22.406891710328733 28 18.65127884635181 29.13900775257639 28.2700391115586 23.939674289513203 29 21.23507248821639 26.84099613931924 29.467892857308893 22.45603851515548 30 25.20354414877402 26.776175488628823 26.636571997080416 21.383708365516743 31 24.7620198805467 29.237766264437703 24.646259230799373 21.353954624216225 32 24.262582080145158 27.99415285851764 23.519867595851213 24.223397465485995 33 18.37811559195666 27.393432791412327 29.137613045952925 25.090838570678088 34 20.311909532686943 28.26957420935078 27.802148246687736 23.616368011274545 35 24.592197745489948 30.880797081476768 24.79961054477905 19.72739462825423 36 19.85484424779819 31.838429214986057 25.577923255271823 22.72880328194393 37 22.27333194748199 30.999612802875486 26.279992003682022 20.447063245960496 38 20.303939780552874 29.363090616745914 24.619228488144664 25.713741114556555 39 23.02381694010665 26.155132553581637 27.91744399422724 22.90360651208447 40 18.81246708326332 23.97826117276231 30.569379016838095 26.639892727136278 41 19.817120754363604 29.046292969416744 25.501413634784782 25.635172641434874 42 19.534061724401987 25.89146658714625 27.539080011662403 27.03539167678936 43 20.675728717607107 26.560859351806776 30.085282989294633 22.678128941291483 44 20.89868253355764 29.22056488274834 25.33331827935708 24.54743430433694 45 22.127618312630794 27.472532581342946 27.35810022361796 23.0417488824083 46 23.050183536750186 27.199568570751143 26.838339555274548 22.911908337224123 47 19.996041689773413 28.614066745345827 28.58623902747771 22.803652537403043 48 20.999499898053585 25.884692297832295 28.118613821011323 24.997193983102797 49 19.557041176388545 26.074770886229796 30.456075707332104 23.91211223004955 50 18.981226584702192 27.176589118764582 30.1017538103717 23.74043048616152 51 19.354343813778772 24.426360486500236 28.944213727499562 27.275081972221425 52 19.42999004445129 24.233293241052458 30.13921164540182 26.19750506909443 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2552.0 1 2703.0 2 2854.0 3 11054.0 4 19254.0 5 11779.0 6 4304.0 7 4715.5 8 5127.0 9 6267.0 10 7407.0 11 8558.0 12 9709.0 13 9583.5 14 8710.5 15 7963.0 16 7221.0 17 6479.0 18 6125.0 19 5771.0 20 5699.5 21 5628.0 22 5368.0 23 5108.0 24 5479.5 25 5851.0 26 6865.5 27 7880.0 28 9449.0 29 11018.0 30 12132.5 31 13247.0 32 16883.0 33 20519.0 34 23698.0 35 26877.0 36 33514.5 37 40152.0 38 41836.5 39 46846.0 40 50171.0 41 60036.5 42 69902.0 43 89053.0 44 108204.0 45 120202.5 46 132201.0 47 135624.5 48 139048.0 49 140860.0 50 142672.0 51 128934.0 52 115196.0 53 101809.0 54 88422.0 55 84739.0 56 81056.0 57 77501.5 58 73947.0 59 70085.5 60 66224.0 61 60840.5 62 55457.0 63 47651.5 64 32637.0 65 25428.0 66 22500.0 67 19572.0 68 16411.0 69 13250.0 70 10617.0 71 7984.0 72 7498.5 73 7013.0 74 5269.5 75 3526.0 76 3164.5 77 2803.0 78 2215.0 79 1627.0 80 1283.5 81 940.0 82 648.0 83 356.0 84 234.0 85 112.0 86 68.5 87 25.0 88 21.5 89 12.5 90 7.0 91 6.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1505693.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.393730582308237 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4410535946965 16.446191678804933 2 10.581853418563124 4.7393434903356 3 3.9354929760043524 2.6439110823962384 4 1.9611203231077017 1.756672006206526 5 1.2392131861926488 1.3875303112820976 6 0.8131517433939652 1.092570063845922 7 0.627340520481478 0.9833946219319071 8 0.4858932420026994 0.8704769882538198 9 0.4140595785885078 0.8345104783141615 >10 4.452145055575632 23.459915664376837 >50 1.4346393890960047 23.139758338709708 >100 0.6045262350697657 18.170264715487843 >500 0.005647000228874573 0.9194118670581595 >1k 0.0026748948452563768 1.156752443135284 >5k 8.91631615085459E-4 1.4295676482222535 >10k+ 2.9721053836181965E-4 0.9697286016387276 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14570 0.9676607382779889 