##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933046.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1489446 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.504168664053616 33.0 31.0 34.0 31.0 34.0 2 32.89640980606212 34.0 31.0 34.0 31.0 34.0 3 32.92829548704686 34.0 31.0 34.0 31.0 34.0 4 36.379623699012924 37.0 37.0 37.0 35.0 37.0 5 36.29239059354955 37.0 37.0 37.0 35.0 37.0 6 36.37994395231516 37.0 37.0 37.0 35.0 37.0 7 36.555519971855304 37.0 37.0 37.0 35.0 37.0 8 36.51567092731123 37.0 37.0 37.0 35.0 37.0 9 38.34333101032196 39.0 39.0 39.0 37.0 39.0 10 38.03506538672768 39.0 39.0 39.0 35.0 39.0 11 37.727261679846066 39.0 38.0 39.0 35.0 39.0 12 37.442621619044935 39.0 37.0 39.0 35.0 39.0 13 37.38462354459309 39.0 37.0 39.0 35.0 39.0 14 38.343373979318486 41.0 38.0 41.0 33.0 41.0 15 38.56575733527768 41.0 38.0 41.0 33.0 41.0 16 38.76900270301844 41.0 38.0 41.0 35.0 41.0 17 38.797285030810116 41.0 38.0 41.0 35.0 41.0 18 38.69234198487223 40.0 38.0 41.0 35.0 41.0 19 38.618336616433226 40.0 37.0 41.0 35.0 41.0 20 38.45409836946086 40.0 36.0 41.0 35.0 41.0 21 38.41527453831827 40.0 35.0 41.0 35.0 41.0 22 38.37113396524614 40.0 35.0 41.0 35.0 41.0 23 38.33484731907031 40.0 35.0 41.0 35.0 41.0 24 38.29222543146915 40.0 35.0 41.0 35.0 41.0 25 38.182827709094525 40.0 35.0 41.0 34.0 41.0 26 38.10118258735127 40.0 35.0 41.0 34.0 41.0 27 38.008121140343455 40.0 35.0 41.0 34.0 41.0 28 37.97160286442073 40.0 35.0 41.0 34.0 41.0 29 37.9140975906478 40.0 35.0 41.0 34.0 41.0 30 37.86426295414537 40.0 35.0 41.0 34.0 41.0 31 37.737374836012854 40.0 35.0 41.0 34.0 41.0 32 37.60631738243615 40.0 35.0 41.0 34.0 41.0 33 37.4641094742609 40.0 35.0 41.0 33.0 41.0 34 37.2564094300834 40.0 35.0 41.0 33.0 41.0 35 37.14047437772165 40.0 35.0 41.0 33.0 41.0 36 37.058689606739684 40.0 35.0 41.0 33.0 41.0 37 36.94216507345684 40.0 35.0 41.0 32.0 41.0 38 36.91988296319571 40.0 35.0 41.0 33.0 41.0 39 36.878516575961804 40.0 35.0 41.0 32.0 41.0 40 36.826552959959606 40.0 35.0 41.0 32.0 41.0 41 36.71428772845743 40.0 35.0 41.0 32.0 41.0 42 36.725260935945315 40.0 35.0 41.0 32.0 41.0 43 36.68182062323844 40.0 35.0 41.0 32.0 41.0 44 36.64478067684226 39.0 35.0 41.0 32.0 41.0 45 36.59102713357853 39.0 35.0 41.0 32.0 41.0 46 36.538225622144076 39.0 35.0 41.0 32.0 41.0 47 36.45930030360282 39.0 35.0 41.0 31.0 41.0 48 36.35033495675573 39.0 35.0 41.0 31.0 41.0 49 36.30265212703247 39.0 35.0 41.0 31.0 41.0 50 36.19936338746084 39.0 35.0 41.0 31.0 41.0 51 36.12149886602133 38.0 35.0 41.0 31.0 41.0 52 35.888513581559856 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 5.0 14 10.0 15 21.0 16 69.0 17 177.0 18 316.0 19 588.0 20 1032.0 21 1592.0 22 2483.0 23 4254.0 24 6697.0 25 10892.0 26 14637.0 27 15819.0 28 15969.0 29 16575.0 30 18256.0 31 21618.0 32 27233.0 33 37809.0 34 96917.0 35 141544.0 36 93422.0 37 102214.0 38 168659.0 39 686689.0 40 3944.