##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933045.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1137704 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42245522561229 33.0 31.0 34.0 31.0 34.0 2 32.813890959335644 34.0 31.0 34.0 31.0 34.0 3 32.86595986302237 34.0 31.0 34.0 31.0 34.0 4 36.32086992750311 37.0 37.0 37.0 35.0 37.0 5 36.17831351564203 37.0 37.0 37.0 35.0 37.0 6 36.26569125185461 37.0 37.0 37.0 35.0 37.0 7 36.4825015997131 37.0 37.0 37.0 35.0 37.0 8 36.428949006068365 37.0 37.0 37.0 35.0 37.0 9 38.25887225499778 39.0 39.0 39.0 37.0 39.0 10 37.96849356247319 39.0 38.0 39.0 35.0 39.0 11 37.649454515409985 39.0 37.0 39.0 35.0 39.0 12 37.21686132772672 39.0 35.0 39.0 35.0 39.0 13 37.07229824277668 39.0 35.0 39.0 34.0 39.0 14 37.82161265144537 40.0 36.0 41.0 32.0 41.0 15 38.128649455394374 40.0 36.0 41.0 33.0 41.0 16 38.37924099765844 40.0 36.0 41.0 34.0 41.0 17 38.45211232447104 40.0 36.0 41.0 35.0 41.0 18 38.413833475139405 40.0 36.0 41.0 35.0 41.0 19 38.34766687996175 40.0 36.0 41.0 35.0 41.0 20 38.1544443897534 40.0 35.0 41.0 34.0 41.0 21 38.11066586739609 40.0 35.0 41.0 34.0 41.0 22 38.05668697657739 40.0 35.0 41.0 34.0 41.0 23 38.03348234690218 40.0 35.0 41.0 34.0 41.0 24 37.97082896781588 40.0 35.0 41.0 34.0 41.0 25 37.81097719617757 40.0 35.0 41.0 34.0 41.0 26 37.71677694725518 40.0 35.0 41.0 34.0 41.0 27 37.591595880826645 40.0 35.0 41.0 34.0 41.0 28 37.577531589939035 39.0 35.0 41.0 34.0 41.0 29 37.52766624710821 40.0 35.0 41.0 34.0 41.0 30 37.48618885052703 40.0 35.0 41.0 34.0 41.0 31 37.36313135929908 40.0 35.0 41.0 33.0 41.0 32 37.24026196620562 40.0 35.0 41.0 33.0 41.0 33 37.13971032887289 39.0 35.0 41.0 33.0 41.0 34 36.97822983834108 39.0 35.0 41.0 33.0 41.0 35 36.904904087530674 39.0 35.0 41.0 33.0 41.0 36 36.821116916175036 39.0 35.0 41.0 32.0 41.0 37 36.703414948000535 39.0 35.0 41.0 32.0 41.0 38 36.68782917173535 39.0 35.0 41.0 32.0 41.0 39 36.67670852875616 39.0 35.0 41.0 32.0 41.0 40 36.60551514277879 39.0 35.0 41.0 32.0 41.0 41 36.43638327719688 39.0 35.0 41.0 31.0 41.0 42 36.45768495144607 39.0 35.0 41.0 31.0 41.0 43 36.399820164120015 39.0 35.0 41.0 31.0 41.0 44 36.36107282737865 38.0 35.0 41.0 31.0 41.0 45 36.30486400680669 38.0 35.0 41.0 31.0 41.0 46 36.24965984122408 38.0 35.0 41.0 31.0 41.0 47 36.15080460295472 38.0 35.0 41.0 31.0 41.0 48 36.02548905514967 38.0 35.0 41.0 31.0 41.0 49 36.00812074142308 38.0 35.0 41.0 31.0 41.0 50 35.90270228460127 37.0 35.0 41.0 31.0 41.0 51 35.822705202759245 37.0 35.0 40.0 31.0 41.0 52 35.585204060107024 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 2.0 13 8.0 14 8.0 15 23.0 16 54.0 17 153.0 18 294.0 19 473.0 20 874.0 21 1428.0 22 2158.0 23 3209.0 24 4952.0 25 7545.0 26 9984.0 27 11552.0 28 12792.0 29 13741.0 30 15830.0 31 18951.0 32 24243.0 33 34256.0 34 89819.0 35 130112.0 36 76712.0 37 85587.0 38 134749.0 39 455101.0 40 3093.