##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933055.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1492037 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50948736525971 33.0 31.0 34.0 31.0 34.0 2 32.86032786050212 34.0 31.0 34.0 31.0 34.0 3 32.863916913588604 34.0 31.0 34.0 31.0 34.0 4 36.3591914945809 37.0 37.0 37.0 35.0 37.0 5 36.3561962605485 37.0 37.0 37.0 35.0 37.0 6 36.48367902404565 37.0 37.0 37.0 35.0 37.0 7 36.52660624367894 37.0 37.0 37.0 35.0 37.0 8 36.393540508713926 37.0 37.0 37.0 35.0 37.0 9 38.083913468633824 39.0 39.0 39.0 35.0 39.0 10 37.9965650985867 39.0 39.0 39.0 35.0 39.0 11 37.75849928654584 39.0 38.0 39.0 35.0 39.0 12 37.66447547882526 39.0 38.0 39.0 35.0 39.0 13 37.50204720124233 39.0 38.0 39.0 35.0 39.0 14 39.06704391379034 41.0 39.0 41.0 35.0 41.0 15 39.14900434774741 41.0 39.0 41.0 35.0 41.0 16 39.139921463073634 41.0 39.0 41.0 35.0 41.0 17 39.123776421094114 41.0 38.0 41.0 35.0 41.0 18 38.92031698945804 40.0 38.0 41.0 35.0 41.0 19 38.68209233417134 40.0 37.0 41.0 35.0 41.0 20 38.456431040249 40.0 35.0 41.0 35.0 41.0 21 38.39943781555015 40.0 35.0 41.0 35.0 41.0 22 38.344753514825705 40.0 35.0 41.0 35.0 41.0 23 38.28013916544965 40.0 35.0 41.0 35.0 41.0 24 38.19817135902126 40.0 35.0 41.0 35.0 41.0 25 38.13028363237641 40.0 35.0 41.0 35.0 41.0 26 38.024523520529314 40.0 35.0 41.0 34.0 41.0 27 37.93032210327224 40.0 35.0 41.0 34.0 41.0 28 37.85842911402331 40.0 35.0 41.0 34.0 41.0 29 37.7767474935273 40.0 35.0 41.0 34.0 41.0 30 37.649225186774856 40.0 35.0 41.0 34.0 41.0 31 37.503762976387314 40.0 35.0 41.0 33.0 41.0 32 37.26890351914865 40.0 35.0 41.0 33.0 41.0 33 36.91618907574008 40.0 35.0 41.0 33.0 41.0 34 36.61387552721548 40.0 35.0 41.0 31.0 41.0 35 36.372750139574286 39.0 35.0 41.0 31.0 41.0 36 36.22555137707711 39.0 35.0 41.0 30.0 41.0 37 36.07733521353693 39.0 35.0 41.0 30.0 41.0 38 36.009441454870085 39.0 35.0 41.0 30.0 41.0 39 35.909866846465604 39.0 35.0 41.0 29.0 41.0 40 35.820162636717455 39.0 35.0 41.0 29.0 41.0 41 35.75394578016497 39.0 35.0 41.0 29.0 41.0 42 35.68573031365844 38.0 35.0 41.0 29.0 41.0 43 35.57188595188993 38.0 35.0 41.0 28.0 41.0 44 35.45048614746149 38.0 35.0 41.0 28.0 41.0 45 35.388074826562615 38.0 35.0 41.0 28.0 41.0 46 35.31330389259784 37.0 35.0 41.0 27.0 41.0 47 35.20507132195783 37.0 35.0 41.0 27.0 41.0 48 35.11522636502982 37.0 35.0 40.0 26.0 41.0 49 35.043756957769816 37.0 35.0 40.0 27.0 41.0 50 34.944794264485395 37.0 35.0 40.0 26.0 41.0 51 34.817634549277265 36.0 35.0 40.0 26.0 41.0 52 34.58688893103857 36.0 35.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 4.0 13 5.0 14 11.0 15 33.0 16 61.0 17 182.0 18 301.0 19 598.0 20 1039.0 21 1669.0 22 2714.0 23 4576.0 24 8189.0 25 15221.0 26 22993.0 27 25185.0 28 23990.0 29 21760.0 30 21635.0 31 23962.0 32 28638.0 33 37942.0 34 83251.0 35 119498.0 36 126027.0 37 142142.0 38 207952.0 39 564340.0 40 8116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.36427782957125 19.778866073696562 21.10503962033113 26.751816476401054 2 36.55036704853834 20.932590813766684 22.63683809449766 19.88020404319732 3 26.696656986388405 21.774661084142018 32.68203134372673 18.846650585742847 4 21.61132733303531 