##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933060.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 955324 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43102968207645 33.0 31.0 34.0 31.0 34.0 2 32.80736273766806 34.0 31.0 34.0 31.0 34.0 3 32.86408380821585 34.0 31.0 34.0 31.0 34.0 4 36.30877377727347 37.0 37.0 37.0 35.0 37.0 5 36.15541428876486 37.0 35.0 37.0 35.0 37.0 6 36.25480255913177 37.0 37.0 37.0 35.0 37.0 7 36.48630935682554 37.0 37.0 37.0 35.0 37.0 8 36.43199479967006 37.0 37.0 37.0 35.0 37.0 9 38.264289392918 39.0 39.0 39.0 37.0 39.0 10 37.98139584057346 39.0 38.0 39.0 35.0 39.0 11 37.62164773417186 39.0 37.0 39.0 35.0 39.0 12 37.104382387546 39.0 35.0 39.0 35.0 39.0 13 36.94526568996487 39.0 35.0 39.0 33.0 39.0 14 37.51908671822335 40.0 35.0 41.0 31.0 41.0 15 37.91469386302448 40.0 35.0 41.0 33.0 41.0 16 38.218218112389096 40.0 35.0 41.0 33.0 41.0 17 38.295367854256774 40.0 35.0 41.0 34.0 41.0 18 38.26982782804577 40.0 36.0 41.0 35.0 41.0 19 38.206947590555664 40.0 35.0 41.0 35.0 41.0 20 37.99149817234781 40.0 35.0 41.0 33.0 41.0 21 37.95202360665073 40.0 35.0 41.0 34.0 41.0 22 37.933533544640355 40.0 35.0 41.0 34.0 41.0 23 37.923856199572086 40.0 35.0 41.0 34.0 41.0 24 37.87399772223874 40.0 35.0 41.0 34.0 41.0 25 37.71338833735989 40.0 35.0 41.0 34.0 41.0 26 37.61474536387655 39.0 35.0 41.0 34.0 41.0 27 37.49546436601614 39.0 35.0 41.0 34.0 41.0 28 37.470714647596 39.0 35.0 41.0 34.0 41.0 29 37.42260426829013 39.0 35.0 41.0 34.0 41.0 30 37.36260577563214 39.0 35.0 41.0 34.0 41.0 31 37.198934602292 39.0 35.0 41.0 33.0 41.0 32 37.08395685652198 39.0 35.0 41.0 33.0 41.0 33 36.965677613040185 39.0 35.0 41.0 33.0 41.0 34 36.773215160510986 39.0 35.0 41.0 32.0 41.0 35 36.72582390895654 39.0 35.0 41.0 32.0 41.0 36 36.62388781188372 39.0 35.0 41.0 32.0 41.0 37 36.50851020177448 39.0 35.0 41.0 32.0 41.0 38 36.478935942151566 39.0 35.0 41.0 32.0 41.0 39 36.42190188878328 39.0 35.0 41.0 32.0 41.0 40 36.33686267695567 38.0 35.0 41.0 31.0 41.0 41 36.15748897756154 38.0 35.0 41.0 31.0 41.0 42 36.24887472731764 38.0 35.0 41.0 31.0 41.0 43 36.2080299458613 38.0 35.0 41.0 31.0 41.0 44 36.16814923523328 38.0 35.0 41.0 31.0 41.0 45 36.10122743697426 38.0 35.0 41.0 31.0 41.0 46 36.031637434001446 38.0 35.0 41.0 31.0 41.0 47 35.927841235015556 37.0 35.0 41.0 31.0 41.0 48 35.806401807135586 37.0 35.0 40.0 31.0 41.0 49 35.764222399939705 37.0 35.0 40.0 31.0 41.0 50 35.63272669795797 37.0 35.0 40.0 30.0 41.0 51 35.526169132147835 36.0 35.0 40.0 30.0 41.0 52 35.20936457160084 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 1.0 13 4.0 14 13.0 15 24.0 16 65.0 17 132.0 18 251.0 19 416.0 20 728.0 21 1144.0 22 1919.0 23 3056.0 24 4660.0 25 6948.0 26 8426.0 27 9890.0 28 10630.0 29 11982.0 30 14103.0 31 16992.0 32 21225.0 33 30231.0 34 84426.0 35 119488.0 36 58426.0 37 70648.0 38 114072.0 39 363868.0 40 1552.