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.205543796980585 22.29138686336692 26.02979333816177 13.473276001490722 2 37.72976099231434 22.959047344476243 26.02328901014675 13.287902653062659 3 33.854412043905974 23.378928086743127 29.541778880974313 13.224880988376588 4 30.293292455682675 27.24777270713648 28.226058799125255 14.232876038055592 5 25.959827863838047 30.113280783050776 28.668880482093762 15.258010871017417 6 27.242411031340314 37.98299030327748 25.543023492929617 9.231575172452589 7 86.1616026664229 1.881772411804828 9.268843214052161 2.6877817077201103 8 83.96876516211597 2.2688678250230288 9.71931187725454 4.0430551356064495 9 78.26121732893617 3.976341825290234 12.644765246496453 5.11767559927714 10 48.871235400420495 20.42736950911661 17.780108007003577 12.921287083459317 11 33.08690133813364 23.601921062068868 27.135177515417013 16.17600008438047 12 32.831650411706384 18.12923220802599 30.625804251369427 18.413313128898203 13 28.613857382939674 21.00335412374396 33.9781700688404 16.404618424475963 14 18.78854253830522 22.765675430516197 37.88648013894651 20.559301892232074 15 15.933757813983252 28.13411924366971 38.041529255412655 17.890593686934388 16 26.86929113372195 25.332423899362222 31.453611835767475 16.344673131148348 17 25.800471827470062 24.645514123181425 26.727250673285845 22.82676337606267 18 22.86658041107353 23.628553648400636 33.678355705877806 19.82651023464803 19 22.981988285177867 26.446597709070197 27.438068249738066 23.133345756013867 20 18.480993298784217 35.486822583026864 26.636102184751042 19.396081933437873 21 23.700716530837546 28.115485222869918 32.150278103970805 16.033520142321727 22 20.951143706974747 23.220626806269472 34.36113435480582 21.46709513194996 23 21.770425347893653 24.76259202745178 32.96164907568225 20.505333548972317 24 22.196195143903864 28.19344926272563 29.889760429777866 19.720595163592638 25 23.476756695942 25.116286837349612 30.17410503962366 21.232851427084725 26 19.37340468170983 29.138422647718563 26.255862684845972 25.23230998572564 27 22.939885945729294 25.90893589193674 30.48147848649561 20.669699675838356 28 17.935508708767834 28.916220739313562 27.86963920316708 25.278631348751517 29 21.699141428702017 27.039985795953957 27.2169210972274 24.043951678116628 30 26.4247115242629 23.820870806466356 26.28003417409098 23.474383495179765 31 23.65448306413619 24.54091749699395 30.28590916442238 21.518690274447483 32 25.949368201219297 23.90270228460127 25.778234057364656 24.369695456814778 33 25.318360487437857 23.543030524635583 28.506887555989955 22.6317214319366 34 18.579173493281203 22.65158600127977 35.192106206886855 23.57713429855217 35 21.145921962127233 26.93231279840802 29.42461308037943 22.497152159085314 36 25.243912300563238 24.991825641818963 25.391226540470985 24.373035517146814 37 19.319875820072706 28.107222968364354 29.754487986330364 22.81841322523257 38 21.589095230393845 25.63417198146442 31.56233958920774 21.214393198933994 39 19.75830268681485 26.81839916182065 26.673370226350613 26.74992792501389 40 25.876414251861647 23.757233867508596 29.483239928839133 20.883111951790625 41 18.809989241489877 25.84644160519784 26.673282330026087 28.670286823286194 42 18.69589981225345 26.207783395329542 30.71457953914199 24.38173725327502 43 19.965034842103044 26.2810889299853 30.944164738807284 22.809711489104373 44 23.48009675627404 24.502682595824574 27.975730066871524 24.041490581029866 45 19.739229184392425 25.062933768361546 26.395354151870787 28.80248289537525 46 22.688941939203872 