25.357212991366833 30.34120467521918 22.690255000378677 5 20.593390110298873 35.838923565568415 27.32908098123572 16.238605342896992 6 79.72563683072202 2.9251955548019253 14.77852090799357 2.57064670648248 7 80.33219015346134 1.9363460825703382 13.48994696512218 4.241516798846141 8 74.20928569465771 3.8422639653038098 17.463574964964003 4.484875375074479 9 35.84542474482871 27.51540343838658 21.999052302322262 14.640119514462443 10 27.72880297204426 20.105801665776386 33.113656028637365 19.051739333542 11 25.878245646723236 18.198744401110698 36.65029754624047 19.272712405925592 12 22.557215404175636 18.81481491410736 38.94172865686307 19.686241024853942 13 18.29465355081677 24.13606364989608 36.92140342364164 20.647879375645513 14 16.468023246072317 24.289880210745444 38.96237157657618 20.279724966606054 15 20.26491300148723 19.630411310175283 40.348731298218475 19.755944390119012 16 20.666779711227 22.772357521964935 34.826549207559864 21.734313559248193 17 19.935899712942774 26.66502238215272 34.15009145215568 19.248986452748827 18 21.73659232311263 31.301033419412523 29.737533318543708 17.224840938931138 19 20.153856774329324 27.313062611718074 30.321366025105274 22.21171458884733 20 22.468477658395873 27.0672242042255 32.32064620381398 18.14365193356465 21 18.72962935905745 24.371312507665692 31.47267795637776 25.426380176899098 22 18.236411027340473 29.534321199809387 31.488428236028998 20.740839536821138 23 17.238848634450754 30.61271268741995 32.02514414857004 20.123294529559253 24 23.600219029420852 26.292645557717403 29.793497078155568 20.313638334706177 25 18.830967328558206 25.61129516225134 30.74360756469176 24.814129944498696 26 18.18641226725611 24.247656056786795 35.021115428102654 22.544816247854442 27 20.239980643911647 23.88787945607247 34.659462198323496 21.212677701692385 28 21.169515233201324 28.430260107490636 29.373400257500315 21.02682440180773 29 21.903009107682987 24.863726569783456 33.058831650957714 20.17443267157584 30 23.97514270758701 23.76542940959239 29.435261994173068 22.82416588864753 31 23.712146548644572 26.496594923584333 28.859270916203823 20.931987611567273 32 21.35818347668322 24.616547712958862 28.753911598707006 25.27135721165092 33 19.03297304289371 25.867119917267466 31.24835376066411 23.851553279174713 34 19.293020213305702 26.56804087298103 28.870463668126195 25.268475245587073 35 25.27933288517644 28.482403586506233 26.758853835394163 19.479409692923163 36 20.42523074159689 27.912645597930887 26.836935008984362 24.825188651487863 37 22.526049957206155 29.817223031332336 26.53788076301057 21.118846248450943 38 19.074258882319942 26.077905574727705 25.450776354741873 29.397059188210477 39 21.45268515459067 25.889706488512015 30.3099051833165 22.347703173580815 40 19.105156239423017 24.015691299880633 31.972397467355034 24.906754993341316 41 19.491004579645143 29.081182303119828 28.88701821737665 22.540794899858383 42 19.344895602454898 24.987986222861768 30.10856969364701 25.55854848103633 43 22.914177061292715 26.237553090171357 31.23193325634686 19.616336592189068 44 22.17143408642011 26.051364677953696 29.41053070399729 22.366670531628905 45 22.668137586400334 26.31764493775959 