##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933049.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 767701 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40500924187933 33.0 31.0 34.0 31.0 34.0 2 32.75535788021639 34.0 31.0 34.0 31.0 34.0 3 32.730705053139175 34.0 31.0 34.0 31.0 34.0 4 36.24185587878614 37.0 37.0 37.0 35.0 37.0 5 36.093776092515185 37.0 35.0 37.0 35.0 37.0 6 36.20153158586481 37.0 36.0 37.0 35.0 37.0 7 36.49138141021049 37.0 37.0 37.0 35.0 37.0 8 36.44570737826315 37.0 37.0 37.0 35.0 37.0 9 38.25988373077539 39.0 39.0 39.0 37.0 39.0 10 37.94035177758008 39.0 38.0 39.0 35.0 39.0 11 37.59677009669129 39.0 37.0 39.0 35.0 39.0 12 37.29958799063698 39.0 37.0 39.0 35.0 39.0 13 37.225417187160105 39.0 37.0 39.0 34.0 39.0 14 37.89361352922557 40.0 37.0 41.0 32.0 41.0 15 38.21552661778479 40.0 37.0 41.0 33.0 41.0 16 38.49469780552585 41.0 37.0 41.0 33.0 41.0 17 38.56406465538016 41.0 37.0 41.0 35.0 41.0 18 38.4691904791058 40.0 37.0 41.0 35.0 41.0 19 38.36760014641117 40.0 37.0 41.0 35.0 41.0 20 38.11417205396372 40.0 35.0 41.0 34.0 41.0 21 38.08053916824389 40.0 35.0 41.0 34.0 41.0 22 38.05801737916194 40.0 35.0 41.0 34.0 41.0 23 38.040875288686614 40.0 35.0 41.0 34.0 41.0 24 37.9767565758023 40.0 35.0 41.0 34.0 41.0 25 37.77877715412641 40.0 35.0 41.0 34.0 41.0 26 37.693112292415925 40.0 35.0 41.0 34.0 41.0 27 37.600499413182995 39.0 35.0 41.0 34.0 41.0 28 37.5167063739659 39.0 35.0 41.0 34.0 41.0 29 37.44176313434527 39.0 35.0 41.0 34.0 41.0 30 37.3722829591208 39.0 35.0 41.0 34.0 41.0 31 37.18665600279275 39.0 35.0 41.0 33.0 41.0 32 37.053321540547685 39.0 35.0 41.0 33.0 41.0 33 36.91377502439101 39.0 35.0 41.0 33.0 41.0 34 36.65491512971847 39.0 35.0 41.0 32.0 41.0 35 36.582363446185425 39.0 35.0 41.0 32.0 41.0 36 36.510908543821095 39.0 35.0 41.0 32.0 41.0 37 36.37401410184434 39.0 35.0 41.0 31.0 41.0 38 36.36280010055999 39.0 35.0 41.0 31.0 41.0 39 36.30835833221528 39.0 35.0 41.0 31.0 41.0 40 36.21973268238546 39.0 35.0 41.0 31.0 41.0 41 36.0516568299377 39.0 35.0 41.0 30.0 41.0 42 36.11332146239226 38.0 35.0 41.0 31.0 41.0 43 36.08527278198153 38.0 35.0 41.0 31.0 41.0 44 36.059166263949116 38.0 35.0 41.0 31.0 41.0 45 35.9954279074796 38.0 35.0 41.0 31.0 41.0 46 35.91926023282502 38.0 35.0 41.0 31.0 41.0 47 35.81367355259405 38.0 35.0 41.0 31.0 41.0 48 35.69993916902544 38.0 35.0 41.0 30.0 41.0 49 35.676510776982184 37.0 35.0 41.0 30.0 41.0 50 35.565752812618456 37.0 35.0 40.0 30.0 41.0 51 35.47511205534446 37.0 35.0 40.0 29.0 41.0 52 35.22721476199718 36.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 1.0 14 9.0 15 20.0 16 35.0 17 100.0 18 200.0 19 363.0 20 575.0 21 981.0 22 1541.0 23 2390.0 24 4063.0 25 6739.0 26 8650.0 27 9148.0 28 9404.0 29 10056.0 30 11266.0 31 13665.0 32 17066.0 33 23969.0 34 57956.0 35 73521.0 36 67288.0 37 64894.0 38 85516.0 39 296429.0 40 1853.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.99135470710602 21.18598256352408 25.62950940535443 16.19315332401547 2 40.70126260093448 21.83284898678001 24.592647397880164 12.873241014405348 3 31.361037695665374 22.248375344046707 33.169424033575574 13.221162926712351 4 28.346843367404755 25.19092719691651 32.69580214171924 13.766427293959497 5 23.503812030986023 29.44922567510007 32.47175658231525 14.575205711598658 6 25.182460358915776 35.58143079141489 30.212673944673774 9.023434904995565 7 82.69808167502713 1.5754831633669881 