##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933051.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 905057 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43246668441877 33.0 31.0 34.0 31.0 34.0 2 32.79759285879232 34.0 31.0 34.0 31.0 34.0 3 32.836421352467305 34.0 31.0 34.0 31.0 34.0 4 36.30313781341949 37.0 37.0 37.0 35.0 37.0 5 36.206886417098595 37.0 37.0 37.0 35.0 37.0 6 36.29335721396553 37.0 37.0 37.0 35.0 37.0 7 36.49270819406954 37.0 37.0 37.0 35.0 37.0 8 36.41722455049793 37.0 37.0 37.0 35.0 37.0 9 38.24313164806195 39.0 39.0 39.0 37.0 39.0 10 37.95291014820061 39.0 38.0 39.0 35.0 39.0 11 37.628193583387564 39.0 37.0 39.0 35.0 39.0 12 37.21665817733027 39.0 35.0 39.0 35.0 39.0 13 37.10849592898569 39.0 35.0 39.0 33.0 39.0 14 38.03463870231378 40.0 36.0 41.0 33.0 41.0 15 38.261268627279826 40.0 36.0 41.0 33.0 41.0 16 38.46763794987498 40.0 36.0 41.0 34.0 41.0 17 38.485857796801746 40.0 36.0 41.0 35.0 41.0 18 38.472329367100635 40.0 36.0 41.0 35.0 41.0 19 38.44379746248026 40.0 36.0 41.0 35.0 41.0 20 38.28737968989798 40.0 35.0 41.0 34.0 41.0 21 38.24028873319581 40.0 35.0 41.0 34.0 41.0 22 38.18566565420741 40.0 35.0 41.0 34.0 41.0 23 38.16133017036496 40.0 35.0 41.0 34.0 41.0 24 38.113768525076324 40.0 35.0 41.0 34.0 41.0 25 37.97961785832273 40.0 35.0 41.0 34.0 41.0 26 37.88494978769293 40.0 35.0 41.0 34.0 41.0 27 37.795568676889964 40.0 35.0 41.0 34.0 41.0 28 37.797704453973616 40.0 35.0 41.0 34.0 41.0 29 37.75581427468104 40.0 35.0 41.0 34.0 41.0 30 37.69060180739998 40.0 35.0 41.0 34.0 41.0 31 37.57485882104663 40.0 35.0 41.0 34.0 41.0 32 37.48019406512518 40.0 35.0 41.0 34.0 41.0 33 37.346521821277555 40.0 35.0 41.0 33.0 41.0 34 37.22568081347362 40.0 35.0 41.0 33.0 41.0 35 37.10930029821326 40.0 35.0 41.0 33.0 41.0 36 36.98243978003595 39.0 35.0 41.0 33.0 41.0 37 36.86891212376679 39.0 35.0 41.0 32.0 41.0 38 36.79100763819295 39.0 35.0 41.0 32.0 41.0 39 36.77429266885953 39.0 35.0 41.0 32.0 41.0 40 36.72929992254632 39.0 35.0 41.0 32.0 41.0 41 36.58036013201379 39.0 35.0 41.0 32.0 41.0 42 36.615183353092675 39.0 35.0 41.0 32.0 41.0 43 36.568620539921795 39.0 35.0 41.0 32.0 41.0 44 36.56762612741518 39.0 35.0 41.0 32.0 41.0 45 36.494676025929856 39.0 35.0 41.0 32.0 41.0 46 36.435410145438354 38.0 35.0 41.0 32.0 41.0 47 36.332906104256416 38.0 35.0 41.0 32.0 41.0 48 36.22282684957964 38.0 35.0 41.0 31.0 41.0 49 36.18382599107017 38.0 35.0 41.0 31.0 41.0 50 36.05166193952425 38.0 35.0 41.0 31.0 41.0 51 35.99148782894337 38.0 35.0 40.0 31.0 41.0 52 35.74998038797556 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 5.0 12 4.0 13 4.0 14 6.0 15 18.0 16 46.0 17 89.0 18 171.0 19 331.0 20 597.0 21 944.0 22 1545.0 23 2453.0 24 3466.0 25 5162.0 26 6909.0 27 8251.0 28 9061.0 29 10267.0 30 11985.0 31 14734.0 32 18773.0 33 25993.0 34 66925.0 35 106591.0 36 58489.0 37 67094.0 38 110248.0 39 372831.0 40 2064.