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.23803749850615 22.840975772199865 25.885127758911704 15.035858970382277 2 36.88364667131269 23.540161912550037 26.42868556496845 13.147505851168823 3 29.741326640912124 23.74473461944911 32.778966139087956 13.73497260055081 4 26.763239486359357 27.573876461449427 31.549045752581833 14.113838299609386 5 24.808552978758545 32.02506166722392 28.6844907435382 14.481894610479332 6 26.764112294101295 39.59781019251453 25.001443489727055 8.636634023657118 7 87.60948701732053 1.4918298481448808 9.06874099497397 1.8299421395606152 8 86.41985006505774 1.84968102233985 9.250352144354345 2.48011676824806 9 81.26263053511171 4.003971946616393 11.251028906049632 3.482368612222263 10 43.91183030469047 27.71668123584205 16.3856897128194 11.985798746648083 11 27.148147700554436 24.191075070865274 33.43739887179529 15.223378356785005 12 28.57478552428218 19.87074388732455 33.355086387824734 18.199384200568534 13 27.909571746810556 20.960142227378505 34.716196491849985 16.414089533960947 14 18.153192529302842 23.206010825501565 37.56571235210944 21.075084293086157 15 14.778380686510287 29.726018935899656 38.06059434178883 17.43500603580123 16 26.44761877906282 27.72030674492395 31.041138785830434 14.790935690182794 17 24.89395385935442 26.521337463728123 29.874530530143424 18.710178146774034 18 20.775174125144517 25.779316604965874 34.719083471304096 18.726425798585513 19 20.76476757129832 28.0641929952479 30.559483190394282 20.6115562430595 20 17.599228169399897 35.820096868231545 29.649816106122678 16.930858856245877 21 22.12084224604316 28.133681919317656 34.573458856514435 15.172016978124752 22 20.01811411759809 24.655073094291435 36.11074184629721 19.216070941813264 23 19.06097971997642 25.6685371607967 36.25119675369231 19.01928636553457 24 19.662612810400645 28.678246811230483 32.79017836161901 18.86896201674985 25 21.81086121954069 27.975770857083777 31.661637951291954 18.55172997208358 26 18.475862837591965 30.67496236855851 28.644341587409013 22.204833206440515 27 19.926335026580354 27.92944490770394 32.879943280924586 19.26427678479112 28 17.09239542756166 30.392239799227365 29.5864368362465 22.928927936964485 29 19.580636021715456 29.145534648453182 29.058253874259286 22.215575455572072 30 23.0507181864935 27.23569703097662 28.7669375056229 20.946647276906987 31 21.080925391051437 27.685931547702967 30.979236575209846 20.253906486035746 32 23.717677579449003 27.17822599812279 27.820679635246933 21.283416787181274 33 23.74896438004466 27.21797231990955 28.939552021355592 20.093511278690197 34 19.945469657845937 26.828700067004778 32.37499043268437 20.850839842464914 35 20.186498872735232 30.49402260974886 28.62903388239654 20.690444635119366 36 23.504309656073467 29.49882036676724 26.733899718418797 20.2629702587405 37 20.80176119174512 30.471329608458447 28.838306323290674 19.88860287650576 38 22.34548953100683 28.39894833381002 30.14489951297328 19.11066262220987 39 20.444715686235014 29.670226379472638 28.29971680745727 21.58534112683508 40 24.04498048267611 27.242813771026274 30.23238170433839 18.479824041959226 41 20.244507018045635 27.533995861548522 28.57022006840127 23.65127705200457 42 19.394056582111737 28.774054245672552 31.059534887468228 