##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933056.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1327838 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55560542777056 33.0 31.0 34.0 31.0 34.0 2 32.93007505433645 34.0 31.0 34.0 31.0 34.0 3 33.035834943720545 34.0 33.0 34.0 31.0 34.0 4 36.42910430338641 37.0 37.0 37.0 35.0 37.0 5 36.40988659761206 37.0 37.0 37.0 35.0 37.0 6 36.52072240740211 37.0 37.0 37.0 35.0 37.0 7 36.54828073906606 37.0 37.0 37.0 35.0 37.0 8 36.39276553314485 37.0 37.0 37.0 35.0 37.0 9 38.07498279157548 39.0 39.0 39.0 35.0 39.0 10 37.96675196823709 39.0 38.0 39.0 35.0 39.0 11 37.553985501243375 39.0 37.0 39.0 35.0 39.0 12 37.418083380653364 39.0 37.0 39.0 35.0 39.0 13 37.42127202264132 39.0 37.0 39.0 35.0 39.0 14 38.81030743208132 41.0 38.0 41.0 35.0 41.0 15 38.862642882640806 41.0 38.0 41.0 35.0 41.0 16 38.8403547721936 41.0 38.0 41.0 35.0 41.0 17 38.84795735624376 41.0 37.0 41.0 35.0 41.0 18 38.781526059654865 40.0 37.0 41.0 35.0 41.0 19 38.69322010666964 40.0 37.0 41.0 35.0 41.0 20 38.579444179184506 40.0 36.0 41.0 35.0 41.0 21 38.513549845689006 40.0 36.0 41.0 35.0 41.0 22 38.46890885785766 40.0 35.0 41.0 35.0 41.0 23 38.424885415238904 40.0 35.0 41.0 35.0 41.0 24 38.37264109025348 40.0 35.0 41.0 35.0 41.0 25 38.30720238462825 40.0 35.0 41.0 35.0 41.0 26 38.214746829055954 40.0 35.0 41.0 35.0 41.0 27 38.17017964540855 40.0 36.0 41.0 35.0 41.0 28 38.18033148622046 40.0 36.0 41.0 35.0 41.0 29 38.17131909163618 40.0 36.0 41.0 35.0 41.0 30 38.098186676386725 40.0 35.0 41.0 35.0 41.0 31 38.01644251783727 40.0 35.0 41.0 34.0 41.0 32 37.94310676453001 40.0 35.0 41.0 34.0 41.0 33 37.80604862942618 40.0 35.0 41.0 34.0 41.0 34 37.6807185816342 40.0 35.0 41.0 34.0 41.0 35 37.565705304412134 40.0 35.0 41.0 34.0 41.0 36 37.4839159596276 40.0 35.0 41.0 33.0 41.0 37 37.387346950456305 40.0 35.0 41.0 33.0 41.0 38 37.36911656391819 40.0 35.0 41.0 33.0 41.0 39 37.27771234141514 40.0 35.0 41.0 33.0 41.0 40 37.25455138352721 40.0 35.0 41.0 33.0 41.0 41 37.20941410021403 40.0 35.0 41.0 33.0 41.0 42 37.149231306831105 39.0 35.0 41.0 33.0 41.0 43 37.06052394945769 39.0 35.0 41.0 33.0 41.0 44 36.97134590213565 39.0 35.0 41.0 33.0 41.0 45 36.91576984541789 39.0 35.0 41.0 33.0 41.0 46 36.82584095348981 39.0 35.0 41.0 33.0 41.0 47 36.74475952638801 39.0 35.0 41.0 33.0 41.0 48 36.67962432164165 38.0 35.0 41.0 33.0 41.0 49 36.58920289975133 38.0 35.0 41.0 33.0 41.0 50 36.50848597494574 38.0 35.0 41.0 33.0 41.0 51 36.40071906362071 38.0 35.0 41.0 32.0 41.0 52 36.15016816810484 37.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 3.0 14 9.0 15 21.0 16 46.0 17 100.0 18 175.0 19 319.0 20 608.0 21 994.0 22 1632.0 23 2556.0 24 3905.0 25 6121.0 26 8336.0 27 9962.0 28 10630.0 29 11824.0 30 13848.0 31 17016.0 32 21716.0 33 30098.0 34 72164.0 35 171867.0 36 73346.0 37 104746.0 38 168668.0 39 589689.0 40 7436.