##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933058.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1792384 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.48045619688638 33.0 31.0 34.0 31.0 34.0 2 32.865767603370706 34.0 31.0 34.0 31.0 34.0 3 32.89773898896665 34.0 31.0 34.0 31.0 34.0 4 36.36861130204242 37.0 37.0 37.0 35.0 37.0 5 36.299657327894025 37.0 37.0 37.0 35.0 37.0 6 36.38515965328858 37.0 37.0 37.0 35.0 37.0 7 36.51895966489324 37.0 37.0 37.0 35.0 37.0 8 36.45252914554024 37.0 37.0 37.0 35.0 37.0 9 38.261106437013495 39.0 39.0 39.0 37.0 39.0 10 37.98726277404842 39.0 38.0 39.0 35.0 39.0 11 37.67962947671928 39.0 37.0 39.0 35.0 39.0 12 37.26352109815754 39.0 35.0 39.0 35.0 39.0 13 37.188173962722274 39.0 35.0 39.0 34.0 39.0 14 38.242109949653646 40.0 37.0 41.0 33.0 41.0 15 38.38448122723702 40.0 36.0 41.0 33.0 41.0 16 38.5028353299293 41.0 37.0 41.0 35.0 41.0 17 38.50296197689781 40.0 36.0 41.0 35.0 41.0 18 38.381899191244734 40.0 36.0 41.0 35.0 41.0 19 38.29592263711348 40.0 36.0 41.0 35.0 41.0 20 38.117068663857744 40.0 35.0 41.0 34.0 41.0 21 38.06900362868671 40.0 35.0 41.0 34.0 41.0 22 38.004965453831325 40.0 35.0 41.0 34.0 41.0 23 37.986204407091336 40.0 35.0 41.0 34.0 41.0 24 37.94140876062272 40.0 35.0 41.0 34.0 41.0 25 37.8396543374634 40.0 35.0 41.0 34.0 41.0 26 37.72713771156181 40.0 35.0 41.0 34.0 41.0 27 37.640654569556524 40.0 35.0 41.0 34.0 41.0 28 37.599232642112405 40.0 35.0 41.0 34.0 41.0 29 37.54109777815468 40.0 35.0 41.0 34.0 41.0 30 37.469765407412694 40.0 35.0 41.0 34.0 41.0 31 37.29988774726844 40.0 35.0 41.0 33.0 41.0 32 37.116093984324785 40.0 35.0 41.0 33.0 41.0 33 36.90742106602157 40.0 35.0 41.0 33.0 41.0 34 36.68628653235021 39.0 35.0 41.0 32.0 41.0 35 36.527929840926944 39.0 35.0 41.0 31.0 41.0 36 36.42887740573448 39.0 35.0 41.0 31.0 41.0 37 36.328883765978716 39.0 35.0 41.0 31.0 41.0 38 36.27809554202671 39.0 35.0 41.0 31.0 41.0 39 36.24572468845962 39.0 35.0 41.0 31.0 41.0 40 36.16638845247447 39.0 35.0 41.0 31.0 41.0 41 36.04422378240377 39.0 35.0 41.0 30.0 41.0 42 36.0573320226023 39.0 35.0 41.0 30.0 41.0 43 36.01845251910305 39.0 35.0 41.0 30.0 41.0 44 35.97154515996572 38.0 35.0 41.0 30.0 41.0 45 35.90961479236592 38.0 35.0 41.0 30.0 41.0 46 35.845505204241945 38.0 35.0 41.0 30.0 41.0 47 35.7582169892166 38.0 35.0 41.0 30.0 41.0 48 35.66845664768264 38.0 35.0 41.0 30.0 41.0 49 35.63156276779976 37.0 35.0 41.0 29.0 41.0 50 35.526070864279085 37.0 35.0 40.0 29.0 41.0 51 35.44674634453332 37.0 35.0 40.0 29.0 41.0 52 35.20527074555452 37.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 3.0 12 6.0 13 3.0 14 19.0 15 47.0 16 119.0 17 221.0 18 494.0 19 880.0 20 1475.0 21 2399.0 22 3860.0 23 5967.0 24 9665.0 25 15854.0 26 21841.0 27 23998.0 28 24152.0 29 24097.0 30 25968.0 31 30469.0 32 37115.0 33 51238.0 34 125600.0 35 207962.0 36 106851.0 37 131614.0 38 216270.0 39 720267.0 40 3926.