##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933062.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1070272 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.4119952684925 33.0 31.0 34.0 31.0 34.0 2 32.786115118399806 34.0 31.0 34.0 31.0 34.0 3 32.830777596723074 34.0 31.0 34.0 31.0 34.0 4 36.291684730610534 37.0 37.0 37.0 35.0 37.0 5 36.16878513125636 37.0 35.0 37.0 35.0 37.0 6 36.26244263140585 37.0 37.0 37.0 35.0 37.0 7 36.52005378072116 37.0 37.0 37.0 35.0 37.0 8 36.4817868728697 37.0 37.0 37.0 35.0 37.0 9 38.304279659750044 39.0 39.0 39.0 37.0 39.0 10 37.96744285564791 39.0 38.0 39.0 35.0 39.0 11 37.6604685537882 39.0 37.0 39.0 35.0 39.0 12 37.32998994648089 39.0 37.0 39.0 35.0 39.0 13 37.25552476379836 39.0 37.0 39.0 34.0 39.0 14 38.07704396639359 40.0 37.0 41.0 33.0 41.0 15 38.38270738653352 40.0 37.0 41.0 33.0 41.0 16 38.598374992525265 41.0 37.0 41.0 34.0 41.0 17 38.6717787627818 41.0 37.0 41.0 35.0 41.0 18 38.67929834658853 40.0 37.0 41.0 35.0 41.0 19 38.644046560126775 40.0 37.0 41.0 35.0 41.0 20 38.50813718381869 40.0 36.0 41.0 34.0 41.0 21 38.46351861956587 40.0 36.0 41.0 35.0 41.0 22 38.41748172427196 40.0 36.0 41.0 35.0 41.0 23 38.40570995036776 40.0 36.0 41.0 35.0 41.0 24 38.36720758835137 40.0 35.0 41.0 34.0 41.0 25 38.20943647969862 40.0 35.0 41.0 34.0 41.0 26 38.118534353883874 40.0 35.0 41.0 34.0 41.0 27 38.04524550768403 40.0 35.0 41.0 34.0 41.0 28 38.01226604078216 40.0 35.0 41.0 34.0 41.0 29 37.98635954224721 40.0 35.0 41.0 34.0 41.0 30 37.93811199396041 40.0 35.0 41.0 34.0 41.0 31 37.80189241613347 40.0 35.0 41.0 34.0 41.0 32 37.726716199246546 40.0 35.0 41.0 34.0 41.0 33 37.621144905220355 40.0 35.0 41.0 34.0 41.0 34 37.48317997667883 40.0 35.0 41.0 33.0 41.0 35 37.4406113586079 40.0 35.0 41.0 33.0 41.0 36 37.369443468576215 40.0 35.0 41.0 33.0 41.0 37 37.23143929767386 40.0 35.0 41.0 33.0 41.0 38 37.24145544310232 40.0 35.0 41.0 33.0 41.0 39 37.20244479907911 40.0 35.0 41.0 33.0 41.0 40 37.119505135143214 40.0 35.0 41.0 33.0 41.0 41 37.00082408957723 40.0 35.0 41.0 33.0 41.0 42 37.04569399180769 40.0 35.0 41.0 33.0 41.0 43 36.99810982628715 39.0 35.0 41.0 33.0 41.0 44 36.963386877354544 39.0 35.0 41.0 32.0 41.0 45 36.89008121300006 39.0 35.0 41.0 32.0 41.0 46 36.808318819888775 39.0 35.0 41.0 32.0 41.0 47 36.70117035669438 39.0 35.0 41.0 32.0 41.0 48 36.59065265652096 39.0 35.0 41.0 32.0 41.0 49 36.49861904263589 39.0 35.0 41.0 32.0 41.0 50 36.3186993586677 38.0 35.0 40.0 31.0 41.0 51 36.19099163577109 38.0 35.0 40.0 31.0 41.0 52 35.94635195539078 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 1.0 13 2.0 14 6.0 15 9.0 16 41.0 17 79.0 18 162.0 19 318.0 20 553.0 21 857.0 22 1364.0 23 2198.0 24 3547.0 25 5478.0 26 7276.0 27 8567.0 28 9690.0 29 11222.0 30 13589.0 31 16871.0 32 21778.0 33 30038.0 34 70864.0 35 112262.0 36 68316.0 37 76046.0 38 123752.0 39 482415.0 40 2969.