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.97557268528792 22.34163487989415 25.297595370785196 13.385197064032726 2 36.915119896495845 23.662129288073995 25.715359396393268 13.707391419036894 3 34.13260841348066 21.887338745807703 30.45772952422424 13.522323316487391 4 30.92176057546968 26.835921634963633 28.59699955198446 13.645318237582224 5 24.849684504942825 31.095314259874137 29.074638551946773 14.980362683236265 6 27.53568422859679 37.14854855525455 25.74833250289954 9.567434713249117 7 85.8101544606856 1.8965293450180252 9.514573066310488 2.7787431279858983 8 83.6180185989256 2.127864473204902 9.92281152781674 4.331305400052757 9 78.00725198990081 3.7929540135074595 12.832400316541822 5.36739368004991 10 53.59145169596912 15.061801022480331 18.211727120851144 13.135020160699407 11 35.003935837475034 24.663046254464454 24.979483400396095 15.353534507664415 12 34.58386892823796 17.74193886053318 30.448832019293974 17.225360191934882 13 29.967634017359558 21.214373343493936 33.46613295593956 15.351859683206953 14 17.824109935477388 23.000887656962455 39.76431032822372 19.410692079336435 15 13.90847503046087 28.318455309402886 39.99711092781088 17.775958732325368 16 28.830114181157384 24.135685903421248 31.36391423223953 15.670285683181831 17 26.110931997939968 24.02305395865696 26.466204135978998 23.39980990742408 18 23.362231033659782 23.100853741767192 34.629089188589425 18.907826035983604 19 23.874413288057244 25.59602815379913 27.46952866252706 23.060029895616566 20 18.083603049855338 36.36870841724902 27.164919964326238 18.382768568569407 21 23.03480285222605 27.59398905502217 33.29226524194932 16.07894285080245 22 20.611959921450733 22.606152467644485 35.73321721217095 21.048670398733833 23 20.189590128584648 24.599402925080916 33.77712692238445 21.43388002394999 24 22.635880601764427 27.86625270588826 29.41054553219641 20.0873211601509 25 24.761860897454685 24.183732430044678 31.132369750995476 19.922036921505164 26 18.832144905812058 29.616025557821217 26.78954993279767 24.762279603569052 27 23.537773572107472 26.00248711431933 31.414787025134927 19.044952288438267 28 18.41239202616076 28.898258601270356 26.94447119511286 25.744878177456027 29 24.249992672642996 28.53408895830106 25.630048025591318 21.585870343464624 30 28.337192408020734 23.627167327524486 25.687620116316555 22.34802014813822 31 25.760474980216134 25.500877189309595 28.899200690027676 19.83944714044659 32 30.811326837805815 24.037394643073974 23.598590635219047 21.55268788390117 33 29.242644380335886 23.383480368963827 27.814961206878504 19.558914043821783 34 20.41202775184126 23.801139718043302 35.03649023786694 20.750342292248494 35 24.109726124330592 28.775473033232707 27.059196670448976 20.055604171987724 36 28.113184636835253 24.64242497833196 25.59110835695534 21.653282027877452 37 20.489383706470264 30.143176555807244 28.26810589915045 21.099333838572047 38 23.91670260560815 25.999870201104546 30.066029954235425 20.01739723905188 39 20.439662355389377 26.42077452257035 28.118837169379184 25.02072595266109 40 27.489312526430826 23.083686791078208 29.945965975941146 19.481034706549817 41 19.6325016434215 25.26022585007809 26.67252157383254 28.434750932667868 42 19.983168014202512 25.685945291859095 30.7292604393902 23.601626254548194 43 20.239939538837085 26.192579690241217 31.66485925193966 21.90262151898204 44 25.108758913206408 24.24444481662766 27.61858803924114 23.028208230924797 45 20.611645891864956 24.233872487239932 26.63735026022585 28.51713136066926 46 24.16614677324133 23.33491045969744 28.421247660479587 24.077695106581643 47 19.391012891961264 24.16154100598331 31.911477153300872 24.535968948754558 