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.487362674395094 22.469524018929192 26.595783469991392 13.447329836684318 2 35.411913282809806 24.41116968323542 26.525180182021685 13.651736851933084 3 31.679220203810367 24.40199899011885 29.88695739605351 14.03182341001727 4 28.185959558348262 27.694609289801637 29.450410305649257 14.669020846200848 5 25.88267921246949 31.126216359853576 26.73168651256219 16.25941791511474 6 26.926922834694388 39.639492319268285 23.62116419186858 9.812420654168744 7 86.14264073975451 1.9176692738689387 8.868944165947559 3.0707458204289892 8 83.23718837598074 2.0583233984157903 9.580170088734743 5.124318136868728 9 77.70041002942357 3.775342326505402 12.640640313262038 5.8836073308089984 10 48.01763866806179 22.00612779084632 17.09019431925282 12.886039221839066 11 31.98240552804961 22.80132632530327 27.809077218340946 17.407190928306175 12 30.396207089719212 19.83510430834743 30.94766406977682 18.82102453215654 13 27.065809114785033 23.660167260183613 32.55264585545441 16.721377769576947 14 18.104384585722226 25.200401742652673 35.951989764180595 20.743223907444502 15 14.702720381147264 29.13286124520334 38.24598892666429 17.918429446985108 16 23.927001282792133 26.365190258735083 32.79760280291739 16.910205655555398 17 22.995347254371822 25.50016186825802 27.831064783765 23.673426093605155 18 20.965530347812347 26.16619726713345 33.08443556593673 19.78383681911747 19 21.373570946360285 28.473786733874217 27.27297838699662 22.879663932768874 20 17.868598331375814 35.75752687399799 27.18281831973014 19.191056474896058 21 21.82691255909849 29.066125116981585 31.478459367752524 17.628502956167402 22 19.61931679441184 25.462263702728116 31.89290840245421 23.025511100405833 23 19.47468501983853 26.30309472221087 31.607512013055533 22.614708244895073 24 20.436281913735822 28.597425355530092 30.71707085852051 20.249221872213575 25 21.846690318952287 26.051950319151167 29.57449088841918 22.52686847347736 26 19.16475978861 30.272899938898878 26.530594205668812 24.03174606682231 27 22.55625888756178 27.889624631376808 29.14844037447365 20.405676106587762 28 17.83998134924099 30.264613168010413 27.36380139593418 24.531604086814422 29 21.453565908003586 28.78680569290111 26.429274620272537 23.330353778822772 30 25.11101510733578 28.16319856097461 25.521155021175463 21.204631310514145 31 22.5744897835164 29.88938818218079 27.287452613481804 20.24866942082101 32 26.53932293767133 27.550088005506833 25.244597854057808 20.665991202764026 33 24.102901806184583 29.898116914183305 26.333921509915946 19.665059769716162 34 20.436834365128384 27.775709154230064 31.289189520660027 20.498266959981525 35 22.999987846069363 30.976723013025698 26.73478024036055 19.288508900544386 36 26.09669888194887 29.553055774387694 25.53165159763418 18.818593746029254 37 23.374881361063444 29.7716055452861 28.406498154259896 18.447014939390556 38 22.784421312690803 28.390035102761484 29.354394253621596 19.471149330926117 39 23.18119190283043 28.813654830579733 27.060395091137906 20.944758175451934 40 27.34413412635889 25.437292899784214 28.312802398081004 18.90577057577589 41 21.38859762423803 26.012284309165057 