##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933064.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2692719 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50878684333568 33.0 31.0 34.0 31.0 34.0 2 32.88117735270557 34.0 31.0 34.0 31.0 34.0 3 32.93408372726601 34.0 31.0 34.0 31.0 34.0 4 36.390841747690715 37.0 37.0 37.0 35.0 37.0 5 36.37149624598779 37.0 37.0 37.0 35.0 37.0 6 36.4916227797999 37.0 37.0 37.0 35.0 37.0 7 36.524362920898916 37.0 37.0 37.0 35.0 37.0 8 36.378178339440545 37.0 37.0 37.0 35.0 37.0 9 38.06190805650348 39.0 39.0 39.0 35.0 39.0 10 37.97046702608033 39.0 38.0 39.0 35.0 39.0 11 37.6842615215327 39.0 37.0 39.0 35.0 39.0 12 37.59320968879411 39.0 37.0 39.0 35.0 39.0 13 37.50392744285609 39.0 37.0 39.0 35.0 39.0 14 39.01255979550781 41.0 38.0 41.0 35.0 41.0 15 39.06315103803999 41.0 38.0 41.0 35.0 41.0 16 39.04228996787262 41.0 38.0 41.0 35.0 41.0 17 39.02137133507061 41.0 38.0 41.0 35.0 41.0 18 38.89668435510723 40.0 38.0 41.0 35.0 41.0 19 38.751698933308674 40.0 37.0 41.0 35.0 41.0 20 38.57873212912302 40.0 36.0 41.0 35.0 41.0 21 38.52696735158774 40.0 36.0 41.0 35.0 41.0 22 38.473899801650305 40.0 36.0 41.0 35.0 41.0 23 38.40407446896613 40.0 36.0 41.0 35.0 41.0 24 38.33416632036243 40.0 35.0 41.0 35.0 41.0 25 38.269491543677596 40.0 35.0 41.0 35.0 41.0 26 38.154212897818155 40.0 35.0 41.0 34.0 41.0 27 38.06236001602841 40.0 35.0 41.0 34.0 41.0 28 38.0403759174277 40.0 35.0 41.0 34.0 41.0 29 37.99472874815382 40.0 35.0 41.0 34.0 41.0 30 37.886519536572514 40.0 35.0 41.0 34.0 41.0 31 37.78245260645467 40.0 35.0 41.0 34.0 41.0 32 37.60680078389167 40.0 35.0 41.0 34.0 41.0 33 37.33621406466846 40.0 35.0 41.0 33.0 41.0 34 37.13198443654908 40.0 35.0 41.0 33.0 41.0 35 36.97054018633211 40.0 35.0 41.0 32.0 41.0 36 36.86497068576409 40.0 35.0 41.0 32.0 41.0 37 36.725584065771436 39.0 35.0 41.0 32.0 41.0 38 36.69405719646201 39.0 35.0 41.0 32.0 41.0 39 36.59281677739118 39.0 35.0 41.0 31.0 41.0 40 36.52771306623528 39.0 35.0 41.0 31.0 41.0 41 36.46670112997309 39.0 35.0 41.0 31.0 41.0 42 36.39600307347332 39.0 35.0 41.0 31.0 41.0 43 36.2892782351222 39.0 35.0 41.0 31.0 41.0 44 36.17921402121796 39.0 35.0 41.0 31.0 41.0 45 36.09815840420036 38.0 35.0 41.0 31.0 41.0 46 36.012897001135286 38.0 35.0 41.0 31.0 41.0 47 35.88140203266661 38.0 35.0 41.0 31.0 41.0 48 35.792646391992626 37.0 35.0 41.0 30.0 41.0 49 35.7147236677871 37.0 35.0 40.0 30.0 41.0 50 35.59383507896665 37.0 35.0 40.0 30.0 41.0 51 35.46714974715149 37.0 35.0 40.0 29.0 41.0 52 35.18304694994168 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 2.0 11 3.0 12 9.0 13 13.0 14 32.0 15 61.0 16 106.0 17 222.0 18 490.0 19 923.0 20 1703.0 21 2999.0 22 4650.0 23 7297.0 24 11798.0 25 19953.0 26 28513.0 27 32291.0 28 32561.0 29 32127.0 30 34070.0 31 39971.0 32 49213.0 33 65399.0 34 147001.0 35 247321.0 36 203857.0 37 245912.0 38 377935.0 39 1094264.0 40 12019.