##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933057.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1068142 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.465913708102484 33.0 31.0 34.0 31.0 34.0 2 32.850165989166236 34.0 31.0 34.0 31.0 34.0 3 32.884239174192196 34.0 31.0 34.0 31.0 34.0 4 36.34067006072226 37.0 37.0 37.0 35.0 37.0 5 36.259436479419406 37.0 37.0 37.0 35.0 37.0 6 36.35121921991645 37.0 37.0 37.0 35.0 37.0 7 36.51563275294858 37.0 37.0 37.0 35.0 37.0 8 36.45600678561465 37.0 37.0 37.0 35.0 37.0 9 38.26920016252521 39.0 39.0 39.0 37.0 39.0 10 37.96631627630034 39.0 38.0 39.0 35.0 39.0 11 37.68745447702646 39.0 37.0 39.0 35.0 39.0 12 37.30560824309877 39.0 37.0 39.0 35.0 39.0 13 37.21692902254569 39.0 37.0 39.0 34.0 39.0 14 38.245905506945704 40.0 37.0 41.0 33.0 41.0 15 38.434140779035 40.0 37.0 41.0 33.0 41.0 16 38.55710851178963 41.0 37.0 41.0 35.0 41.0 17 38.540154773429 40.0 37.0 41.0 35.0 41.0 18 38.480908905370256 40.0 37.0 41.0 35.0 41.0 19 38.41888531674628 40.0 36.0 41.0 35.0 41.0 20 38.28102349687588 40.0 35.0 41.0 34.0 41.0 21 38.22172894615135 40.0 35.0 41.0 34.0 41.0 22 38.15456371905608 40.0 35.0 41.0 34.0 41.0 23 38.122653167837235 40.0 35.0 41.0 34.0 41.0 24 38.057403416399694 40.0 35.0 41.0 34.0 41.0 25 37.931716007796716 40.0 35.0 41.0 34.0 41.0 26 37.81320648378212 40.0 35.0 41.0 34.0 41.0 27 37.71153273628413 40.0 35.0 41.0 34.0 41.0 28 37.6840953730871 40.0 35.0 41.0 34.0 41.0 29 37.62900063849189 40.0 35.0 41.0 34.0 41.0 30 37.54863023830165 40.0 35.0 41.0 34.0 41.0 31 37.42115280552586 40.0 35.0 41.0 33.0 41.0 32 37.300753083391534 40.0 35.0 41.0 33.0 41.0 33 37.13445309706013 40.0 35.0 41.0 33.0 41.0 34 36.952722578084185 40.0 35.0 41.0 33.0 41.0 35 36.861432281475686 39.0 35.0 41.0 32.0 41.0 36 36.74492436398906 39.0 35.0 41.0 32.0 41.0 37 36.64643933110017 39.0 35.0 41.0 32.0 41.0 38 36.60070196659246 39.0 35.0 41.0 32.0 41.0 39 36.56711092719882 39.0 35.0 41.0 32.0 41.0 40 36.52451921186509 39.0 35.0 41.0 31.0 41.0 41 36.3993111402791 39.0 35.0 41.0 31.0 41.0 42 36.408029082275576 39.0 35.0 41.0 31.0 41.0 43 36.36318485744405 39.0 35.0 41.0 31.0 41.0 44 36.31505736128717 39.0 35.0 41.0 31.0 41.0 45 36.235942412151196 38.0 35.0 41.0 31.0 41.0 46 36.17125906480599 38.0 35.0 41.0 31.0 41.0 47 36.06409260191997 38.0 35.0 41.0 31.0 41.0 48 35.96370520024491 38.0 35.0 41.0 31.0 41.0 49 35.92068189435487 38.0 35.0 41.0 31.0 41.0 50 35.8083194931011 37.0 35.0 40.0 31.0 41.0 51 35.71780062950432 37.0 35.0 40.0 30.0 41.0 52 35.4557877136186 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 2.0 13 5.0 14 9.0 15 27.0 16 63.0 17 136.0 18 258.0 19 494.0 20 821.0 21 1345.0 22 2141.0 23 3185.0 24 5061.0 25 7754.0 26 10485.0 27 11810.0 28 12425.0 29 13065.0 30 14460.0 31 17241.0 32 21356.0 33 30167.0 34 72636.0 35 119807.0 36 71841.0 37 83083.0 38 129207.0 39 436603.0 40 2652.