27.78034974592761 24.818768320669307 42 22.10634247345747 26.902062522028995 30.049930556859955 20.941664447653572 43 21.344180532275868 26.9631636460466 31.211625345144007 20.481030476533522 44 23.005401869716493 27.163593011268905 27.51484160666124 22.316163512353366 45 21.07823043189545 26.431042464728744 26.22785084254362 26.26287626083219 46 23.964236506650963 25.552534260273106 27.92962211219846 22.55360712087747 47 20.19132496627284 25.703353490443142 30.736848618374314 23.368472924909703 48 20.94122248653952 27.27607211479498 29.673158707131154 22.109546691534344 49 25.443922316494984 24.71092980884077 28.23766900869227 21.607478865971977 50 22.1513120168122 25.416299746866773 28.73830046063397 23.694087775687056 51 20.114644712984926 25.145046113117736 27.472081868876767 27.26822730502057 52 21.422518139741477 25.843123692761893 30.057333405520314 22.677024761976316 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 878.0 1 1851.5 2 2825.0 3 7712.5 4 12600.0 5 7347.5 6 2095.0 7 2500.0 8 2905.0 9 4044.5 10 5184.0 11 6550.5 12 7917.0 13 8275.0 14 7734.5 15 6836.0 16 6139.5 17 5443.0 18 5144.0 19 4845.0 20 4347.0 21 3849.0 22 3934.5 23 4020.0 24 4107.0 25 4194.0 26 4937.5 27 5681.0 28 6497.5 29 7314.0 30 8381.0 31 9448.0 32 11275.5 33 13103.0 34 15248.0 35 17393.0 36 17528.5 37 17664.0 38 20685.0 39 26741.0 40 29776.0 41 38578.0 42 47380.0 43 57997.0 44 68614.0 45 79586.0 46 90558.0 47 92246.5 48 93935.0 49 88258.0 50 82581.0 51 71740.5 52 60900.0 53 56721.0 54 52542.0 55 46752.0 56 40962.0 57 41729.0 58 42496.0 59 42971.5 60 43447.0 61 34590.0 62 25733.0 63 23193.0 64 16900.5 65 13148.0 66 11681.0 67 10214.0 68 7997.5 69 5781.0 70 4436.5 71 3092.0 72 3016.5 73 2941.0 74 2329.0 75 1717.0 76 1413.0 77 1109.0 78 733.0 79 357.0 80 385.0 81 413.0 82 260.0 83 107.0 84 82.0 85 57.0 86 30.5 87 4.0 88 5.0 89 3.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 905057.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.957442394832423 #Duplication Level Percentage of deduplicated Percentage of total 1 69.28265205208717 15.212698413949221 2 12.61614234143837 5.5403643741427855 3 5.351216644190869 3.524970936212684 4 2.71678691801423 2.3861476900532708 5 1.6397668207416956 1.800254275369664 6 1.056150451400328 1.3914217618139375 7 0.7181252133248215 1.103773510269956 8 0.5243050017551018 0.9209917498688127 9 0.43710143922852135 0.8637866705302742 >10 3.6825587768351604 17.410456533040374 >50 1.0800423276281228 17.20277952264512 >100 0.8845435527006827 27.8167247785468 >500 0.006061977517080635 0.9584706806049264 >1k 0.003536153551630371 1.7272659921745068 >5k 5.051647930900529E-4 0.95869252314181 >10k+ 5.051647930900529E-4 1.181200587635906 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10649 1.1766109758832868 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 8643 0.9549674771865198 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 4627 0.5112385186789341 No Hit CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCTT 2598 0.2870537435763714 TruSeq Adapter, Index 21 