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.90447661902769 23.491037792262155 27.19803937690606 11.406446211804102 2 34.95634754529689 23.66734811337679 27.70379866052742 13.6725056807989 3 31.068924535071456 24.58907642169467 30.45590279854093 13.886096244692938 4 27.841146923398913 28.48574941697064 29.36048032649644 14.312623333134006 5 23.97474660647013 33.37488040423369 27.993631525444002 14.65674146385218 6 25.010184326974827 40.832517341386115 24.64616471326915 9.511133618369911 7 89.72195853016804 1.2161394486635173 6.923753961609759 2.138148059558692 8 87.73162336303295 1.5606313161514083 7.091468337020869 3.6162769837947737 9 83.00123706870777 3.748486366082641 9.271474914788017 3.9788016504215746 10 44.7538569634635 32.080816839083894 13.467417628415953 9.697908569036656 11 27.472922771033904 23.56186091012378 33.78813983734975 15.177076481492554 12 29.148571578066136 19.702094420857502 32.956482090533996 18.19285191054237 13 26.82505008072714 23.574007355139628 34.44031050050828 15.160632063624949 14 16.250728786700954 26.64219936614244 36.9337887938767 20.173283053279913 15 12.674254768881182 31.664287209232793 38.85619730311547 16.80526071877056 16 23.98184760509478 28.94451130179992 32.18144546433056 14.89219562877474 17 21.18807181725767 27.662874484243254 28.210025115110927 22.93902858338815 18 19.440385247862228 26.697138671291036 35.16694821503319 18.69552786581355 19 19.891485528912277 29.815972014590685 28.61908000956766 21.673462446929378 20 16.27632975542666 38.477601955390774 27.600460443700293 17.64560784548227 21 19.95829097649943 31.57234796388208 33.65527641571489 14.814084643903605 22 17.99000627877773 26.45570471805298 34.18121748490103 21.37307151826825 23 17.0861239012139 28.733910632063626 33.414403067631405 20.765562399091074 24 18.182293846797823 31.06331848352568 31.534320247563237 19.220067422113257 25 20.637464121270106 29.072422711236023 30.200453716438435 20.089659451055432 26 16.717058841117023 33.035714285714285 26.862704060276265 23.384522812892424 27 21.207786431860313 29.95425461938647 29.533146714106323 19.304812234646892 28 16.136085032589847 31.832842492375768 28.21553773246427 23.81553474257011 29 20.120399300364767 30.306781827423308 27.252978682054657 22.31984019015727 30 25.47137550080727 28.62814312623333 25.490809812832627 20.40967156012677 31 22.579213508341805 29.108862046283562 27.84983630329486 20.46208814207977 32 27.12787029839144 27.8613287089637 23.310336064103332 21.70046492854153 33 26.39413158524188 27.86160901154099 25.990869610715784 19.753389792501345 34 18.532952370986067 27.80237173354063 30.577927853853975 23.086748041619327 35 20.850587514201997 31.24121718591162 26.011612001435147 21.896583298451237 36 26.2988287089637 28.300656281767626 24.29447841296418 21.10603659630449 37 18.32141735932548 32.84267924415475 27.658856813968786 21.17704658255098 38 20.75005232314776 29.622469802069006 28.597683579501286 21.02979429528195 39 19.032544997907074 31.356234676792443 27.21560500508282 22.395615320217665 40 24.64364199007355 28.40362076182503 28.583855319021705 18.368881929079713 41 18.210324104526702 26.351432159301563 27.85516205226335 27.58308168390839 42 18.068023829456436 27.863197392812296 31.344181665969025 22.724597111762243 43 18.460914608622854 28.670655683788794 31.297744872331517 21.57068483525683 44 22.58724884889075 27.77135158165401 26.883539885188064 22.757859684267174 