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.73811861743912 21.794604281225453 24.411900574876814 16.055376526458616 2 39.08241760694137 22.727886435049633 24.720651378276084 13.469044579732914 3 32.05217185603085 23.278159144469043 30.992521691780333 13.677147307719775 4 28.624948671713202 26.52433853459973 30.353038188245375 14.497674605441691 5 26.11449332285939 30.448051310433478 28.48334955009641 14.954105816610728 6 28.640793490680565 36.91608494608298 25.597862957937583 8.845258605298865 7 85.19474621509676 1.820592015996572 10.763541741055487 2.2211200278511747 8 83.49717471256159 2.218218863814897 11.282515353852746 3.0020910697707635 9 76.98495411697493 4.258462472327358 13.849320234949653 4.907263175748054 10 45.87694377990431 24.078155127472684 18.183436138684566 11.861464953938441 11 32.55050257087767 22.66015541312576 29.513764907519818 15.275577108476753 12 32.10807505534528 17.758304024137686 31.670724576876385 18.462896343640647 13 30.886071288295362 18.62597523744912 33.82004079482968 16.667912679425836 14 20.54336570734843 19.403487199171607 37.97300132114547 22.0801457723345 15 17.52648985931586 25.519866278654575 38.27327179890024 18.68037206312933 16 28.83812843676355 23.816659822895094 30.917091426837107 16.428120313504248 17 27.461916642862246 22.854366028708135 29.796684192673002 19.887033135756624 18 23.27470006427194 23.1433108083982 34.31329447261301 19.268694654716846 19 23.415015978718845 25.294133399985718 29.642810915518105 21.648039705777332 20 20.218881668213953 32.59535903020781 28.907365832321645 18.27839346925659 21 25.288554238377493 25.089768710276367 33.15963543526387 16.462041616082267 22 21.874442083839178 22.007337713347138 35.90329973934157 20.214920463472115 23 21.815860886952795 22.97671704277655 35.526315789473685 19.68110628079697 24 22.51331187959723 25.46301462186674 32.22724594729701 19.79642755123902 25 25.197446529315148 24.284584106977075 30.75295249232307 19.765016871384702 26 20.719555630936227 26.538788563165035 28.529377633364277 24.212278172534457 27 22.675777065628793 23.440735913732773 32.64741260801257 21.236074412625864 28 19.09261631436121 27.168731700349923 29.36067271299007 24.377979272298795 29 21.586836302935087 27.959187317003497 28.036402913661355 22.417573466400057 30 25.198897111333284 24.152134810397772 28.425995768763833 22.222972309505106 31 22.28010292437335 24.698781064771836 31.092444476183672 21.928671534671142 32 24.97020727701207 25.497940173534246 27.21950207098479 22.3123504784689 33 24.48069163750625 24.64282207384132 28.983856137970438 21.892630150681995 34 19.748614136256517 25.443989680782693 32.55200894451189 22.255387238448904 35 20.097479111618938 28.461646611440404 28.57607521602514 22.86479906091552 36 23.42762488395344 27.037454027708346 26.18294963579233 23.351971452545882 37 20.254253552810113 29.01364886095837 26.960182639434404 23.771914946797114 38 21.99188343569235 26.02890898378919 29.028879972148825 22.950327608369637 39 21.049841998143254 26.405613975576664 26.17753784903235 26.36700617724773 40 25.110969524387635 24.028723755623798 28.54388345354567 22.316423266442907 41 20.24560585231736 24.789498232521602 27.361101192601584 27.60379472255945 42 19.094680604156252 26.191429961436835 29.937613814896807 24.776275619510105 43 19.685123277154894 25.557971952438763 