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 9406 0.6246957381086317 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 6392 0.42452213034131125 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5681 0.37730134894696327 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3400 0.22580964379856983 No Hit CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCTT 2491 0.165438771383011 TruSeq Adapter, Index 14 (95% over 23bp) TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2374 0.15766826305229553 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2220 0.14744041448024264 No Hit CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCT 1862 0.1236639872802756 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCT 1612 0.10706033700096898 TruSeq Adapter, Index 15 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17281079210702313 0.0 2 0.0 0.0 0.0 0.4814394434987743 0.0 3 0.0 0.0 0.0 0.8739497361015824 0.0 4 0.0 0.0 0.0 1.186828921964836 0.0 5 0.0 0.0 0.0 2.73289442137275 0.0 6 0.0 0.0 0.0 3.2648753763217337 0.0 7 0.0 0.0 0.0 4.567464948033895 0.0 8 0.0 0.0 0.0 6.164071958892018 0.0 9 0.0 0.0 0.0 7.580695400722458 0.0 10 0.0 0.0 0.0 8.463810351778218 0.0 11 0.0 0.0 0.0 9.259523687763707 0.0 12 0.0 0.0 0.0 9.811362608446743 0.0 13 6.641460111722642E-5 0.0 0.0 10.051252147682163 0.0 14 6.641460111722642E-5 0.0 0.0 10.203806486448432 0.0 15 6.641460111722642E-5 0.0 0.0 10.617835109813223 0.0 16 6.641460111722642E-5 0.0 0.0 11.163497472592354 0.0 17 1.3282920223445284E-4 0.0 0.0 11.819142414821613 0.0 18 1.9924380335167925E-4 0.0 0.0 12.14656639832954 6.641460111722642E-5 19 1.9924380335167925E-4 0.0 0.0 12.56105992390215 6.641460111722642E-5 20 1.9924380335167925E-4 0.0 0.0 13.003248338140644 6.641460111722642E-5 21 1.9924380335167925E-4 0.0 0.0 13.44942162844617 6.641460111722642E-5 22 1.9924380335167925E-4 0.0 0.0 13.915519299086865 6.641460111722642E-5 23 1.9924380335167925E-4 0.0 0.0 14.262469175323256 6.641460111722642E-5 24 1.9924380335167925E-4 0.0 0.0 14.544864059273703 6.641460111722642E-5 25 1.9924380335167925E-4 0.0 0.0 14.813444706191767 6.641460111722642E-5 26 1.9924380335167925E-4 0.0 0.0 15.111513436005879 6.641460111722642E-5 27 1.9924380335167925E-4 0.0 0.0 15.456005972000932 6.641460111722642E-5 28 1.9924380335167925E-4 0.0 0.0 15.79106763463734 6.641460111722642E-5 29 1.9924380335167925E-4 0.0 0.0 16.10454455191065 6.641460111722642E-5 30 1.9924380335167925E-4 0.0 0.0 16.40885625422978 6.641460111722642E-5 31 1.9924380335167925E-4 0.0 0.0 16.696099404061783 6.641460111722642E-5 32 2.656584044689057E-4 0.0 0.0 17.02471885038982 6.641460111722642E-5 33 2.656584044689057E-4 0.0 0.0 17.360511073638516 6.641460111722642E-5 34 3.320730055861321E-4 0.0 0.0 17.76776540768935 6.641460111722642E-5 35 3.320730055861321E-4 0.0 0.0 18.085891347040864 6.641460111722642E-5 36 3.320730055861321E-4 0.0 0.0 18.41550701238566 6.641460111722642E-5 37 3.320730055861321E-4 0.0 0.0 18.784971438400788 6.641460111722642E-5 38 3.984876067033585E-4 0.0 0.0 19.50649966493834 6.641460111722642E-5 39 3.984876067033585E-4 0.0 0.0 19.890973790805962 6.641460111722642E-5 40 3.984876067033585E-4 0.0 0.0 20.24728812579988 6.641460111722642E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAC 35 1.0198528E-7 46.000004 34 TGACGTT 20 6.312081E-4 46.0 14 CCGCTTA 20 6.312081E-4 46.0 10 CCGTATG 25 3.4176646E-5 46.0 30 CTAACGG 125 0.0 46.0 1 ACGATAA 20 6.312081E-4 46.0 41 CCCGTAG 25 3.4176646E-5 46.0 25 GGTATCG 30 1.8617902E-6 46.0 7 GCGATCG 20 6.312081E-4 46.0 8 ACGTCGT 45 3.110472E-10 46.0 17 CACCGTA 25 3.4176646E-5 46.0 28 CGATATC 40 5.6134013E-9 46.0 9 CCGCAAT 20 6.312081E-4 46.0 32 TACGTTC 25 3.4176646E-5 46.0 18 GTACGTT 20 6.312081E-4 46.0 37 ATCGACG 20 6.312081E-4 46.0 14 TACCGTT 30 1.8617902E-6 46.0 23 CTTACGA 25 3.4176646E-5 46.0 25 TCACGAC 260 0.0 45.999996 24 TACGGGA 650 0.0 43.523075 3 >>END_MODULE