##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933043.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1123452 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42948519384896 33.0 31.0 34.0 31.0 34.0 2 32.7467377333433 34.0 31.0 34.0 31.0 34.0 3 32.78417769517523 34.0 31.0 34.0 31.0 34.0 4 36.261431730060565 37.0 37.0 37.0 35.0 37.0 5 36.23329345624023 37.0 37.0 37.0 35.0 37.0 6 36.406558535656174 37.0 37.0 37.0 35.0 37.0 7 36.49587521318223 37.0 37.0 37.0 35.0 37.0 8 36.32901094127742 37.0 37.0 37.0 35.0 37.0 9 37.965697688908826 39.0 38.0 39.0 35.0 39.0 10 37.83656177566999 39.0 38.0 39.0 35.0 39.0 11 37.3152666958624 39.0 35.0 39.0 35.0 39.0 12 37.106658762457144 39.0 35.0 39.0 34.0 39.0 13 36.756799578442156 39.0 35.0 39.0 33.0 39.0 14 38.291415209550564 40.0 36.0 41.0 33.0 41.0 15 38.48079935769397 40.0 36.0 41.0 35.0 41.0 16 38.53213399415373 40.0 36.0 41.0 35.0 41.0 17 38.56251446434739 40.0 36.0 41.0 35.0 41.0 18 38.45193831156115 40.0 36.0 41.0 35.0 41.0 19 38.28443938859871 40.0 36.0 41.0 34.0 41.0 20 38.16808016719895 40.0 35.0 41.0 34.0 41.0 21 38.166319522329395 40.0 35.0 41.0 34.0 41.0 22 38.141551218921684 40.0 35.0 41.0 34.0 41.0 23 38.07201998839292 40.0 35.0 41.0 34.0 41.0 24 37.99657573265257 40.0 35.0 41.0 34.0 41.0 25 37.91464432837362 40.0 35.0 41.0 34.0 41.0 26 37.81504772789581 40.0 35.0 41.0 34.0 41.0 27 37.74718902098176 40.0 35.0 41.0 34.0 41.0 28 37.71016207189982 40.0 35.0 41.0 34.0 41.0 29 37.64155477937642 40.0 35.0 41.0 34.0 41.0 30 37.52206324791803 40.0 35.0 41.0 34.0 41.0 31 37.46943260593243 39.0 35.0 41.0 34.0 41.0 32 37.395327971288495 40.0 35.0 41.0 34.0 41.0 33 37.20567500881212 39.0 35.0 41.0 33.0 41.0 34 37.09182323766392 39.0 35.0 41.0 33.0 41.0 35 36.92623716901122 39.0 35.0 41.0 33.0 41.0 36 36.84729476648758 39.0 35.0 41.0 33.0 41.0 37 36.71117769161477 39.0 35.0 41.0 32.0 41.0 38 36.691825729982234 39.0 35.0 41.0 32.0 41.0 39 36.585839893471196 39.0 35.0 41.0 32.0 41.0 40 36.498374652410604 39.0 35.0 41.0 32.0 41.0 41 36.501109971765594 38.0 35.0 41.0 32.0 41.0 42 36.49274735369201 38.0 35.0 41.0 32.0 41.0 43 36.400893852162795 38.0 35.0 41.0 32.0 41.0 44 36.31742433143561 38.0 35.0 41.0 32.0 41.0 45 36.293020084525196 38.0 35.0 41.0 32.0 41.0 46 36.219213637965844 38.0 35.0 41.0 32.0 41.0 47 36.08589953108811 37.0 35.0 41.0 31.0 41.0 48 36.05404058206314 37.0 35.0 41.0 31.0 41.0 49 35.96367535061578 37.0 35.0 40.0 31.0 41.0 50 35.85709224782189 37.0 35.0 40.0 31.0 41.0 51 35.74385376500287 37.0 35.0 40.0 31.0 41.0 52 35.49964128418482 36.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 2.0 13 5.0 14 12.0 15 17.0 16 39.0 17 103.0 18 213.0 19 410.0 20 699.0 21 1185.0 22 1780.0 23 2847.0 24 4601.0 25 7566.0 26 9975.0 27 10815.0 28 11042.0 29 12288.0 30 14723.0 31 18193.0 32 23324.0 33 32326.0 34 82727.0 35 144616.0 36 92490.0 37 89922.0 38 122812.0 39 431006.0 40 7711.