30.32871304363351 24.428191726772834 44 22.58567360565593 25.02996009783618 28.623107548382485 23.761258748125403 45 20.532095800899807 23.646774351924588 27.974530011426125 27.84659983574948 46 22.319938138256088 24.36732307362708 28.61061022638006 24.70212856173677 47 19.158283046490038 23.959374776833535 31.841279547239875 25.04106262943655 48 20.04018112190245 26.209394861815326 29.826476915660933 23.923947100621294 49 23.02614841462544 24.47232289509391 29.779054041991003 22.722474648289655 50 21.40718729915018 24.676241251874597 29.757351103335 24.15922034564022 51 20.58693895950868 24.986386845675927 28.560397771906022 25.86627642290938 52 20.82583865957295 25.258761515389562 29.106486110119263 24.808913714918233 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1034.0 1 3402.5 2 5771.0 3 24437.0 4 43103.0 5 25860.0 6 8617.0 7 8665.5 8 8714.0 9 9932.0 10 11150.0 11 12069.5 12 12989.0 13 13375.5 14 13403.0 15 13044.0 16 12347.5 17 11651.0 18 10971.5 19 10292.0 20 9864.5 21 9437.0 22 9321.0 23 9205.0 24 9943.0 25 10681.0 26 12078.0 27 13475.0 28 15726.5 29 17978.0 30 19931.5 31 21885.0 32 23989.0 33 26093.0 34 30813.5 35 35534.0 36 37535.5 37 39537.0 38 42715.0 39 50277.5 40 54662.0 41 57756.0 42 60850.0 43 65698.0 44 70546.0 45 84098.5 46 97651.0 47 112555.0 48 127459.0 49 143783.5 50 160108.0 51 158574.0 52 157040.0 53 142049.5 54 127059.0 55 120114.0 56 113169.0 57 105777.0 58 98385.0 59 101328.5 60 104272.0 61 88310.5 62 72349.0 63 62024.5 64 45921.5 65 40143.0 66 34363.5 67 28584.0 68 24489.5 69 20395.0 70 16749.5 71 13104.0 72 10890.5 73 8677.0 74 7933.5 75 7190.0 76 5718.5 77 4247.0 78 3490.0 79 2733.0 80 2014.0 81 1295.0 82 890.0 83 485.0 84 375.0 85 265.0 86 175.5 87 86.0 88 52.5 89 40.0 90 61.0 91 32.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1792384.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.39451704791467 #Duplication Level Percentage of deduplicated Percentage of total 1 72.36350408867234 16.92909230049288 2 9.955835909259823 4.658239458108399 3 3.948583132670755 2.771255862371228 4 2.1335528769572094 1.996537566104113 5 1.3401050220327129 1.5675554891970183 6 0.9027802088778224 1.2672064192267307 7 0.716698964367796 1.1736778298087633 8 0.5697409190774478 1.066305091540154 9 0.4599989495002988 0.968530793949682 >10 6.126316085259284 34.12919109662222 >50 1.2413327405894639 20.09814378533924 >100 0.23050602384689242 6.941987930079918 >500 0.005522539444061011 0.9559465141299236 >1k 0.004562097801615618 1.7211868104039834 >5k 2.4011041061134828E-4 0.3365866442981844 >10k+ 7.203312318340449E-4 3.418556408327588 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33213 1.8530069449403699 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 17128 0.9555988002570878 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 10517 0.5867604263372134 No Hit GGGGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCT 5992 0.33430336356495033 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTC 2379 0.13272825465971577 No Hit CGCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGC 2180 0.12162572305934442 