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 2416 0.26694451288703364 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 2394 0.26451372675975104 TruSeq Adapter, Index 15 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 1242 0.13722892591295355 TruSeq Adapter, Index 21 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1208 0.13347225644351682 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCG 1087 0.12010293274346256 No Hit TCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 982 0.10850145349961383 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.29688737836401463 0.0 2 0.0 0.0 0.0 1.0507625486571563 0.0 3 0.0 0.0 0.0 1.6195665024412826 0.0 4 0.0 0.0 0.0 2.288143177722508 0.0 5 0.0 0.0 0.0 4.092117955001729 0.0 6 0.0 0.0 0.0 5.7727855814606155 0.0 7 0.0 0.0 0.0 7.206838906278831 0.0 8 0.0 0.0 0.0 9.785571516490121 0.0 9 0.0 0.0 0.0 11.103278578034312 0.0 10 0.0 0.0 0.0 12.450265563384406 0.0 11 0.0 0.0 0.0 14.627034540365965 0.0 12 0.0 0.0 0.0 15.767515195175552 0.0 13 0.0 0.0 0.0 16.23433662189232 0.0 14 0.0 0.0 0.0 16.428910002353444 0.0 15 0.0 0.0 0.0 16.763364075411825 0.0 16 0.0 0.0 0.0 17.384429930932527 0.0 17 0.0 0.0 0.0 18.112008414939613 0.0 18 0.0 0.0 0.0 18.874391336678244 0.0 19 0.0 0.0 0.0 19.338560996710704 0.0 20 0.0 0.0 0.0 19.89178582122452 0.0 21 0.0 0.0 0.0 20.445673587409413 0.0 22 0.0 0.0 0.0 21.048619037254007 0.0 23 0.0 0.0 0.0 21.603390725667 0.0 24 1.1049027851284505E-4 0.0 0.0 22.004912397782682 0.0 25 1.1049027851284505E-4 0.0 0.0 22.448641356290267 0.0 26 1.1049027851284505E-4 0.0 0.0 22.82320340044881 0.0 27 1.1049027851284505E-4 0.0 0.0 23.289803846608557 0.0 28 1.1049027851284505E-4 0.0 0.0 23.674199525554744 0.0 29 1.1049027851284505E-4 0.0 0.0 24.124778881330126 0.0 30 1.1049027851284505E-4 0.0 0.0 25.058753205599206 0.0 31 1.1049027851284505E-4 0.0 0.0 25.507122755804332 0.0 32 1.1049027851284505E-4 0.0 0.0 25.846880362231328 0.0 33 1.1049027851284505E-4 0.0 0.0 26.243650952370956 0.0 34 1.1049027851284505E-4 0.0 0.0 26.68660647892895 0.0 35 1.1049027851284505E-4 0.0 0.0 27.134092106905975 0.0 36 1.1049027851284505E-4 0.0 0.0 27.502687676024824 0.0 37 1.1049027851284505E-4 0.0 0.0 27.888740709148706 0.0 38 1.1049027851284505E-4 0.0 0.0 28.32153113008352 0.0 39 1.1049027851284505E-4 0.0 0.0 29.51261633245199 0.0 40 1.1049027851284505E-4 0.0 0.0 29.92397163935531 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTAGA 75 0.0 46.000004 28 GCAATAG 75 0.0 46.000004 1 GTCATCG 25 3.416576E-5 46.0 13 CGGGTAG 30 1.8609608E-6 46.0 6 AAGTACG 55 1.8189894E-12 46.0 1 TCGTTTC 20 6.31074E-4 46.0 37 GATACGA 20 6.31074E-4 46.0 13 TCGTTAT 40 5.6097633E-9 46.0 11 ACACGTT 25 3.416576E-5 46.0 17 TCGCACC 20 6.31074E-4 46.0 25 TACCCCG 20 6.31074E-4 46.0 25 CGAACGT 30 1.8609608E-6 46.0 29 ACGCCCG 20 6.31074E-4 46.0 16 CTCGTAC 95 0.0 46.0 29 ATAGGCG 20 6.31074E-4 46.0 29 CACGGAT 25 3.416576E-5 46.0 18 GCGAATA 25 3.416576E-5 46.0 9 TCCGATC 20 6.31074E-4 46.0 19 ACGTTCA 20 6.31074E-4 46.0 35 CTATCGA 20 6.31074E-4 46.0 37 >>END_MODULE