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.23886196960774 21.52694831749054 24.22170475615248 19.012484956749244 2 27.966589297790843 23.503318928965733 26.78421614684924 21.745875626394184 3 29.067401294435015 24.121541935085457 25.319654957909023 21.49140181257051 4 24.97382963885655 27.890149250134428 23.162991268513178 23.973029842495848 5 22.628664038836064 38.12746735671068 21.260650772157447 17.983217832295807 6 87.54599582177947 3.3204351735678603 6.661354773699804 2.472214230952872 7 89.2652567557187 2.6974676127660153 5.244841614715049 2.792434016800242 8 82.08606772814153 4.7955398173572386 8.662276572895188 4.456115881606039 9 43.55456011953265 26.533055990263872 14.373741375077381 15.538642515126092 10 34.73149586018776 22.989551436244483 24.046834026439974 18.232118677127783 11 32.56617147573725 21.07757120974095 27.84722232681999 18.509034987701813 12 22.764222744039557 29.363597065304653 28.5917408599543 19.280439330701483 13 19.208593216943633 32.90680037775692 28.1230842919091 19.76152211339034 14 17.165874150310508 25.755250263962925 37.28278600250935 19.79608958321723 15 19.854379826454732 19.8901522625501 38.12980197885585 22.125665932139313 16 19.038692973088583 22.114745925331253 28.424777721378664 30.4217833802015 17 21.890697509786587 25.311220194029694 29.891824153247608 22.90625814293611 18 26.017932910490586 28.13001284795284 25.76082323295462 20.091231008601955 19 28.11110993961613 22.243376074491014 26.198150678019456 23.4473633078734 20 24.7393130788545 25.77678903601192 26.978366336857356 22.50553154827622 21 21.912236281835582 23.517251351444983 25.580002982291518 28.99050938442792 22 20.311513904557636 27.9259216862298 25.461238494454896 26.301325914757673 23 20.023451656000205 25.22084772389403 33.93990833219112 20.81579228791464 24 22.68341469365992 24.37066871109277 29.578532923443973 23.36738367180334 25 19.55652722696594 28.996609526162075 26.90546587761459 24.541397369257396 26 19.227270194105003 28.138221680656827 28.92062134085634 23.71388678438183 27 20.807282213643532 25.007192142414965 32.96290661963282 21.22261902430869 28 20.103732533637388 25.83613362473434 29.5758217493399 24.484312092288366 29 21.08449976578468 25.75901578355191 30.74471434015294 22.411770110510467 30 27.59146823633606 26.00513014388803 24.972172810237396 21.431228809538514 31 24.944458586062456 27.343169874638324 25.911971189256523 21.8004003500427 32 24.35959808350115 26.20982378874531 26.297786326344024 23.132791801409507 33 20.348566617313256 25.258276988608554 27.79766808902893 26.59548830504926 34 21.142790009022185 25.78191014265294 28.658616487854694 24.416683360470177 35 25.90150304479914 26.600157549339603 25.59423664633788 21.904102759523376 36 21.205071703024014 29.2806050135634 26.602642792268334 22.911680491144253 37 21.091804873787314 29.129532367653283 27.64772509899551 22.130937659563894 38 19.67800288890663 28.436526142496298 25.5243486027663 26.36112236583077 39 23.026076976257645 24.182618662818808 29.820731143407553 22.97057321751599 40 19.14970049057189 23.161033198326905 31.23498499063892 26.454281320462286 41 21.55097233246827 26.868262544075407 24.885565859690715 26.695199263765613 42 21.315175495805963 24.758743159933665 27.2682360348175 26.65784530944287 43 21.43439184599326 25.86942081790098 30.284417225595288 22.411770110510467 44 20.387426779471593 29.081710268873163 26.68442987774111 23.846433073914135 45 22.253317046205936 27.30114667602524 27.493790658197764 22.951745619571064 46 23.00039613266076 