13.130893407719931 2.595541753885953 8 80.35433065737833 2.0059893109426716 13.62600804219351 4.0136719894854895 9 75.1181775196333 3.817111088822341 15.829860844260981 5.234850547283383 10 44.98404977979708 25.392437941333927 19.406383474816366 10.217128804052619 11 27.138951232315705 23.271560151673633 33.28483354847786 16.304655067532803 12 27.64500762666715 17.908013666779123 36.10376956653697 18.34320914001675 13 27.407545385508158 19.25984204788062 38.8353017646193 14.497310801991922 14 16.317159935964654 22.099228736187655 43.07992304295553 18.503688284892164 15 13.05482212475951 29.327303207889532 41.37444135151576 16.2434333158352 16 26.570370495805008 27.13191724382279 31.900961442019742 14.396750818352459 17 23.146771985447458 26.077991301300894 29.222835452865116 21.55240126038653 18 20.470469622939138 25.441806119830506 36.70257040175798 17.385153855472378 19 19.763553779401093 28.7416585363312 30.62689771147882 20.867889972788888 20 14.448463659680005 39.68107375136935 29.329908388812832 16.540554200137812 21 19.55943785406037 29.34111066678303 37.09738557068442 14.002065908472177 22 15.943186214424626 25.4952123287582 39.51343035895486 19.04817109786232 23 17.467217054556397 26.996057058672584 36.9320868411009 18.604639045670122 24 19.78739118484931 31.11211265844385 30.704271584900894 18.39622457180595 25 21.114991383364096 28.528554736805084 31.20498735835957 19.15146652147125 26 15.244216172702654 32.13868420127107 28.210071368931395 24.407028257094883 27 20.367825494561036 27.587172610169848 33.15535605658974 18.88964583867938 28 14.725654909919356 31.265036778641687 28.66741088001709 25.341897431421867 29 20.87023463561986 31.291739883105528 27.761589472984927 20.076436008289686 30 24.582747710371617 26.43307746114698 27.321053378854526 21.663121449626875 31 20.00127653865242 29.711437135030433 30.677828998529378 19.609457327787773 32 24.350105053920732 27.853682618623655 27.13595527425391 20.660257053201704 33 24.144165501933696 26.49221506810594 29.978077402530413 19.38554202742995 34 17.175176273054223 28.808481427013906 34.48074185131972 19.535600448612158 35 19.583796295693247 32.29603712903852 29.732408841463016 18.38775773380522 36 23.15849529960232 28.784644021565686 27.792981903110714 20.263878775721277 37 16.403391424525953 33.94550743062729 30.042425371335973 19.608675773510782 38 20.21802759147116 28.83583582670858 33.309452508203066 17.636684073617204 39 18.656742664136168 30.56776010451986 29.289918861640146 21.48557836970383 40 24.422529083588532 28.30047114696998 30.88376855051641 16.393231218925074 41 17.048173703043243 28.54561867185271 29.581308347911488 24.824899277192554 42 16.922213205401583 29.51422493913646 34.49272568356691 19.07083617189505 43 16.905019011307786 29.40637044891175 33.61985981521451 20.068750724565945 44 22.487530952805844 27.66793321879221 28.64448528789203 21.200050540509913 45 18.701551776016963 26.7272023873878 27.595509189124414 26.97573664747083 46 21.398956104004032 26.997620167226565 29.202645300709523 22.400778428059883 47 16.035149101017193 28.24393872093432 33.67339628318838 22.04751589486011 48 16.483109960779004 32.309584069839694 30.499895141467835 20.70741082791347 49 22.106002206588244 28.267255090197878 30.408453291059928 19.21828941215395 50 18.775278396146415 27.579617585492265 30.02184444204189 23.623259576319427 51 18.46018176347302 28.13660526689427 