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.91537080275844 22.90060684815315 25.15452065362096 14.029501695467456 2 37.96424070956858 23.227810534554393 25.311990353342534 13.495958402534495 3 33.79719175914813 23.315813815017105 29.09360365943854 13.793390766396227 4 29.270546425475263 26.745133137728878 29.622746788348365 14.36157364844749 5 25.860232066522993 31.16083816571205 27.779733406232506 15.199196361532454 6 28.07969352389476 37.66989782257415 24.90240061714641 9.348008036384675 7 86.39347577382034 2.070979326718732 9.249893740719866 2.285651158741066 8 84.61112848291707 2.3180438555922342 9.684761014921236 3.3860666465694633 9 78.19559571667438 4.524866543961383 12.340400433650208 4.939137305714034 10 45.907566596950595 24.534378387892247 17.715996562254833 11.842058452902329 11 32.78431144922679 24.56452419247628 27.53922231313814 15.111942045158791 12 31.657494977259574 19.670043870571515 29.80362161585257 18.868839536316333 13 29.146031145671643 22.21399401952175 32.4864109828094 16.15356385199721 14 19.172825335957207 22.938335914138758 37.12493282728326 20.763905922620776 15 18.00050929558055 27.960889095270105 36.410701947868354 17.627899661280992 16 28.23454184930468 25.685910674797917 30.17510780401857 15.904439671878833 17 25.379677982889916 25.208258827009892 28.221903080302056 21.190160109798136 18 22.815505803535487 25.32940376841281 32.183455008790965 19.671635419260735 19 22.879448612637646 27.77215014483093 27.77701841140972 21.571382831121706 20 20.352162914668646 34.89938603668801 26.874235822577898 17.87421522606545 21 24.346482022053248 27.921287619061886 31.5561039637052 16.176126395179665 22 21.272171677548492 24.17824596355166 33.15008678621382 21.39949557268603 23 21.35081290689815 25.730005935540408 32.61317315488015 20.306008002681292 24 22.0378938380852 28.960007190055254 29.622372306303845 19.3797266655557 25 24.18489301984193 26.592531704586094 29.591383917119636 19.63119135845234 26 19.95717797820889 30.03065135534414 26.73183902514834 23.28033164129863 27 23.136156054157595 26.39723931836778 29.976164217866163 20.49044040960846 28 19.11000597298861 29.951916505483357 26.785951680581793 24.152125840946244 29 22.42482741058773 28.63121195496479 26.23162463417785 22.71233600026963 30 25.648743331879093 25.849559328254106 27.488948098661037 21.012749241205757 31 23.08887769603667 25.871560148369788 29.729942273592837 21.309619882000707 32 25.687595843998267 26.25718303371649 25.69087256188784 22.364348560397403 33 23.86021708724121 26.086044739369857 28.703206128024178 21.350532045364755 34 19.400323178004424 27.4958760164847 31.550393112526237 21.553407692984642 35 20.813712034542224 30.347369544498765 27.234393928897095 21.604524492061916 36 23.484611596585474 29.156142160873742 25.17006165846863 22.189184584072155 37 20.298892843835368 29.853614968796283 27.477526396303116 22.369965791065233 38 21.59666036912695 27.872511332762873 28.518024757007964 22.012803541102212 39 20.25554654718193 29.226263923710516 25.85283604614368 24.665353482963877 40 24.5281058136465 26.29846967912506 28.480763793578006 20.692660713650433 41 19.62969343027425 26.468671768360387 26.879665812223468 27.021968989141893 42 19.483083709843825 27.49278653961739 28.99062109719494 24.033508653343844 43 19.94144973233896 27.695755807748405 29.71823970970152 22.644554750211114 