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.48652421585765 20.506632886684425 22.585089643590734 23.421753253867188 2 31.36662236200658 23.152880044297234 24.80619032286696 20.674307270829225 3 27.038283608501295 23.95968535892531 28.841182462782044 20.16084856979135 4 23.634623590504617 26.533366459701142 26.488319055943084 23.34369089385116 5 22.339687134082688 36.51732691008605 24.024638293115622 17.118347662715642 6 84.54673510306868 2.990694535894759 10.149777975347595 2.3127923856889634 7 85.54227158496673 2.202272127169601 9.026192484251048 3.229263803612631 8 78.9065253374006 4.640996702589464 12.251853981050381 4.200623978959557 9 38.213419224211655 29.244603688687903 17.058742482969816 15.483234604130619 10 30.865901714958007 21.22237782702168 28.450759251150977 19.46096120686934 11 28.072071389550857 19.445252178188664 32.706160575982864 19.776515856277612 12 22.74217993039749 21.972326113493462 34.95916209600779 20.326331860101256 13 18.85172570921808 26.514686456329084 34.33737423028545 20.296213604167388 14 18.1727837178703 25.050478716865744 36.585473642069594 20.191263923194363 15 21.288704837006758 21.096817009127207 36.7058723914378 20.908605762428238 16 21.678608128066834 23.16372410192077 30.745540102773443 24.412127667238952 17 22.18437943209076 25.88810789391689 30.959821652389273 20.96769102160307 18 23.620585735087843 29.067125088061545 27.680422650859597 19.631866525991015 19 23.402924701760565 26.19222429076335 27.38934140547157 23.015509602004517 20 24.40585148320341 26.70416036727189 29.27847280016964 19.61151534935506 21 21.06432197344023 24.113953219775254 29.50166727385962 25.3200575329249 22 20.267580835579206 28.28096804753857 28.480506135248422 22.970944981633806 23 19.646090067326 28.216460759551964 30.785165477719733 21.352283695402306 24 24.56301604437745 25.572478970141333 28.15952945702838 21.704975528452838 25 20.60686614533488 26.444162944592435 28.10694320499094 24.84202770508174 26 19.393482944191355 24.899144693523535 31.957066444734856 23.75030591755025 27 21.628472930149787 24.903564018376965 31.799047728337044 21.668915323136208 28 21.385818572231265 27.30310886505424 28.5225825643151 22.788489998399385 29 23.873081446671563 24.50404219675354 29.86401477465714 21.758861581917756 30 26.645929263320827 23.879506179441673 27.761010339363295 21.7135542178742 31 26.229807120609316 25.567651136267838 26.347717678673487 21.854824064449353 32 26.418686836613848 23.98204194347795 26.364949331883498 23.234321888024706 33 22.076495913609996 24.753344110544028 29.509354670873567 23.66080530497241 34 22.30180720676758 25.20831174734534 29.2153395879778 23.274541457909272 35 27.573021915766184 25.590304818289617 26.867304015012333 19.969369250931866 36 23.805046126238942 27.448686624931902 26.914988158808995 21.83127909002016 37 23.865542598392185 27.897155254595816 28.475492615456723 19.76180953155528 38 22.274362828055956 26.139415215624055 26.652353996090937 24.933867960229048 39 24.846112795282387 25.227994454675738 29.59948661557333 20.32640613446854 40 20.996695162027677 24.94638319111649 31.157094371896953 22.89982727495888 41 21.781181029286753 28.154738760338528 27.388598661798724 22.675481548575995 42 21.636717384918366 24.8657212282455 28.499037589885912 24.99852379695022 43 23.18920020989936 25.58425145735593 30.011672216818763 21.214876115925946 44 23.509471281630205 25.921531359194926 28.134239034968 