28.292004308969247 25.111208660663458 52 18.126067310059515 29.329778129766666 30.274937768740696 22.269216791433124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 769.0 1 1525.5 2 2282.0 3 15852.0 4 29422.0 5 16378.0 6 3334.0 7 3784.0 8 4234.0 9 5976.5 10 7719.0 11 9994.0 12 12269.0 13 12913.5 14 12969.5 15 12381.0 16 11130.0 17 9879.0 18 8721.5 19 7564.0 20 6946.5 21 6329.0 22 6070.5 23 5812.0 24 6060.0 25 6308.0 26 6662.0 27 7016.0 28 7493.5 29 7971.0 30 8874.0 31 9777.0 32 10342.5 33 10908.0 34 12849.5 35 14791.0 36 15213.0 37 15635.0 38 17231.0 39 21523.0 40 24219.0 41 29163.5 42 34108.0 43 40310.0 44 46512.0 45 54831.0 46 63150.0 47 67052.0 48 70954.0 49 71878.5 50 72803.0 51 62256.5 52 51710.0 53 46975.0 54 42240.0 55 38919.5 56 35599.0 57 34152.0 58 32705.0 59 35493.0 60 38281.0 61 27124.5 62 15968.0 63 13239.0 64 9166.5 65 7823.0 66 6657.0 67 5491.0 68 4344.5 69 3198.0 70 2668.0 71 2138.0 72 1665.0 73 1192.0 74 1046.5 75 901.0 76 815.5 77 730.0 78 539.0 79 348.0 80 261.0 81 174.0 82 137.5 83 101.0 84 65.5 85 30.0 86 27.0 87 24.0 88 12.5 89 1.0 90 1.0 91 3.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 767701.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.54049984625587 #Duplication Level Percentage of deduplicated Percentage of total 1 69.98130636565352 24.171893017636407 2 12.154176242011474 8.39622645237128 3 5.080876249307973 5.264880159242014 4 2.7442068279478398 3.791451020753067 5 1.7296622126471657 2.987169869500701 6 1.138161805204478 2.358760659460774 7 0.8614995489617645 2.0829637526924327 8 0.6811210534914972 1.8821009314723758 9 0.5708544564800592 1.7745838439655566 >10 4.909528984792462 32.22774731765356 >50 0.10020523620814634 2.2217899657658426 >100 0.03630076297026505 2.4191400866801582 >500 0.004915728318890041 1.0720387556133624 >1k 0.00605012716171082 3.2452420761117464 >5k 3.7813294760692624E-4 0.7769930016013514 >10k+ 7.562658952138525E-4 5.327019089479361 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26281 3.4233379922652176 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 14505 1.8894074646248995 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 5949 0.7749110656362307 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCG 2826 0.36811206446259676 No Hit GGGGCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCT 2601 0.33880377907544734 Illumina PCR Primer Index 5 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGCTT 2104 0.27406503313138836 Illumina PCR Primer Index 5 (96% over 25bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGCATGATTTCG 1657 0.21583923949558487 No Hit GCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGCT 1650 0.2149274261724291 Illumina PCR Primer Index 5 (95% over 24bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1601 0.20854473291033881 No Hit CCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGCT 1577 0.20541851580237616 Illumina PCR Primer Index 5 (95% over 24bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCC 1393 0.1814508513079962 No Hit CGCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCTGC 1309 0.1705090914301271 Illumina PCR Primer Index 5 (95% over 23bp) CGTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTCT 1251 0.1629540667525508 Illumina PCR Primer Index 5 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCT 1176 0.15318463829016765 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1164 