44 22.549529931413616 27.27624229737245 27.07111975748543 23.103108013728512 45 20.325761930529836 26.228441536799412 26.411656877081885 27.034139655588863 46 22.824118890559493 25.969674444034595 27.534447667070484 23.671758998335427 47 19.62978705078538 25.506159293427277 30.669798584832353 24.194255070954984 48 19.702998290489468 28.920312093335905 28.285377786848564 23.091311829326063 49 22.956966395853733 26.20569175259469 28.130248599905254 22.707093251646317 50 21.04289504578979 26.662091744356086 28.567175525351495 23.727837684502624 51 20.74050079483814 26.14848962029393 27.435116304760975 25.675893280106955 52 21.349034117186665 26.606855642789068 28.475146562910176 23.56896367711409 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 706.0 1 1927.5 2 3149.0 3 11536.5 4 19924.0 5 11772.5 6 3621.0 7 4130.5 8 4640.0 9 6139.0 10 7638.0 11 8921.5 12 10205.0 13 10566.5 14 10395.0 15 9862.0 16 9015.5 17 8169.0 18 7300.5 19 6432.0 20 6104.0 21 5776.0 22 5579.0 23 5382.0 24 5871.5 25 6361.0 26 7224.5 27 8088.0 28 9340.5 29 10593.0 30 11324.0 31 12055.0 32 14123.5 33 16192.0 34 17877.5 35 19563.0 36 20804.5 37 22046.0 38 23738.5 39 28670.5 40 31910.0 41 34819.0 42 37728.0 43 44445.0 44 51162.0 45 58683.5 46 66205.0 47 78001.0 48 89797.0 49 97516.5 50 105236.0 51 101161.0 52 97086.0 53 85497.0 54 73908.0 55 68941.5 56 63975.0 57 59225.0 58 54475.0 59 56413.5 60 58352.0 61 46681.5 62 35011.0 63 31349.0 64 22944.0 65 18201.0 66 16166.0 67 14131.0 68 11755.0 69 9379.0 70 7446.5 71 5514.0 72 4705.0 73 3896.0 74 3477.5 75 3059.0 76 2688.5 77 2318.0 78 1680.5 79 1043.0 80 812.5 81 582.0 82 485.5 83 389.0 84 278.5 85 168.0 86 138.0 87 108.0 88 77.0 89 26.0 90 6.0 91 4.5 92 3.0 93 2.5 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1068142.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.91696497811844 #Duplication Level Percentage of deduplicated Percentage of total 1 72.33181886453447 17.299575785866775 2 10.743819124632202 5.1391909147013495 3 4.2848487024011295 3.0744172905559215 4 2.1771345620855636 2.082818042962066 5 1.3364759935077175 1.5982224765410065 6 0.8998818042014751 1.2913464957319631 7 0.7146511381525085 1.196460036993622 8 0.5281465232756194 1.0105329520398403 9 0.4168656998826109 0.8973146110204113 >10 4.743761513093743 27.015173492891336 >50 1.5736848968193546 26.21599281397411 >100 0.23829411297416558 7.583511452981809 >500 0.005111919915287376 0.8742645559238401 >1k 0.004325470697550857 1.4135323015851244 >5k 3.9322460886825975E-4 0.6456353460001251 >10k+ 7.864492177365195E-4 2.6620114302306686 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16333 1.5291038082951518 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 11972 1.1208247592548557 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6865 0.6427048089111747 No Hit GGGGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCT 2337 0.218791134512078 No Hit CTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCTT 1889 0.17684914552559491 TruSeq Adapter, Index 22 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCT 1567 0.1467033409415602 TruSeq Adapter, Index 