25.48676871726822 27.111741040699243 24.401094109371776 47 21.06002388845627 24.45418793557648 30.44339746264228 24.04239071332497 48 19.87177652695585 25.555301173787765 29.27375176791145 25.299170531344938 49 19.44017267166627 26.762978616367356 30.687629063183913 23.109219648782457 50 19.174854161426317 26.443286003262443 30.17725053809275 24.204609297218486 51 20.4828450458565 22.88200819678304 30.074527163705213 26.56061959365525 52 21.398544099506115 23.77345730427959 29.43363572965979 25.394362866554506 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1398.0 1 1962.5 2 2527.0 3 5559.0 4 8591.0 5 5737.0 6 2883.0 7 3109.5 8 3336.0 9 3318.0 10 3300.0 11 3414.5 12 3529.0 13 3592.0 14 3477.0 15 3299.0 16 3241.5 17 3184.0 18 3295.0 19 3406.0 20 3231.5 21 3057.0 22 3641.5 23 4226.0 24 4763.5 25 5301.0 26 6849.5 27 8398.0 28 10370.5 29 12343.0 30 13392.0 31 14441.0 32 16170.0 33 17899.0 34 23272.5 35 28646.0 36 31241.0 37 33836.0 38 35767.5 39 41428.0 40 45157.0 41 56915.0 42 68673.0 43 83229.5 44 97786.0 45 110806.5 46 123827.0 47 124208.5 48 124590.0 49 120957.0 50 117324.0 51 106361.5 52 95399.0 53 86362.0 54 77325.0 55 73609.5 56 69894.0 57 65213.0 58 60532.0 59 59096.0 60 57660.0 61 54553.0 62 51446.0 63 46771.0 64 35410.0 65 28724.0 66 24079.0 67 19434.0 68 16958.5 69 14483.0 70 12548.0 71 10613.0 72 9361.5 73 8110.0 74 6610.5 75 5111.0 76 3517.0 77 1923.0 78 1696.5 79 1470.0 80 1158.0 81 846.0 82 563.0 83 280.0 84 169.5 85 59.0 86 81.5 87 104.0 88 59.0 89 8.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1327838.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.749169611392446 #Duplication Level Percentage of deduplicated Percentage of total 1 73.01840100447187 14.420527861899835 2 10.743039306444512 4.24332210809657 3 3.955710704171591 2.343660048908562 4 1.8805643185451475 1.4855833476832307 5 1.0934857471088066 1.0797717743646003 6 0.7485092605034411 0.8869461804828234 7 0.6109088800749658 0.8445460162794415 8 0.39828625860905653 0.6292658300125737 9 0.35356606224364556 0.6284372518873707 >10 4.480308225880453 21.70379647731237 >50 1.9046974541503832 27.28180215225926 >100 0.8021794892527787 21.129299863504524 >500 0.005746271412985509 0.783418492796105 >1k 0.0038308476086570064 1.573948655155014 >5k 7.661695217314012E-4 0.9656739393577484 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 7574 0.5704009073396001 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5190 0.3908609333367474 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4440 0.3343781395019573 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3351 0.2523651228538421 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2103 0.1583777539127514 No Hit CTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCTT 2030 0.15288009531283184 TruSeq Adapter, Index 10 (96% over 25bp) TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1819 0.1369896026473109 No Hit CCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCT 1721 0.12960918425289833 RNA PCR Primer, Index 10 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCT 1643 0.12373497369408015 Illumina PCR Primer Index 2 (95% over 23bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1353 