45 19.374327273814508 29.209210368952938 24.672700023919152 26.743762333313402 46 22.58463269150272 28.321118369909705 26.53736620223644 22.556882736351135 47 17.95870582431382 27.762942504335346 30.977639329067753 23.300712342283084 48 18.076713209352388 30.482624977575796 29.67843688333433 21.762224929737485 49 22.748516265024218 27.2468120253543 28.872193236859417 21.132478472762063 50 20.35146205824314 27.038360342043894 28.633562309394243 23.976615290318723 51 18.604429528194704 28.2115200621898 26.713115918196493 26.470934491419 52 19.080476738623453 28.822205943909584 29.303859205884113 22.79345811158285 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 720.0 1 1118.0 2 1516.0 3 8504.5 4 15493.0 5 8729.5 6 1966.0 7 2541.5 8 3117.0 9 4723.0 10 6329.0 11 8099.0 12 9869.0 13 10289.5 14 9857.0 15 9004.0 16 8108.5 17 7213.0 18 6244.0 19 5275.0 20 5213.0 21 5151.0 22 5391.5 23 5632.0 24 6665.5 25 7699.0 26 10005.5 27 12312.0 28 13281.0 29 14250.0 30 16382.0 31 18514.0 32 21165.0 33 23816.0 34 27520.0 35 31224.0 36 32877.0 37 34530.0 38 37427.5 39 42553.0 40 44781.0 41 50412.5 42 56044.0 43 58821.0 44 61598.0 45 64640.5 46 67683.0 47 76613.0 48 85543.0 49 101014.5 50 116486.0 51 110135.5 52 103785.0 53 95336.0 54 86887.0 55 73893.5 56 60900.0 57 51267.0 58 41634.0 59 41856.5 60 42079.0 61 29093.0 62 16107.0 63 12694.0 64 7321.5 65 5362.0 66 4587.0 67 3812.0 68 2801.0 69 1790.0 70 1189.0 71 588.0 72 509.0 73 430.0 74 322.5 75 215.0 76 280.5 77 346.0 78 275.0 79 204.0 80 120.0 81 36.0 82 23.0 83 10.0 84 5.5 85 1.0 86 1.0 87 1.0 88 0.5 89 1.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1070272.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.60727623446755 #Duplication Level Percentage of deduplicated Percentage of total 1 68.04416349177544 14.702490367100637 2 13.062150213516702 5.644749757591294 3 5.611476029101303 3.637461379316548 4 3.0014487846087152 2.5941253197058964 5 1.7574030859122753 1.8986346966306122 6 1.077971046684773 1.3975210907085602 7 0.7475144456755728 1.1306225781876893 8 0.5976986697905977 1.03317122105114 9 0.4586851412625434 0.8919842896714993 >10 3.7921753213557237 17.252738879440095 >50 0.9469664800840754 14.800138696681712 >100 0.8889182139014087 28.821697115748098 >500 0.007364332181444421 0.997515007770015 >1k 0.004765156117405213 1.640091767490495 >5k 4.331960106732012E-4 0.7686584633393415 >10k+ 8.663920213464024E-4 2.7883993695663647 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 15745 1.471121359803863 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14045 1.3122832326735634 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 8212 0.7672815882317766 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 2425 0.2265779166417509 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCTT 2364 0.220878430903546 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 2154 0.20125725049333254 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1804 0.16855528314297674 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 1724 0.1610805477486097 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1424 0.1330502900197333 