24.654391651958683 28.169014084507044 24.487652324330405 47 19.166145148474474 23.418481432780407 32.1377089295634 25.277664489181724 48 18.681133229732865 28.768203328809605 29.1781517864049 23.372511655052634 49 23.643320230921226 24.895579166461577 29.246886712185244 22.214213890431957 50 21.07876917018838 25.09519171946306 29.187029315182155 24.639009795166405 51 20.01583891767982 25.615977442287274 27.43859562768523 26.929588012347676 52 20.183457208553367 26.236173908151855 29.39384936679488 24.1865195164999 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1053.0 1 2363.5 2 3674.0 3 11332.0 4 18990.0 5 11178.5 6 3367.0 7 3926.5 8 4486.0 9 5911.5 10 7337.0 11 8845.0 12 10353.0 13 10891.5 14 10435.0 15 9440.0 16 8305.5 17 7171.0 18 6456.5 19 5742.0 20 5767.5 21 5793.0 22 5971.5 23 6150.0 24 6312.5 25 6475.0 26 6524.5 27 6574.0 28 7857.0 29 9140.0 30 10055.0 31 10970.0 32 13024.0 33 15078.0 34 17637.0 35 20196.0 36 19460.5 37 18725.0 38 23934.5 39 30536.5 40 31929.0 41 35464.0 42 38999.0 43 46920.5 44 54842.0 45 64250.5 46 73659.0 47 85889.5 48 98120.0 49 108369.5 50 118619.0 51 107904.5 52 97190.0 53 87760.5 54 78331.0 55 76232.5 56 74134.0 57 67936.0 58 61738.0 59 65135.5 60 68533.0 61 52280.0 62 36027.0 63 32286.5 64 23839.0 65 19132.0 66 17322.5 67 15513.0 68 13156.0 69 10799.0 70 9165.5 71 7532.0 72 6354.5 73 5177.0 74 4049.0 75 2921.0 76 2471.5 77 2022.0 78 1658.0 79 1294.0 80 866.0 81 438.0 82 431.0 83 424.0 84 353.5 85 283.0 86 235.0 87 187.0 88 100.5 89 11.5 90 9.0 91 6.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1137704.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.305882911348323 #Duplication Level Percentage of deduplicated Percentage of total 1 70.78356998476575 15.081064541426487 2 11.675475975769261 4.975126481480005 3 4.771135715930367 3.0495977675329335 4 2.4501142467423875 2.0880738904207883 5 1.503333394642082 1.6014922641482001 6 0.9836306820679765 1.257427208409 7 0.7666253768018999 1.1433541360506698 8 0.5365980096287992 0.9146155490891006 9 0.44637975781537587 0.8559463368609379 >10 3.9495754248457513 18.623783782901583 >50 1.3315110995200472 20.421111332957885 >100 0.7867456062179405 22.86327936881559 >500 0.008272824460756474 1.1931909144938433 >1k 0.005790977122529532 2.0023997908423525 >5k 4.136412230378237E-4 0.8416406849410002 >10k+ 8.272824460756474E-4 3.0878959496296092 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 19366 1.702200220795567 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15672 1.3775111979917447 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 9550 0.8394098992356537 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 2292 0.20145837581655685 No Hit CTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCTT 2217 0.19486615147700984 TruSeq Adapter, Index 22 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCT 2186 0.19214136541666374 TruSeq Adapter, Index 23 (95% over 24bp) GGGGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCT 1970 0.17315575931876834 TruSeq Adapter, Index 23 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGCT 1873 0.16462981583962086 TruSeq Adapter, Index 23 (95% over 24bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1734 