22.43475832420687 45 23.632283947935154 25.69027811665458 28.201345925809562 22.476092009600706 46 24.77740900554421 25.05887172036889 28.226896308155435 21.936822965931462 47 22.042738213679183 27.24877716538562 28.498740492416776 22.209744128518423 48 21.944398951394483 26.17818643534658 27.931432875097624 23.945981738161315 49 20.866009412790564 24.933607999943554 30.966580619812166 23.233801967453715 50 21.094663052475955 25.721101979077655 30.875445971154065 22.30878899729233 51 20.833625788654516 24.206016298024412 29.850645388545928 25.109712524775148 52 20.71842624499623 23.817301396840886 30.077776403701982 25.3864959544609 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3073.0 1 3745.5 2 4418.0 3 33910.5 4 63403.0 5 37791.5 6 12180.0 7 13029.0 8 13878.0 9 16367.0 10 18856.0 11 21011.5 12 23167.0 13 23555.5 14 22426.0 15 20908.0 16 18739.5 17 16571.0 18 15070.0 19 13569.0 20 13331.5 21 13094.0 22 13266.0 23 13438.0 24 12741.0 25 12044.0 26 12949.5 27 13855.0 28 16667.5 29 19480.0 30 22593.0 31 25706.0 32 29177.0 33 32648.0 34 37397.0 35 42146.0 36 48908.0 37 55670.0 38 59302.5 39 69515.5 40 76096.0 41 84578.5 42 93061.0 43 108769.0 44 124477.0 45 147041.0 46 169605.0 47 187791.0 48 205977.0 49 231540.5 50 257104.0 51 243780.0 52 230456.0 53 203035.5 54 175615.0 55 163559.0 56 151503.0 57 144192.0 58 136881.0 59 133314.5 60 129748.0 61 122976.0 62 116204.0 63 105375.0 64 81749.5 65 68953.0 66 60746.0 67 52539.0 68 44841.5 69 37144.0 70 30900.5 71 24657.0 72 21232.5 73 17808.0 74 15097.5 75 12387.0 76 9748.0 77 7109.0 78 5137.0 79 3165.0 80 2350.0 81 1535.0 82 1151.0 83 767.0 84 505.0 85 243.0 86 166.0 87 89.0 88 52.0 89 17.5 90 20.0 91 14.5 92 9.0 93 8.5 94 8.0 95 8.0 96 8.0 97 7.5 98 7.0 99 3.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2692719.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.425773834778457 #Duplication Level Percentage of deduplicated Percentage of total 1 74.27519696036343 15.914035716063712 2 9.40375247547474 4.029653474755196 3 3.7136215240405446 2.38701644646174 4 1.9075261060804154 1.634808917312584 5 1.1949652936493795 1.2801528061070617 6 0.8503467380000087 1.0931602133717877 7 0.6351732635658429 0.9526355083741914 8 0.48111520426400184 0.8246612444026994 9 0.39402711562063 0.7598102277651949 >10 5.044845266536604 25.943811642989022 >50 1.5792335114738079 23.98307287911124 >100 0.5095306063818041 14.434087993376139 >500 0.004720987423248089 0.6769236904962794 >1k 0.004546136037201863 1.8997995057145844 >5k 6.994055441849021E-4 0.8697471026931 >10k+ 6.994055441849021E-4 3.316622631005347 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50173 1.8632839148830607 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 16667 0.6189654397655306 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 11449 0.4251836155202232 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 10241 0.3803218976803744 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC 6676 0.24792783799572105 No Hit CGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTGC 5685 0.2111248890062424 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT 5488 0.20380886382871735 