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGGCAGACTTCG 1247 0.11651243795969622 No Hit GGGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 1195 0.11165385995335765 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 1163 0.10866396579561083 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2286334688752018 0.0 2 0.0 0.0 0.0 0.7488750523231478 0.0 3 0.0 0.0 0.0 1.1470915804580517 0.0 4 0.0 0.0 0.0 1.6422928003348682 0.0 5 9.3434192429588E-5 0.0 0.0 3.1260277761167257 0.0 6 9.3434192429588E-5 0.0 0.0 4.5145533098128325 0.0 7 9.3434192429588E-5 0.0 0.0 5.668839323087963 0.0 8 9.3434192429588E-5 0.0 0.0 7.83520450876039 0.0 9 9.3434192429588E-5 0.0 0.0 8.929505770495725 0.0 10 9.3434192429588E-5 0.0 0.0 10.195632512109071 0.0 11 9.3434192429588E-5 0.0 0.0 12.149715212581475 0.0 12 9.3434192429588E-5 0.0 0.0 13.280829546134067 0.0 13 9.3434192429588E-5 0.0 0.0 13.735573760688872 0.0 14 9.3434192429588E-5 0.0 0.0 13.968224899838546 0.0 15 9.3434192429588E-5 0.0 0.0 14.266934013035938 0.0 16 9.3434192429588E-5 0.0 0.0 14.822587155414698 0.0 17 9.3434192429588E-5 0.0 0.0 15.527080966333791 0.0 18 9.3434192429588E-5 0.0 0.0 16.280721162470847 0.0 19 1.86868384859176E-4 0.0 0.0 16.729579022902588 0.0 20 1.86868384859176E-4 0.0 0.0 17.275234706691382 0.0 21 2.8030257728876395E-4 0.0 0.0 17.814910602164684 0.0 22 2.8030257728876395E-4 0.0 0.0 18.417748011720384 0.0 23 2.8030257728876395E-4 0.0 0.0 19.014045027806016 0.0 24 2.8030257728876395E-4 0.0 0.0 19.409084793398314 0.0 25 2.8030257728876395E-4 0.0 0.0 19.832341685104346 0.0 26 2.8030257728876395E-4 0.0 0.0 20.202995126472523 0.0 27 4.6717096214794E-4 0.0 0.0 20.697635741194762 0.0 28 5.606051545775279E-4 0.0 0.0 21.07389523410871 0.0 29 5.606051545775279E-4 0.0 0.0 21.571992913950847 0.0 30 5.606051545775279E-4 0.0 0.0 22.76383947258267 0.0 31 5.606051545775279E-4 0.0 0.0 23.306598696406148 0.0 32 5.606051545775279E-4 0.0 0.0 23.660807719906714 0.0 33 6.54039347007116E-4 0.0 0.0 24.078271691682115 0.0 34 6.54039347007116E-4 0.0 0.0 24.551329007953118 0.0 35 6.54039347007116E-4 0.0 0.0 25.0457827542905 0.0 36 6.54039347007116E-4 0.0 0.0 25.427367996172936 0.0 37 6.54039347007116E-4 0.0 0.0 25.853427913651856 0.0 38 6.54039347007116E-4 0.0 0.0 26.359467499850506 0.0 39 6.54039347007116E-4 0.0 0.0 27.883285744184654 0.0 40 6.54039347007116E-4 0.0 0.0 28.30644920169826 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAT 20 6.3112576E-4 46.000004 46 CGGCGAT 20 6.3112576E-4 46.000004 19 GTCGCGC 20 6.3112576E-4 46.000004 10 ACCGGTA 20 6.3112576E-4 46.000004 27 TACCCGT 40 5.6115823E-9 46.000004 12 GCGACTA 40 5.6115823E-9 46.000004 33 CCCTCGC 20 6.3112576E-4 46.000004 37 TCCGCAT 20 6.3112576E-4 46.000004 25 GGTCGCG 20 6.3112576E-4 46.000004 9 CGAGTAC 20 6.3112576E-4 46.000004 12 CCGATAT 20 6.3112576E-4 46.000004 11 CGGCCGT 20 6.3112576E-4 46.000004 21 GCGAAAC 20 6.3112576E-4 46.000004 46 CCGGCTA 20 6.3112576E-4 46.000004 43 GACGTTC 20 6.3112576E-4 46.000004 19 TTTCGCA 20 6.3112576E-4 46.000004 36 CGCATTA 20 6.3112576E-4 46.000004 39 CGGTTCT 20 6.3112576E-4 46.000004 32 CGGTTCG 20 6.3112576E-4 46.000004 30 GACCGTA 20 6.3112576E-4 46.000004 8 >>END_MODULE