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCTGCTT 2163 0.12067726558594585 TruSeq Adapter, Index 13 (95% over 23bp) CGTTCTGTCTCTTATACACATCTGACGCACAATCCCTCGTATGCCGTCTTCT 2104 0.11738556023709204 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1948 0.10868206812825823 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12631221881025495 0.0 2 5.579161608226809E-5 0.0 0.0 0.31522263086481467 0.0 3 5.579161608226809E-5 0.0 0.0 0.5621005320288509 0.0 4 5.579161608226809E-5 0.0 0.0 0.827222291651789 0.0 5 5.579161608226809E-5 0.0 0.0 1.8423507462686568 0.0 6 5.579161608226809E-5 0.0 0.0 2.904790491323288 0.0 7 5.579161608226809E-5 0.0 0.0 3.6706977969006642 0.0 8 5.579161608226809E-5 0.0 0.0 5.044120009997858 0.0 9 5.579161608226809E-5 0.0 0.0 6.042008855245305 0.0 10 5.579161608226809E-5 0.0 0.0 7.0599268906662855 0.0 11 5.579161608226809E-5 0.0 0.0 8.131516460758409 0.0 12 5.579161608226809E-5 0.0 0.0 8.792647111333286 0.0 13 5.579161608226809E-5 0.0 0.0 9.164386649289439 0.0 14 5.579161608226809E-5 0.0 0.0 9.76436968863815 0.0 15 5.579161608226809E-5 0.0 0.0 10.066648664571877 0.0 16 5.579161608226809E-5 0.0 0.0 10.378914339784332 0.0 17 5.579161608226809E-5 0.0 0.0 10.715728326072984 0.0 18 5.579161608226809E-5 0.0 0.0 11.131152699421552 0.0 19 5.579161608226809E-5 0.0 0.0 11.409218113975577 0.0 20 5.579161608226809E-5 0.0 0.0 11.796132971506106 0.0 21 5.579161608226809E-5 0.0 0.0 12.143491573234307 0.0 22 5.579161608226809E-5 0.0 0.0 12.528118974505464 0.0 23 1.1158323216453618E-4 0.0 0.0 12.877374491180461 0.0 24 1.1158323216453618E-4 0.0 0.0 13.16096327572663 0.0 25 1.1158323216453618E-4 0.0 0.0 13.462516960651289 0.0 26 1.1158323216453618E-4 0.0 0.0 13.724570181389701 0.0 27 1.1158323216453618E-4 0.0 0.0 14.071705616653574 0.0 28 1.1158323216453618E-4 0.0 0.0 14.38079116974934 0.0 29 1.6737484824680426E-4 0.0 0.0 14.742041883882026 0.0 30 1.6737484824680426E-4 0.0 0.0 15.659088677426265 0.0 31 1.6737484824680426E-4 0.0 0.0 16.068654931086197 0.0 32 1.6737484824680426E-4 0.0 0.0 16.439613386417196 0.0 33 1.6737484824680426E-4 0.0 0.0 16.836124401913874 0.0 34 1.6737484824680426E-4 0.0 0.0 17.212271477540526 0.0 35 1.6737484824680426E-4 0.0 0.0 17.577762354495466 0.0 36 1.6737484824680426E-4 0.0 0.0 17.863248053988432 0.0 37 1.6737484824680426E-4 0.0 0.0 18.225224059130188 0.0 38 1.6737484824680426E-4 0.0 0.0 18.610911501106905 0.0 39 1.6737484824680426E-4 0.0 0.0 19.827782439477254 0.0 40 1.6737484824680426E-4 0.0 0.0 20.284883150039278 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 55 1.8189894E-12 46.000004 1 TTACGCG 30 1.8619903E-6 46.0 1 ACGTATA 25 3.4179262E-5 46.0 36 CGTTTTT 9955 0.0 44.428932 1 GGCGATA 80 0.0 43.125004 8 GTACGCG 65 0.0 42.46154 1 CCATACG 175 0.0 42.057144 2 CATACGA 835 0.0 41.868263 18 CGTTAGG 220 0.0 41.818184 2 TAGGGAT 1625 0.0 40.338463 5 GCGAGAC 1015 0.0 40.334976 21 CGACCAA 985 0.0 40.162434 29 ACGACCA 995 0.0 39.527637 28 ACATACG 885 0.0 39.502827 17 GGGCGAT 1095 0.0 39.488586 7 GCAAGGC 2105 0.0 39.44418 46 TACGAAA 895 0.0 39.318436 20 CGAATAT 240 0.0 39.291668 14 ACAACGA 335 0.0 39.134327 13 ACACGAC 1005 0.0 39.134327 26 >>END_MODULE