48 19.534943118774365 28.99822468607509 28.411931449434956 23.05490074571559 49 25.35213184218129 23.86007260364023 29.670876058803085 21.11691949537539 50 22.128304114624985 24.29762049315206 29.292261054888186 24.28181433733477 51 20.683244637421442 25.412320846121318 26.958393173415512 26.94604134304173 52 20.72302171828615 27.17884194262889 28.97624261507091 23.12189372401405 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 904.0 1 2253.5 2 3603.0 3 8989.5 4 14376.0 5 8451.0 6 2526.0 7 2975.5 8 3425.0 9 4408.0 10 5391.0 11 6468.5 12 7546.0 13 7832.0 14 7785.5 15 7453.0 16 6709.0 17 5965.0 18 5410.5 19 4856.0 20 4558.5 21 4261.0 22 4062.0 23 3863.0 24 4263.5 25 4664.0 26 4901.5 27 5139.0 28 6327.0 29 7515.0 30 8231.5 31 8948.0 32 10547.5 33 12147.0 34 13806.0 35 15465.0 36 16844.0 37 18223.0 38 19975.5 39 24286.0 40 26844.0 41 31378.5 42 35913.0 43 40601.0 44 45289.0 45 53957.5 46 62626.0 47 76188.0 48 89750.0 49 96183.0 50 102616.0 51 94014.0 52 85412.0 53 77192.0 54 68972.0 55 63715.5 56 58459.0 57 56537.5 58 54616.0 59 58292.5 60 61969.0 61 45138.0 62 28307.0 63 23570.5 64 16824.0 65 14814.0 66 12817.5 67 10821.0 68 9617.0 69 8413.0 70 6866.0 71 5319.0 72 4577.0 73 3835.0 74 3222.5 75 2610.0 76 2276.5 77 1943.0 78 1442.5 79 942.0 80 660.5 81 379.0 82 337.0 83 295.0 84 219.5 85 144.0 86 101.0 87 58.0 88 35.5 89 10.5 90 8.0 91 6.0 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 955324.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.658001078056333 #Duplication Level Percentage of deduplicated Percentage of total 1 70.50733701417434 14.565406440496947 2 11.728476810929791 4.845737732082927 3 5.072933537358501 3.1438999945098014 4 2.6030045927928147 2.150914867363982 5 1.5574486304929738 1.6086887743870606 6 0.9926945921522197 1.2304251572916747 7 0.7100014478696005 1.0267047472858235 8 0.5144187957245399 0.8501491229319988 9 0.4410386611176451 0.8199879423149552 >10 3.7284544298339024 16.410171006003726 >50 1.158046493634164 17.375692680485873 >100 0.9708874643591594 28.349770136205816 >500 0.007120180461512956 1.14329941861579 >1k 0.006611596142833459 2.276827945306266 >5k 5.085843186794968E-4 0.9350638509171597 >10k+ 0.0010171686373589936 3.267260183800205 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 19184 2.0081145244964014 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11914 1.2471161616373083 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 8900 0.9316211044629884 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCTT 2499 0.2615866449497762 TruSeq Adapter, Index 27 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 2387 0.24986287374754532 Illumina Single End Adapter 1 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 2216 0.231963187358425 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 2091 0.2188786212845066 Illumina Single End Adapter 1 (95% over 21bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGGAGTTACTCG 1913 0.20024619919524686 No Hit GGGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCT 1764 0.18464939643513614 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1533 0.16046911833053498 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGGAGTTACT 1378 0.1442442563988762 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1346 