29.014696016251605 21.99952145958847 46 23.20485349894138 25.702646784228538 29.01208214005417 22.08041757677591 47 20.86938862776191 29.160469881108845 28.03670418360939 21.933437307519853 48 21.116366417186704 26.9955101649624 27.229485595866592 24.658637821984307 49 19.20428246752594 24.67887860689782 31.704240578484317 24.41259834709193 50 19.308770492956945 25.62496774543795 32.74402712533268 22.322234636272427 51 18.931098893660145 24.515745923190913 31.407129984041948 25.14602519910699 52 18.131990024376073 24.183850668582615 30.937503560568537 26.746655746472776 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1564.0 1 2033.5 2 2503.0 3 32128.5 4 61754.0 5 36585.5 6 11417.0 7 11714.0 8 12011.0 9 13796.5 10 15582.0 11 17296.0 12 19010.0 13 19646.5 14 19238.5 15 18194.0 16 16256.5 17 14319.0 18 13174.0 19 12029.0 20 11147.0 21 10265.0 22 9731.5 23 9198.0 24 9317.5 25 9437.0 26 9990.0 27 10543.0 28 10945.5 29 11348.0 30 13845.5 31 16343.0 32 16539.0 33 16735.0 34 18954.5 35 21174.0 36 23597.5 37 26021.0 38 28796.5 39 32422.5 40 33273.0 41 37156.5 42 41040.0 43 48127.0 44 55214.0 45 68789.5 46 82365.0 47 97681.0 48 112997.0 49 132133.5 50 151270.0 51 140396.0 52 129522.0 53 110904.0 54 92286.0 55 83320.0 56 74354.0 57 70838.0 58 67322.0 59 66196.5 60 65071.0 61 60894.0 62 56717.0 63 53895.0 64 45466.0 65 39859.0 66 34287.0 67 28715.0 68 24311.5 69 19908.0 70 17052.5 71 14197.0 72 12901.5 73 11606.0 74 9102.5 75 6599.0 76 5161.0 77 3723.0 78 2752.5 79 1782.0 80 1437.0 81 1092.0 82 776.0 83 460.0 84 325.5 85 191.0 86 124.5 87 58.0 88 40.0 89 19.5 90 17.0 91 9.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1492037.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.612152705828453 #Duplication Level Percentage of deduplicated Percentage of total 1 72.08759490994646 21.346688686692364 2 9.307917892649764 5.512549720209155 3 4.069757791547564 3.615428675971249 4 2.339600615031747 2.7712244273188107 5 1.5899691487292182 2.3541204614862843 6 1.165238211500237 2.0703127114566873 7 0.9615379994879726 1.993124705130625 8 0.7868723729845135 1.8640787895052018 9 0.7119675052649809 1.8974601438744902 >10 6.677136528951268 39.09836272552095 >50 0.2220445475331217 4.354224246750449 >100 0.07011796981402978 3.504369607356237 >500 0.004553114026249089 0.9278154951482301 >1k 0.004325458324936635 2.631765539133311 >5k 9.106228052498178E-4 1.8678328797552868 >10k+ 4.553114026249089E-4 4.190641184690796 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49817 3.3388582186634785 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 12346 0.8274593726563081 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 8364 0.5605759106510093 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 7797 0.5225741720882257 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 6074 0.40709446213465217 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTT 5472 0.3667469372408325 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 4099 0.27472509059761924 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3804 0.25495346295031557 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3211 0.21520914025590518 