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.44971747791628 23.526861850795584 24.966531725431974 19.056888945856166 2 30.105692098994886 23.60563691194639 26.079885923030087 20.208785066028632 3 27.048151589921066 24.226491207457016 27.87391005579233 20.851447146829592 4 22.781836696182836 26.721568878777198 27.500952421643294 22.995642003396675 5 21.102548217458335 37.38753413585984 23.32320383959439 18.18671380708744 6 84.11120368293439 2.6265474626419283 10.645047585477617 2.61720126894607 7 86.202614797962 1.7123116964498708 8.119617037488029 3.965456468100106 8 77.72072149054877 3.997767594877218 12.82689425093373 5.45461666364028 9 40.35250282166038 28.10596269355522 17.057604597259164 14.483929887525235 10 34.19807877862161 19.311105414383526 28.335434001630688 18.155381805364183 11 32.165504178193636 19.06463293491845 30.968924351018114 17.8009385358698 12 22.631852540206435 27.28590095527001 33.858767441777665 16.223479062745895 13 15.107454524091818 34.084055215532125 34.17351164090678 16.63497861946928 14 12.724175131647813 29.473978416523362 40.51744088755016 17.28440556427867 15 17.499546042020487 21.640799962971272 42.214531639981054 18.645122355027183 16 17.536663782698326 25.51208240316453 29.029722676180203 27.92153113795694 17 20.139979278153405 30.110765747001206 30.65774060663028 19.09151436821511 18 22.13036248989721 35.36751013839488 26.032798909076664 16.469328462631246 19 18.990397453562768 30.93670223560953 25.605010271911926 24.467890038915773 20 18.20549520584769 31.72320668795819 30.35973054478518 19.711567561408945 21 14.535378458536725 27.95339720789139 30.446605640472402 27.064618693099483 22 12.047599719436167 34.761431730060565 28.108900068716775 25.082068481786497 23 13.035625910141244 36.6787366082396 32.05958064964057 18.22605683197858 24 22.82135774381104 28.575675685298524 27.94672135525149 20.65624521563894 25 13.754481722405584 32.148770040909625 25.961945859725205 28.134802376959584 26 12.74420268956751 31.12531732552882 33.471835022769106 22.658644962134563 27 16.573204729708078 29.246910415398254 33.20880642875708 20.971078426136586 28 14.421354895447248 35.12700142062144 27.280382250421027 23.17126143351029 29 18.952745644673737 31.678968037797787 30.88881411933932 18.479472198189153 30 24.58209162474231 28.346293388591594 26.08611671882733 20.985498267838768 31 23.183634013736235 31.69303183402584 25.64853683112407 19.47479732111385 32 21.41613526879653 29.45973659755824 24.370956658584433 24.753171475060796 33 14.42642854345357 27.437220281774387 31.151486667877222 26.98486450689482 34 16.60711806111877 29.165910070034144 29.294976554405526 24.93199531444156 35 25.948861188551003 27.18104556313932 27.67123116964499 19.198862078664686 36 19.724563221214613 31.537350950463395 27.621295791898543 21.116790036423453 37 20.46638396656021 30.93937257666549 28.60229008448959 19.99195337228471 38 18.40461363725375 27.259642601553068 25.970579962472804 28.36516379872037 39 25.32676073388093 25.177132623378657 29.589693195614945 19.906413447125466 40 18.171759897174066 23.71378572471276 32.93207008399113 25.182384294122045 41 18.245639333055617 31.231329865450412 26.074456229549636 24.448574571944327 42 18.818516500927498 25.242644990618203 29.329690988133006 26.609147520321297 43 20.978644392461806 27.995143539732897 31.578563214093702 19.4476488537116 44 18.795996624688904 31.734778165867343 25.67052263915147 23.798702570292278 45 21.44203757703934 28.677682713636187 27.27290529546434 22.607374413860136 