0.15241222673032703 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCCGTTCTACTCG 1587 0.1394914670248149 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1454 0.12780125586268484 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1443 0.12683439629288462 No Hit CGCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCGTCTTCTGC 1424 0.12516436612686604 TruSeq Adapter, Index 22 (95% over 21bp) GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCCGTTCTACT 1309 0.11505628880622727 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTTCTACTCGTATGCCG 1185 0.10415714456484287 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20005203462412016 0.0 2 0.0 0.0 0.0 0.686821879856272 0.0 3 0.0 0.0 0.0 1.1022199095722613 0.0 4 0.0 0.0 0.0 1.592241918811923 0.0 5 0.0 0.0 0.0 3.0450802669235584 0.0 6 0.0 0.0 0.0 4.4539704527715465 0.0 7 0.0 0.0 0.0 5.610598187226203 0.0 8 0.0 0.0 0.0 7.606899509890094 0.0 9 0.0 0.0 0.0 8.648031473915887 0.0 10 0.0 0.0 0.0 9.702435782945301 0.0 11 0.0 0.0 0.0 11.330012024217195 0.0 12 0.0 0.0 0.0 12.239035812478466 0.0 13 0.0 0.0 0.0 12.655137012790673 0.0 14 0.0 0.0 0.0 12.923660284221555 0.0 15 0.0 0.0 0.0 13.198160505720292 0.0 16 0.0 0.0 0.0 13.685018247276972 0.0 17 0.0 0.0 0.0 14.219515796727444 0.0 18 0.0 0.0 0.0 14.828461533052534 0.0 19 0.0 0.0 0.0 15.183914269440908 0.0 20 0.0 0.0 0.0 15.675342619873007 0.0 21 0.0 0.0 0.0 16.132579300063988 0.0 22 0.0 0.0 0.0 16.608450001054756 0.0 23 0.0 0.0 0.0 17.03668089415173 0.0 24 8.789632452729356E-5 0.0 0.0 17.343526963076513 0.0 25 8.789632452729356E-5 0.0 0.0 17.716295275396764 0.0 26 1.7579264905458712E-4 0.0 0.0 18.031930976774277 0.0 27 1.7579264905458712E-4 0.0 0.0 18.47281894060318 0.0 28 1.7579264905458712E-4 0.0 0.0 18.814911435663408 0.0 29 1.7579264905458712E-4 0.0 0.0 19.238044341937798 0.0 30 1.7579264905458712E-4 0.0 0.0 20.419986217856316 0.0 31 1.7579264905458712E-4 0.0 0.0 20.92969700379009 0.0 32 1.7579264905458712E-4 0.0 0.0 21.260714561959876 0.0 33 1.7579264905458712E-4 0.0 0.0 21.65484168114026 0.0 34 1.7579264905458712E-4 0.0 0.0 22.077535105792016 0.0 35 1.7579264905458712E-4 0.0 0.0 22.511215571009682 0.0 36 1.7579264905458712E-4 0.0 0.0 22.808568836885517 0.0 37 1.7579264905458712E-4 0.0 0.0 23.162703128405983 0.0 38 1.7579264905458712E-4 0.0 0.0 23.6261804476384 0.0 39 1.7579264905458712E-4 0.0 0.0 25.171749418126332 0.0 40 1.7579264905458712E-4 0.0 0.0 25.570007664559498 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTC 20 6.311426E-4 46.000004 45 AACCGTT 20 6.311426E-4 46.000004 37 TCGTTAA 20 6.311426E-4 46.000004 12 CGTATTA 20 6.311426E-4 46.000004 31 TCCGATC 20 6.311426E-4 46.000004 13 TCCGACC 20 6.311426E-4 46.000004 36 TTACTCG 20 6.311426E-4 46.000004 37 ATTCGAT 20 6.311426E-4 46.000004 14 TAACCGC 20 6.311426E-4 46.000004 26 GTTCGTA 20 6.311426E-4 46.000004 30 GTATCGG 20 6.311426E-4 46.000004 1 CCGGTAA 20 6.311426E-4 46.000004 17 CCAACCG 20 6.311426E-4 46.000004 13 GACGATA 20 6.311426E-4 46.000004 29 ACGAGCC 20 6.311426E-4 46.000004 39 TATCGTT 20 6.311426E-4 46.000004 27 TGTCGAT 20 6.311426E-4 46.000004 12 CCGTTGC 20 6.311426E-4 46.000004 22 TCGAACA 20 6.311426E-4 46.000004 28 GATCGTC 55 1.8189894E-12 46.0 9 >>END_MODULE