20.772354284747482 43 19.635488631343467 28.722558588898156 30.642399925878482 20.999552853879898 44 22.02409486480208 27.995845435148368 28.416337349591725 21.56372235045782 45 19.364985370399467 27.89251842631421 27.58300737321125 25.159488830075077 46 21.205871176262853 27.891041367058623 28.49999261470372 22.403094841974802 47 18.429738305383346 27.282291536584747 31.58261528111795 22.705354876913965 48 19.40553736087109 29.802154626619558 29.44363206185387 21.34867595065548 49 21.979380252791977 27.872779543534982 29.689495288852363 20.458344914820678 50 19.960441667573043 27.98470035167438 29.61268820756174 22.442169773190837 51 19.451527614965563 28.259567651328076 28.793457433166424 23.495447300539933 52 19.581844524742756 29.31962622344147 29.12069319733646 21.977836054479315 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1064.0 1 2294.0 2 3524.0 3 20332.0 4 37140.0 5 21384.0 6 5628.0 7 6026.5 8 6425.0 9 8287.0 10 10149.0 11 12370.0 12 14591.0 13 15375.0 14 15357.0 15 14555.0 16 13266.0 17 11977.0 18 11097.5 19 10218.0 20 9940.5 21 9663.0 22 10379.0 23 11095.0 24 11819.5 25 12544.0 26 14342.0 27 16140.0 28 18591.0 29 21042.0 30 23524.0 31 26006.0 32 29213.5 33 32421.0 34 37489.5 35 42558.0 36 45882.5 37 49207.0 38 52041.0 39 58051.5 40 61228.0 41 65381.5 42 69535.0 43 73538.5 44 77542.0 45 81486.5 46 85431.0 47 95605.5 48 105780.0 49 116995.5 50 128211.0 51 124415.0 52 120619.0 53 115561.0 54 110503.0 55 97382.0 56 84261.0 57 75888.0 58 67515.0 59 67457.0 60 67399.0 61 52494.0 62 37589.0 63 30799.0 64 19997.0 65 15985.0 66 13523.0 67 11061.0 68 8632.0 69 6203.0 70 4951.5 71 3700.0 72 3279.0 73 2858.0 74 2115.5 75 1373.0 76 1166.5 77 960.0 78 627.0 79 294.0 80 257.5 81 221.0 82 170.0 83 119.0 84 70.5 85 22.0 86 29.5 87 37.0 88 19.5 89 2.5 90 3.0 91 3.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1489446.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.38050362138812 #Duplication Level Percentage of deduplicated Percentage of total 1 71.63095880297325 16.031369328934463 2 10.487716848503839 4.694407698160668 3 4.339298073483091 2.913470287436124 4 2.308939000896657 2.067008706845276 5 1.4321993127067647 1.6026670952291662 6 0.961945582084168 1.2917295950047818 7 0.7351148322840089 1.151656811624787 8 0.5751357010331755 1.0297461311810063 9 0.46190376656823706 0.9303875028371917 >10 5.120540549076889 26.851940159081796 >50 1.5140844222156695 23.945770725102243 >100 0.4231220389667909 12.02872487344812 >500 0.004821903577291605 0.7882635377153032 >1k 0.0033150587093879785 1.1913996004280925 >5k 3.013689735807253E-4 0.4568920342674308 >10k+ 6.027379471614506E-4 3.0245659127036317 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31033 2.0835263581224157 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 13810 0.9271903781674529 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6774 0.4547999726072647 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 2209 0.14831017707254912 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC 2014 0.1352180609434649 No Hit GGGGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 1903 0.1277656256084477 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT 1797 0.12064888555879166 No Hit CGTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 1635 0.10977235831309091 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1525 0.10238706203514596 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09661310312693444 0.0 2 0.0 0.0 0.0 0.27835853062145255 0.0 3 0.0 0.0 0.0 0.4878995277438726 0.0 4 0.0 0.0 0.0 0.7331585032287172 0.0 5 0.0 0.0 0.0 1.51412001509286 0.0 6 0.0 0.0 0.0 2.4163346640294443 0.0 7 0.0 0.0 0.0 3.1536557887966397 0.0 8 0.0 0.0 0.0 4.359137558528473 0.0 9 0.0 0.0 0.0 5.095787292724946 0.0 10 6.713905707222685E-5 0.0 0.0 5.903805844589196 0.0 11 6.713905707222685E-5 0.0 0.0 6.910690283501382 0.0 12 6.713905707222685E-5 0.0 0.0 7.491577405290289 0.0 13 6.713905707222685E-5 0.0 0.0 7.769264545341019 0.0 14 6.713905707222685E-5 0.0 0.0 8.094217581570597 0.0 15 6.713905707222685E-5 0.0 0.0 8.293486302960966 0.0 16 6.713905707222685E-5 0.0 0.0 8.569360688470747 0.0 17 6.713905707222685E-5 0.0 0.0 8.905660225345532 0.0 18 6.713905707222685E-5 0.0 0.0 9.264585624453655 0.0 19 6.713905707222685E-5 0.0 0.0 9.518438399243745 0.0 20 6.713905707222685E-5 0.0 0.0 9.832044934828117 0.0 21 6.713905707222685E-5 0.0 0.0 10.141623126988156 0.0 22 6.713905707222685E-5 0.0 0.0 10.492626117361757 0.0 23 6.713905707222685E-5 0.0 0.0 10.82469589364099 0.0 24 6.713905707222685E-5 0.0 0.0 11.071431928381426 0.0 25 6.713905707222685E-5 0.0 0.0 11.331125801136798 0.0 26 6.713905707222685E-5 0.0 0.0 11.559331456125298 0.0 27 6.713905707222685E-5 0.0 0.0 11.863404245605413 0.0 28 6.713905707222685E-5 0.0 0.0 12.112288730172159 0.0 29 1.342781141444537E-4 0.0 0.0 12.429453635781357 0.0 30 1.342781141444537E-4 0.0 0.0 13.178658373650338 0.0 31 1.342781141444537E-4 0.0 0.0 13.537785189929679 0.0 32 1.342781141444537E-4 0.0 0.0 13.885095532164309 0.0 33 2.0141717121668058E-4 0.0 0.0 14.195949366408719 0.0 34 2.0141717121668058E-4 0.0 0.0 14.51499416561594 0.0 35 2.0141717121668058E-4 0.0 0.0 14.83638883182069 0.0 36 2.0141717121668058E-4 0.0 0.0 15.106354980308115 0.0 37 2.0141717121668058E-4 0.0 0.0 15.41163627281553 0.0 38 2.0141717121668058E-4 0.0 0.0 15.775999935546505 0.0 39 2.0141717121668058E-4 0.0 0.0 16.97550632919891 0.0 40 2.0141717121668058E-4 0.0 0.0 17.367061310044136 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGA 20 6.3120597E-4 46.0 36 GCGAACA 20 6.3120597E-4 46.0 9 ATTACGC 25 3.4176468E-5 46.0 33 TCGATCA 20 6.3120597E-4 46.0 41 TATTGCG 40 5.6134013E-9 46.0 1 AACGGTT 30 1.8617775E-6 46.0 41 CCGTACG 25 3.4176468E-5 46.0 1 CTACGTC 25 3.4176468E-5 46.0 13 CCGCGTG 20 6.3120597E-4 46.0 35 CGATCCG 20 6.3120597E-4 46.0 40 CCACGCG 20 6.3120597E-4 46.0 1 TATCGGC 20 6.3120597E-4 46.0 35 ATCGCTC 25 3.4176468E-5 46.0 31 TACCGTA 20 6.3120597E-4 46.0 43 TAGTACG 40 5.6134013E-9 46.0 1 ACGGTTC 20 6.3120597E-4 46.0 11 ACGGTAC 25 3.4176468E-5 46.0 32 GAATCGC 35 1.0198346E-7 45.999996 18 CGTTTTT 7810 0.0 44.704224 1 TTGCGAG 130 0.0 42.461536 1 >>END_MODULE