0.1408946074839531 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1343 0.14058057789817904 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG 1089 0.1139927396359769 No Hit CGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1072 0.112213238649924 TruSeq Adapter, Index 27 (95% over 22bp) CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1040 0.1088635897350009 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 992 0.10383911636261624 No Hit GGGGTTGGGGATTTAGCTCAGTGGCTGTCTCTTATACACATCTGACGCGGAG 980 0.10258299801952009 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 973 0.10185026231938066 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG 964 0.10090817356205853 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2715309151659542 0.0 2 0.0 0.0 0.0 0.9137214180738681 0.0 3 0.0 0.0 0.0 1.38246291310592 0.0 4 0.0 0.0 0.0 1.921233005765583 0.0 5 0.0 0.0 0.0 3.5428817867027314 0.0 6 0.0 0.0 0.0 4.963342279687311 0.0 7 0.0 0.0 0.0 6.153200380185152 0.0 8 0.0 0.0 0.0 8.265363374101351 0.0 9 0.0 0.0 0.0 9.382889993342573 0.0 10 0.0 0.0 0.0 10.533913101733024 0.0 11 0.0 0.0 0.0 12.361879320523718 0.0 12 0.0 0.0 0.0 13.357457783956018 0.0 13 0.0 0.0 0.0 13.80369382534093 0.0 14 0.0 0.0 0.0 14.021630357868116 0.0 15 0.0 0.0 0.0 14.315248020566845 0.0 16 0.0 0.0 0.0 14.866265267071695 0.0 17 0.0 0.0 0.0 15.447848059925219 0.0 18 0.0 0.0 0.0 16.14666856480105 0.0 19 0.0 0.0 0.0 16.540252312304517 0.0 20 0.0 0.0 0.0 17.08153464165037 0.0 21 1.0467652859134702E-4 0.0 0.0 17.59507769091952 0.0 22 1.0467652859134702E-4 0.0 0.0 18.101398059715866 0.0 23 1.0467652859134702E-4 0.0 0.0 18.55307728058753 0.0 24 3.1402958577404105E-4 0.0 0.0 18.88343640482182 0.0 25 3.1402958577404105E-4 0.0 0.0 19.293454367314126 0.0 26 3.1402958577404105E-4 0.0 0.0 19.6300940832639 0.0 27 3.1402958577404105E-4 0.0 0.0 20.16404905560836 0.0 28 3.1402958577404105E-4 0.0 0.0 20.53418526070736 0.0 29 3.1402958577404105E-4 0.0 0.0 21.030142653173165 0.0 30 3.1402958577404105E-4 0.0 0.0 22.28573761362637 0.0 31 3.1402958577404105E-4 0.0 0.0 22.74160389564169 0.0 32 3.1402958577404105E-4 0.0 0.0 23.046317270371098 0.0 33 3.1402958577404105E-4 0.0 0.0 23.456439909391996 0.0 34 4.1870611436538806E-4 0.0 0.0 23.92894975945334 0.0 35 4.1870611436538806E-4 0.0 0.0 24.34639975547563 0.0 36 4.1870611436538806E-4 0.0 0.0 24.613324903383564 0.0 37 4.1870611436538806E-4 0.0 0.0 25.00701332741562 0.0 38 4.1870611436538806E-4 0.0 0.0 25.472614526589933 0.0 39 4.1870611436538806E-4 0.0 0.0 27.179365325271846 0.0 40 4.1870611436538806E-4 0.0 0.0 27.532125226624686 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 20 6.3109177E-4 46.0 44 CTTCGAT 20 6.3109177E-4 46.0 31 AGCGTCG 20 6.3109177E-4 46.0 36 TACCCGG 20 6.3109177E-4 46.0 40 CGAACGT 25 3.4167206E-5 46.0 38 CATATCC 20 6.3109177E-4 46.0 18 CTCGTGA 20 6.3109177E-4 46.0 13 CGTATCT 25 3.4167206E-5 46.0 34 ATTAGCG 25 3.4167206E-5 46.0 1 GTCGACA 25 3.4167206E-5 46.0 21 ACGTTCG 25 3.4167206E-5 46.0 41 CCGATAA 40 5.6097633E-9 46.0 12 TAGACGT 20 6.3109177E-4 46.0 19 TTAGACG 25 3.4167206E-5 46.0 18 ATGTGAG 135 0.0 46.0 1 CGTTGCC 20 6.3109177E-4 46.0 41 CGCATAT 20 6.3109177E-4 46.0 36 CGCATAC 20 6.3109177E-4 46.0 12 GAATCGC 30 1.8610699E-6 46.0 9 ACCGAAT 20 6.3109177E-4 46.0 43 >>END_MODULE