46 23.623706219758386 27.419507019436523 27.91930585374364 21.03748090706145 47 17.64240928851433 31.441218672448844 29.169114479301296 21.74725755973553 48 20.04064259087171 27.44710054368144 27.80643943844508 24.70581742700178 49 17.236339425271396 27.26453822682233 31.788630043829198 23.71049230407708 50 16.751227466772058 28.99037965128906 31.288119118573825 22.970273763365057 51 16.478229599484447 26.58698368955683 28.494408305828824 28.440378405129902 52 17.876865233227587 24.661044708630186 30.670024175487693 26.79206588265453 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1943.0 1 1886.5 2 1830.0 3 13577.0 4 25324.0 5 14314.0 6 3304.0 7 4373.0 8 5442.0 9 7542.5 10 9643.0 11 11933.5 12 14224.0 13 14497.0 14 13964.5 15 13159.0 16 11571.5 17 9984.0 18 8910.0 19 7836.0 20 7100.0 21 6364.0 22 5997.0 23 5630.0 24 5607.0 25 5584.0 26 6070.0 27 6556.0 28 7029.5 29 7503.0 30 8224.0 31 8945.0 32 10877.5 33 12810.0 34 15972.5 35 19135.0 36 21069.0 37 23003.0 38 25725.0 39 29128.5 40 29810.0 41 37536.5 42 45263.0 43 58592.5 44 71922.0 45 85950.0 46 99978.0 47 114281.0 48 128584.0 49 140556.0 50 152528.0 51 133972.5 52 115417.0 53 92990.5 54 70564.0 55 59911.5 56 49259.0 57 45661.0 58 42063.0 59 37604.5 60 33146.0 61 27071.0 62 20996.0 63 17286.0 64 10744.5 65 7913.0 66 5735.0 67 3557.0 68 3004.5 69 2452.0 70 2163.0 71 1874.0 72 1766.0 73 1658.0 74 1237.5 75 817.0 76 573.0 77 329.0 78 250.0 79 171.0 80 125.0 81 79.0 82 57.5 83 36.0 84 20.0 85 4.0 86 9.0 87 14.0 88 8.0 89 1.0 90 0.0 91 2.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1123452.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.51628691903826 #Duplication Level Percentage of deduplicated Percentage of total 1 71.22615745779204 18.886532272914106 2 11.970772616024286 6.348408826581324 3 4.878037392643064 3.880423173153623 4 2.574242579837985 2.730374193847571 5 1.526493134016676 2.023846496076405 6 1.006978217065457 1.602079399495755 7 0.7147624275475887 1.326699192546011 8 0.5602393612704014 1.1884374117427756 9 0.43467238114072904 1.0373307816698214 >10 3.9082030503781393 22.162925442618267 >50 0.8265965418377341 15.825312521384975 >100 0.356326398147667 13.683004722454806 >500 0.009101998817390157 1.6731002364252074 >1k 0.006067999211593438 3.1067264367664738 >5k 6.742221346214931E-4 1.4840417868852538 >10k+ 6.742221346214931E-4 3.0407571054376388 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23322 2.0759231369030453 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 10695 0.9519765864496214 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 8709 0.7752000085450914 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 7893 0.7025667318229885 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3993 0.3554223945482317 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3028 0.2695264239148624 No Hit CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCTT 2871 0.2555516390553402 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT 2625 0.23365484239647089 No Hit CGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 2361 0.21015584110402583 No Hit GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT 2001 0.17811174843250982 