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT 5367 0.19931526460800403 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4738 0.17595597609702313 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4493 0.16685736610466967 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT 3148 0.11690785410583132 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10205298064892772 0.0 2 3.713718364225899E-5 0.0 0.0 0.2957976677105929 0.0 3 3.713718364225899E-5 0.0 0.0 0.6858495075052391 0.0 4 3.713718364225899E-5 0.0 0.0 0.965863872167872 0.0 5 3.713718364225899E-5 0.0 0.0 2.42156719657714 0.0 6 3.713718364225899E-5 0.0 0.0 3.2702261171700426 0.0 7 3.713718364225899E-5 0.0 0.0 4.839792046626477 0.0 8 3.713718364225899E-5 0.0 0.0 6.386704294061133 0.0 9 3.713718364225899E-5 0.0 0.0 7.97769837847915 0.0 10 3.713718364225899E-5 0.0 0.0 8.853838814967325 0.0 11 3.713718364225899E-5 0.0 0.0 9.463854193475072 0.0 12 3.713718364225899E-5 0.0 0.0 9.95655320885692 0.0 13 3.713718364225899E-5 0.0 0.0 10.238387295518026 0.0 14 7.427436728451799E-5 0.0 0.0 10.38117976662251 0.0 15 7.427436728451799E-5 0.0 0.0 10.669438586053724 0.0 16 7.427436728451799E-5 0.0 0.0 11.017562545516261 0.0 17 7.427436728451799E-5 0.0 0.0 11.45336739555817 0.0 18 7.427436728451799E-5 0.0 0.0 11.68187248650899 0.0 19 7.427436728451799E-5 0.0 0.0 11.944395237676119 0.0 20 7.427436728451799E-5 0.0 0.0 12.24100992342684 0.0 21 2.9709746913807194E-4 0.0 0.0 12.556787395936968 0.0 22 2.9709746913807194E-4 0.0 0.0 12.88938801263704 0.0 23 2.9709746913807194E-4 0.0 0.0 13.143183525648238 0.0 24 2.9709746913807194E-4 0.0 0.0 13.343761454500079 0.0 25 2.9709746913807194E-4 0.0 0.0 13.548795845388991 0.0 26 2.9709746913807194E-4 0.0 0.0 13.776669604217894 0.0 27 2.9709746913807194E-4 0.0 0.0 14.016761496465097 0.0 28 2.9709746913807194E-4 0.0 0.0 14.26275820091142 0.0 29 2.9709746913807194E-4 0.0 0.0 14.52628365603689 0.0 30 2.9709746913807194E-4 0.0 0.0 14.761807674696097 0.0 31 2.9709746913807194E-4 0.0 0.0 14.987304653771893 0.0 32 3.3423465278033097E-4 0.0 0.0 15.243959729923546 0.0 33 3.3423465278033097E-4 0.0 0.0 15.499797788035067 0.0 34 3.3423465278033097E-4 0.0 0.0 15.820663054704186 0.0 35 3.3423465278033097E-4 0.0 0.0 16.065954152661305 0.0 36 3.3423465278033097E-4 0.0 0.0 16.330630860479687 0.0 37 3.3423465278033097E-4 0.0 0.0 16.64989922825219 0.0 38 3.3423465278033097E-4 0.0 0.0 17.20562004427495 0.0 39 3.3423465278033097E-4 0.0 0.0 17.54460825656149 0.0 40 3.3423465278033097E-4 0.0 0.0 17.887755833415962 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15500 0.0 43.90774 1 CGCACTT 6770 0.0 41.583458 34 CCGCACT 6830 0.0 41.319183 33 CACTTAC 6850 0.0 41.164963 36 ACCCGCA 6940 0.0 41.028816 31 ACTTACT 6875 0.0 40.948364 37 GCACTTA 6875 0.0 40.948364 35 TATGACC 7180 0.0 40.938717 27 CCCGCAC 6990 0.0 40.932762 32 TACGGGA 1125 0.0 40.88889 3 TTATGAC 7340 0.0 40.57902 26 CTTATGA 7325 0.0 40.567917 25 CAACGCA 7475 0.0 40.553844 16 CGTAGGG 1140 0.0 40.55263 2 CGCAAGC 7465 0.0 40.546547 19 ATCAACG 7495 0.0 40.507004 14 AACGCAA 7490 0.0 40.441925 17 TCAACGC 7520 0.0 40.43351 15 CTTACTG 6990 0.0 40.406296 38 GGACTTA 7890 0.0 40.37389 7 >>END_MODULE