20 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 1359 0.12723027462640735 TruSeq Adapter, Index 22 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCT 1339 0.1253578644037965 TruSeq Adapter, Index 20 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1241 0.11618305431300334 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGTCAATCCTCG 1139 0.10663376217768798 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCG 1101 0.10307618275472735 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18377706334925506 0.0 2 0.0 0.0 0.0 0.5446841337574967 0.0 3 0.0 0.0 0.0 0.8788157379824031 0.0 4 0.0 0.0 0.0 1.2667791361073715 0.0 5 0.0 0.0 0.0 2.4909609396503463 0.0 6 0.0 0.0 0.0 3.732088055707949 0.0 7 0.0 0.0 0.0 4.723435648069264 0.0 8 0.0 0.0 0.0 6.432946181312971 0.0 9 0.0 0.0 0.0 7.4506947578131 0.0 10 0.0 0.0 0.0 8.468536954824359 0.0 11 0.0 0.0 0.0 9.868912560315014 0.0 12 0.0 0.0 0.0 10.675921366260292 0.0 13 0.0 0.0 0.0 11.075868189809968 0.0 14 0.0 0.0 0.0 11.446137311331265 0.0 15 0.0 0.0 0.0 11.73533107021351 0.0 16 9.362051113054257E-5 0.0 0.0 12.139865298808585 0.0 17 9.362051113054257E-5 0.0 0.0 12.610121126217301 0.0 18 9.362051113054257E-5 0.0 0.0 13.139451496149388 0.0 19 9.362051113054257E-5 0.0 0.0 13.460195367282628 0.0 20 9.362051113054257E-5 0.0 0.0 13.863606149744134 0.0 21 1.8724102226108514E-4 0.0 0.0 14.265706245049815 0.0 22 1.8724102226108514E-4 0.0 0.0 14.68578147849256 0.0 23 1.8724102226108514E-4 0.0 0.0 15.070749020261351 0.0 24 1.8724102226108514E-4 0.0 0.0 15.36406208163334 0.0 25 1.8724102226108514E-4 0.0 0.0 15.700346957614249 0.0 26 1.8724102226108514E-4 0.0 0.0 15.98514055247336 0.0 27 1.8724102226108514E-4 0.0 0.0 16.366082412263538 0.0 28 1.8724102226108514E-4 0.0 0.0 16.68785610901921 0.0 29 1.8724102226108514E-4 0.0 0.0 17.080500532700707 0.0 30 1.8724102226108514E-4 0.0 0.0 18.041515079455728 0.0 31 2.808615333916277E-4 0.0 0.0 18.466833061521783 0.0 32 2.808615333916277E-4 0.0 0.0 18.781866081476057 0.0 33 2.808615333916277E-4 0.0 0.0 19.151667100441703 0.0 34 2.808615333916277E-4 0.0 0.0 19.52568104240822 0.0 35 2.808615333916277E-4 0.0 0.0 19.885558287194026 0.0 36 2.808615333916277E-4 0.0 0.0 20.180743758788626 0.0 37 2.808615333916277E-4 0.0 0.0 20.530416367861203 0.0 38 2.808615333916277E-4 0.0 0.0 20.932610083678014 0.0 39 2.808615333916277E-4 0.0 0.0 22.132544174838177 0.0 40 2.808615333916277E-4 0.0 0.0 22.513205173094963 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 6.3112547E-4 46.0 42 TCGTTAG 45 3.092282E-10 46.0 1 CAAGTCG 20 6.3112547E-4 46.0 1 ACGTTTA 20 6.3112547E-4 46.0 15 ACGTTAG 40 5.6115823E-9 46.0 1 GCGAAAT 20 6.3112547E-4 46.0 30 GCAACGA 45 3.092282E-10 46.0 11 GTCTAGA 25 3.4169927E-5 46.0 9 CGACATA 20 6.3112547E-4 46.0 12 TACGCGA 20 6.3112547E-4 46.0 15 ACTACGG 30 1.8612791E-6 46.0 2 TATAGCG 30 1.8612791E-6 46.0 1 CGCAACG 20 6.3112547E-4 46.0 17 TTCGCAT 45 3.092282E-10 46.0 41 TAAGCGA 20 6.3112547E-4 46.0 38 TGTCGTA 25 3.4169927E-5 46.0 31 CGATAGT 20 6.3112547E-4 46.0 29 TGCGTAT 20 6.3112547E-4 46.0 44 CGTTAGG 140 0.0 44.35714 2 CGTTTTT 4250 0.0 43.456474 1 >>END_MODULE