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 1968 0.17517437327095417 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCG 1881 0.16743038420867112 No Hit CGTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 1783 0.1587072700925362 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1768 0.1573720995645564 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTT 1718 0.15292153113795695 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 1648 0.14669073534071772 No Hit ACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 1361 0.12114447257203691 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 1223 0.10886090371462244 No Hit GGACAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 1209 0.10761474455517459 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1183 0.10530044897334287 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2631176053805592 0.0 2 0.0 0.0 0.0 0.8289628751384127 0.0 3 0.0 0.0 0.0 1.6663818302873643 0.0 4 0.0 0.0 0.0 2.2908855919077986 0.0 5 0.0 0.0 0.0 5.288788484065185 0.0 6 0.0 0.0 0.0 6.339300655479718 0.0 7 0.0 0.0 0.0 8.623332372010553 0.0 8 0.0 0.0 0.0 11.534360168480719 0.0 9 0.0 0.0 0.0 13.876160263188815 0.0 10 0.0 0.0 0.0 15.527944229036933 0.0 11 0.0 0.0 0.0 16.93307769268291 0.0 12 0.0 0.0 0.0 17.901343359573886 0.0 13 0.0 0.0 0.0 18.359128827933905 0.0 14 0.0 0.0 0.0 18.621000274155016 0.0 15 0.0 0.0 0.0 19.25217988841535 0.0 16 0.0 0.0 0.0 20.157781551859802 0.0 17 0.0 0.0 0.0 21.170107846174112 0.0 18 0.0 0.0 0.0 21.69545294324991 0.0 19 0.0 0.0 0.0 22.248836621413286 0.0 20 0.0 0.0 0.0 22.862391984704285 0.0 21 0.0 0.0 0.0 23.51680356615147 0.0 22 0.0 0.0 0.0 24.14789416904327 0.0 23 0.0 0.0 0.0 24.592862000334684 0.0 24 0.0 0.0 0.0 24.92612056411845 0.0 25 0.0 0.0 0.0 25.29080014099401 0.0 26 0.0 0.0 0.0 25.765052712532444 0.0 27 0.0 0.0 0.0 26.162399461659245 0.0 28 0.0 0.0 0.0 26.64510811320822 0.0 29 8.901136853198891E-5 0.0 0.0 27.048596646763723 0.0 30 8.901136853198891E-5 0.0 0.0 27.461520385383622 0.0 31 8.901136853198891E-5 0.0 0.0 27.762378811021744 0.0 32 8.901136853198891E-5 0.0 0.0 28.154918946247815 0.0 33 8.901136853198891E-5 0.0 0.0 28.59205377710841 0.0 34 8.901136853198891E-5 0.0 0.0 29.151579239700496 0.0 35 8.901136853198891E-5 0.0 0.0 29.51919619173761 0.0 36 8.901136853198891E-5 0.0 0.0 29.925355066349073 0.0 37 8.901136853198891E-5 0.0 0.0 30.498321245589487 0.0 38 8.901136853198891E-5 0.0 0.0 31.89028102669273 0.0 39 1.7802273706397781E-4 0.0 0.0 32.383493019728476 0.0 40 1.7802273706397781E-4 0.0 0.0 32.809857474996704 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTGG 55 1.8189894E-12 46.000004 1 CCTACGG 55 1.8189894E-12 46.000004 1 ACTACGG 70 0.0 46.000004 1 GCGATCG 35 1.01954356E-7 46.000004 8 TGGGCGC 140 0.0 46.000004 5 GCTACGG 220 0.0 46.000004 1 GTTATCT 215 0.0 46.000004 24 ATTTAGG 160 0.0 46.0 1 TCGCCCA 30 1.8613646E-6 46.0 45 CGGGTAC 100 0.0 46.0 5 GCGACTA 20 6.311393E-4 46.0 28 CCCTCGC 20 6.311393E-4 46.0 42 CGACGCG 20 6.311393E-4 46.0 46 GCAACCG 20 6.311393E-4 46.0 8 GGCGTGC 20 6.311393E-4 46.0 19 CGGCACT 30 1.8613646E-6 46.0 39 TCCCTCG 20 6.311393E-4 46.0 41 ATTCGGC 80 0.0 46.0 16 CCGTCGG 25 3.4171055E-5 46.0 34 GTGGACG 20 6.311393E-4 46.0 12 >>END_MODULE