0.10189496007796132 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15785058117029335 0.0 2 0.0 0.0 0.0 0.496446102611915 0.0 3 0.0 0.0 0.0 0.8582372247216904 0.0 4 0.0 0.0 0.0 1.1130875905042634 0.0 5 0.0 0.0 0.0 2.4390776585697953 0.0 6 0.0 0.0 0.0 2.6970910608071166 0.0 7 0.0 0.0 0.0 3.5005023203131707 0.0 8 7.531039177972011E-5 0.0 0.0 4.471855753488001 0.0 9 7.531039177972011E-5 0.0 0.0 5.352836716527166 0.0 10 7.531039177972011E-5 0.0 0.0 5.947487570019836 0.0 11 7.531039177972011E-5 0.0 0.0 6.567141473583374 0.0 12 7.531039177972011E-5 0.0 0.0 7.062985093061051 0.0 13 7.531039177972011E-5 0.0 0.0 7.251863555644589 0.0 14 7.531039177972011E-5 0.0 0.0 7.384334534785117 0.0 15 7.531039177972011E-5 0.0 0.0 7.840338957011322 0.0 16 7.531039177972011E-5 0.0 0.0 8.447566645931206 0.0 17 7.531039177972011E-5 0.0 0.0 9.19457042199425 7.531039177972011E-5 18 7.531039177972011E-5 0.0 0.0 9.536780842241297 7.531039177972011E-5 19 7.531039177972011E-5 0.0 0.0 9.87537636368292 7.531039177972011E-5 20 7.531039177972011E-5 0.0 0.0 10.307808633282072 7.531039177972011E-5 21 7.531039177972012E-4 0.0 0.0 10.740768075623683 7.531039177972011E-5 22 8.284143095769213E-4 0.0 0.0 11.228252241613811 7.531039177972011E-5 23 8.284143095769213E-4 0.0 0.0 11.61579951771225 7.531039177972011E-5 24 8.284143095769213E-4 0.0 0.0 11.891887413976704 7.531039177972011E-5 25 9.037247013566414E-4 0.0 0.0 12.187104149753209 7.531039177972011E-5 26 9.037247013566414E-4 0.0 0.0 12.46093273426427 7.531039177972011E-5 27 9.037247013566414E-4 0.0 0.0 12.780474726585622 7.531039177972011E-5 28 9.037247013566414E-4 0.0 0.0 13.133002670506492 7.531039177972011E-5 29 9.037247013566414E-4 0.0 0.0 13.48040950778634 7.531039177972011E-5 30 9.037247013566414E-4 0.0 0.0 13.815691371989656 7.531039177972011E-5 31 9.037247013566414E-4 0.0 0.0 14.121828114574217 7.531039177972011E-5 32 9.037247013566414E-4 0.0 0.0 14.460800187974739 7.531039177972011E-5 33 9.037247013566414E-4 0.0 0.0 14.775597625613967 7.531039177972011E-5 34 9.037247013566414E-4 0.0 0.0 15.184533052977848 7.531039177972011E-5 35 9.037247013566414E-4 0.0 0.0 15.504903459608778 7.531039177972011E-5 36 9.037247013566414E-4 0.0 0.0 15.824746693497248 7.531039177972011E-5 37 0.0010543454849160816 0.0 0.0 16.161233523969038 7.531039177972011E-5 38 0.0010543454849160816 0.0 0.0 16.53206189309238 7.531039177972011E-5 39 0.0010543454849160816 0.0 0.0 16.902137158297926 7.531039177972011E-5 40 0.0010543454849160816 0.0 0.0 17.248866202051758 7.531039177972011E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTACG 35 1.01972546E-7 46.000004 8 TCGTTAG 25 3.417444E-5 46.0 26 ACTCTCG 25 3.417444E-5 46.0 21 TTATCGT 20 6.31181E-4 46.0 17 CATCGAT 20 6.31181E-4 46.0 13 TGTACGA 25 3.417444E-5 46.0 39 TATCGTG 25 3.417444E-5 46.0 22 CGATATA 25 3.417444E-5 46.0 19 TAAGACG 20 6.31181E-4 46.0 15 ATAGCGG 205 0.0 44.87805 1 CGGTCTA 245 0.0 44.122448 30 TACGCGC 95 0.0 43.57895 34 ATTGCGG 255 0.0 42.39216 1 CGTAGGG 670 0.0 41.880596 2 TATCGCG 55 4.7293724E-11 41.818184 32 GGACTAA 1670 0.0 41.730537 7 GTCGTTT 105 0.0 41.61905 8 TAGTAGG 405 0.0 41.456787 1 ATACTCG 50 8.712959E-10 41.4 43 GGTACCT 475 0.0 41.157898 7 >>END_MODULE