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAAT 3140 0.2104505451272321 No Hit CGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 2928 0.19624178220781388 TruSeq Adapter, Index 16 (95% over 21bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 2900 0.19436515314298505 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCT 2307 0.15462083044857466 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTC 2004 0.13431302306846277 No Hit CGTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 1670 0.11192751922371898 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09061437484459166 0.0 2 0.0 0.0 0.0 0.2589748109463773 0.0 3 0.0 0.0 0.0 0.616941805062475 0.0 4 0.0 0.0 0.0 0.8972297603879796 0.0 5 0.0 0.0 0.0 2.4319102006183493 0.0 6 0.0 0.0 0.0 3.679265326530106 0.0 7 0.0 0.0 0.0 5.98316261594049 0.0 8 0.0 0.0 0.0 8.089343628877836 0.0 9 0.0 0.0 0.0 10.685592917601909 0.0 10 0.0 0.0 0.0 11.926111751920361 0.0 11 6.702246660102934E-5 0.0 0.0 12.657930064737 0.0 12 6.702246660102934E-5 0.0 0.0 13.167032721038419 0.0 13 6.702246660102934E-5 0.0 0.0 13.618429033596351 0.0 14 6.702246660102934E-5 0.0 0.0 13.815743175269782 0.0 15 1.3404493320205867E-4 0.0 0.0 14.081018098076656 0.0 16 1.3404493320205867E-4 0.0 0.0 14.341467403288256 0.0 17 1.3404493320205867E-4 0.0 0.0 14.725573159378756 0.0 18 1.3404493320205867E-4 0.0 0.0 14.91015303239799 0.0 19 1.3404493320205867E-4 0.0 0.0 15.128780318450548 0.0 20 1.3404493320205867E-4 0.0 0.0 15.352501311964783 0.0 21 1.3404493320205867E-4 0.0 0.0 15.609063314113524 0.0 22 1.3404493320205867E-4 0.0 0.0 15.861335878399798 0.0 23 2.01067399803088E-4 0.0 0.0 16.080365299251962 0.0 24 2.01067399803088E-4 0.0 0.0 16.254154555148432 0.0 25 2.01067399803088E-4 0.0 0.0 16.451200606955457 0.0 26 2.01067399803088E-4 0.0 0.0 16.675189690336097 0.0 27 2.01067399803088E-4 0.0 0.0 16.905411863110633 0.0 28 2.01067399803088E-4 0.0 0.0 17.13496381121916 0.0 29 2.01067399803088E-4 0.0 0.0 17.347022895544814 0.0 30 2.01067399803088E-4 0.0 0.0 17.568867259994224 0.0 31 2.01067399803088E-4 0.0 0.0 17.76068555940637 0.0 32 2.01067399803088E-4 0.0 0.0 18.006322899499143 0.0 33 2.01067399803088E-4 0.0 0.0 18.249949565593884 0.0 34 2.01067399803088E-4 0.0 0.0 18.59089285319332 0.0 35 2.01067399803088E-4 0.0 0.0 18.81220103790992 0.0 36 2.6808986640411734E-4 0.0 0.0 19.06025118680033 0.0 37 2.6808986640411734E-4 0.0 0.0 19.382495206218078 0.0 38 2.6808986640411734E-4 0.0 0.0 20.070413803411043 0.0 39 2.6808986640411734E-4 0.0 0.0 20.41403798967452 0.0 40 3.3511233300514666E-4 0.0 0.0 20.782460488580377 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15205 0.0 45.10753 1 ACTACGG 85 0.0 43.294117 1 TATACGG 85 0.0 43.294117 1 TACGGGA 510 0.0 42.843132 3 CGGTCTA 700 0.0 42.714287 30 TCACGAC 695 0.0 42.690647 24 CACGACG 705 0.0 42.411346 25 CGCACTT 4960 0.0 42.336693 34 CATGCGG 185 0.0 42.27027 1 ACTTACT 4935 0.0 42.224922 37 ACGGGTA 115 0.0 42.0 4 CCGCACT 5000 0.0 41.998 33 CACTTAC 4990 0.0 41.98998 36 CCCGCAC 5085 0.0 41.974434 32 GCACTTA 5005 0.0 41.910088 35 CTTACTG 4975 0.0 41.885426 38 CGACGGT 725 0.0 41.875866 27 TTTACGG 55 4.7293724E-11 41.818184 1 GTAACGG 110 0.0 41.818184 1 TTATGAC 5320 0.0 41.633457 26 >>END_MODULE