0.15162152973618634 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTTC 1153 0.15018868022837015 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGCATGATTT 1143 0.14888608976671908 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTT 1129 0.14706246312040755 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1113 0.1449783183817658 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGT 875 0.11397666539446998 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3025904616510855E-4 0.0 0.0 0.28565808824008304 0.0 2 1.3025904616510855E-4 0.0 0.0 0.8429062877344174 0.0 3 1.3025904616510855E-4 0.0 0.0 1.3984611196286054 0.0 4 1.3025904616510855E-4 0.0 0.0 2.04011718103793 0.0 5 1.3025904616510855E-4 0.0 0.0 4.0556154023506545 0.0 6 1.3025904616510855E-4 0.0 0.0 5.656629338766004 0.0 7 1.3025904616510855E-4 0.0 0.0 6.769171852062196 0.0 8 1.3025904616510855E-4 0.0 0.0 8.86113213347384 0.0 9 1.3025904616510855E-4 0.0 0.0 9.938113927166956 0.0 10 1.3025904616510855E-4 0.0 0.0 11.425020939141671 0.0 11 1.3025904616510855E-4 0.0 0.0 13.776587499560376 0.0 12 1.3025904616510855E-4 0.0 0.0 15.216861773007981 0.0 13 1.3025904616510855E-4 0.0 0.0 15.896944253036013 0.0 14 1.3025904616510855E-4 0.0 0.0 16.510724878566005 0.0 15 1.3025904616510855E-4 0.0 0.0 16.99633060266953 0.0 16 1.3025904616510855E-4 0.0 0.0 17.712234320392966 0.0 17 1.3025904616510855E-4 0.0 0.0 18.55045128246544 0.0 18 1.3025904616510855E-4 0.0 0.0 19.50616190417884 0.0 19 1.3025904616510855E-4 0.0 0.0 20.08034377967464 0.0 20 1.3025904616510855E-4 0.0 0.0 20.828291222754693 0.0 21 1.3025904616510855E-4 0.0 0.0 21.500948937151314 0.0 22 1.3025904616510855E-4 0.0 0.0 22.195359912257505 0.0 23 1.3025904616510855E-4 0.0 0.0 22.852126023021984 0.0 24 2.605180923302171E-4 0.0 0.0 23.34489599466459 0.0 25 2.605180923302171E-4 0.0 0.0 23.881302746772505 0.0 26 2.605180923302171E-4 0.0 0.0 24.357790337644474 0.0 27 2.605180923302171E-4 0.0 0.0 25.049596131827364 0.0 28 2.605180923302171E-4 0.0 0.0 25.5288191626688 0.0 29 2.605180923302171E-4 0.0 0.0 26.152629734753503 0.0 30 2.605180923302171E-4 0.0 0.0 27.42617242910977 0.0 31 2.605180923302171E-4 0.0 0.0 28.00269896743654 0.0 32 3.9077713849532564E-4 0.0 0.0 28.465639617507335 0.0 33 3.9077713849532564E-4 0.0 0.0 28.977818187028543 0.0 34 3.9077713849532564E-4 0.0 0.0 29.556428870093956 0.0 35 3.9077713849532564E-4 0.0 0.0 30.062355005399237 0.0 36 3.9077713849532564E-4 0.0 0.0 30.487911309220646 0.0 37 3.9077713849532564E-4 0.0 0.0 30.998135993049377 0.0 38 3.9077713849532564E-4 0.0 0.0 31.567758801929397 0.0 39 3.9077713849532564E-4 0.0 0.0 33.219964543487635 0.0 40 3.9077713849532564E-4 0.0 0.0 33.749337307102635 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAA 20 6.310137E-4 46.000004 33 CGTATAA 20 6.310137E-4 46.000004 28 GATAACG 40 5.6079443E-9 46.000004 1 ATCACGG 20 6.310137E-4 46.000004 2 GTTCGCG 20 6.310137E-4 46.000004 1 GCTAGCG 20 6.310137E-4 46.000004 1 CGTAACC 20 6.310137E-4 46.000004 35 ACCGTGC 20 6.310137E-4 46.000004 36 CCGGTAT 20 6.310137E-4 46.000004 42 CGCACGA 20 6.310137E-4 46.000004 40 CGGTATT 20 6.310137E-4 46.000004 43 TGGCGTG 25 3.4160883E-5 46.0 1 GCGTTAG 45 3.092282E-10 46.0 1 GTTACCG 30 1.8605897E-6 46.0 38 ACTCGGC 30 1.8605897E-6 46.0 28 CCGGTGA 25 3.4160883E-5 46.0 27 ATAACGG 45 3.092282E-10 46.0 2 CGGTAGT 165 0.0 46.0 12 GACGTAG 35 1.0189797E-7 45.999996 1 CGTTAGG 70 0.0 45.999996 2 >>END_MODULE