##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933040.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3127703 Sequences flagged as poor quality 0 Sequence length 52 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54483881621753 33.0 31.0 34.0 31.0 34.0 2 32.92016601320522 34.0 31.0 34.0 31.0 34.0 3 32.99408223862688 34.0 33.0 34.0 31.0 34.0 4 36.424042180475574 37.0 37.0 37.0 35.0 37.0 5 36.407967444479226 37.0 37.0 37.0 35.0 37.0 6 36.526459513579134 37.0 37.0 37.0 35.0 37.0 7 36.56349212185428 37.0 37.0 37.0 35.0 37.0 8 36.425467187901155 37.0 37.0 37.0 35.0 37.0 9 38.089235135177475 39.0 39.0 39.0 35.0 39.0 10 38.01181857740329 39.0 39.0 39.0 35.0 39.0 11 37.75083599689612 39.0 37.0 39.0 35.0 39.0 12 37.67524985588465 39.0 38.0 39.0 35.0 39.0 13 37.59459449954168 39.0 38.0 39.0 35.0 39.0 14 39.08000567828851 41.0 39.0 41.0 35.0 41.0 15 39.13582012102812 41.0 39.0 41.0 35.0 41.0 16 39.12713898985933 41.0 39.0 41.0 35.0 41.0 17 39.098226078371255 41.0 38.0 41.0 35.0 41.0 18 39.00520349918135 41.0 38.0 41.0 35.0 41.0 19 38.87057274939468 41.0 38.0 41.0 35.0 41.0 20 38.73215487531905 41.0 37.0 41.0 35.0 41.0 21 38.69901074366716 40.0 37.0 41.0 35.0 41.0 22 38.66229114465152 40.0 37.0 41.0 35.0 41.0 23 38.61670305652423 40.0 37.0 41.0 35.0 41.0 24 38.56421917298414 40.0 37.0 41.0 35.0 41.0 25 38.5152081255797 40.0 36.0 41.0 35.0 41.0 26 38.41241383852623 40.0 36.0 41.0 35.0 41.0 27 38.333935159444486 40.0 36.0 41.0 35.0 41.0 28 38.32412412559633 40.0 36.0 41.0 35.0 41.0 29 38.284939778489196 40.0 36.0 41.0 35.0 41.0 30 38.20677091143245 40.0 36.0 41.0 34.0 41.0 31 38.09956380129443 40.0 35.0 41.0 34.0 41.0 32 37.94483939171974 40.0 35.0 41.0 34.0 41.0 33 37.71577736121365 40.0 35.0 41.0 33.0 41.0 34 37.53180784748424 40.0 35.0 41.0 33.0 41.0 35 37.39859922761208 40.0 35.0 41.0 33.0 41.0 36 37.312582108979015 40.0 35.0 41.0 33.0 41.0 37 37.19966249992407 40.0 35.0 41.0 33.0 41.0 38 37.16048614590324 40.0 35.0 41.0 33.0 41.0 39 37.09674799685264 40.0 35.0 41.0 33.0 41.0 40 37.05360131700484 40.0 35.0 41.0 33.0 41.0 41 37.00564247948095 40.0 35.0 41.0 33.0 41.0 42 36.96095441287104 40.0 35.0 41.0 33.0 41.0 43 36.8809349864741 40.0 35.0 41.0 33.0 41.0 44 36.77509661243411 39.0 35.0 41.0 32.0 41.0 45 36.70014224496379 39.0 35.0 41.0 32.0 41.0 46 36.62115648448718 39.0 35.0 41.0 32.0 41.0 47 36.51900803880675 39.0 35.0 41.0 32.0 41.0 48 36.432503981356284 39.0 35.0 41.0 31.0 41.0 49 36.344260948050376 39.0 35.0 41.0 31.0 41.0 50 36.2486741867754 38.0 35.0 41.0 31.0 41.0 51 36.14262159802257 38.0 35.0 41.0 31.0 41.0 52 35.887856999209966 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 4.0 12 8.0 13 9.0 14 27.0 15 38.0 16 102.0 17 219.0 18 458.0 19 843.0 20 1535.0 21 2584.0 22 4192.0 23 6515.0 24 11525.0 25 20214.0 26 29652.0 27 33259.0 28 33188.0 29 33104.0 30 35481.0 31 40931.0 32 51241.0 33 68523.0 34 157350.0 35 264673.0 36 191394.0 37 254671.0 38 416344.0 39 1454774.0 40 14841.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.057229858461625 20.991539158289648 23.891718619063255 21.059512364185473 2 30.51165663747485 23.08844541825103 25.484836635703584 20.91506130857054 3 27.907349259184777 24.065008730048856 27.52489606589884 20.502745944867527 4 23.659343614147506 26.925830233880905 25.694830998979125 23.719995152992468 5 22.21793437548258 37.46893487009476 23.102033664961155 17.2110970894615 6 86.73732768104901 2.6368552257039752 8.458251950392988 2.1675651428540372 7 87.91026513706704 2.1754303397733095 7.415377994649748 2.4989265285099 8 81.3393726961927 4.51647742768415 10.337170760778756 3.8069791153443915 9 38.36710199146147 30.612849110033785 16.569380148946365 14.450668749558382 10 29.361003906061413 23.18909436094156 27.621900161236535 19.82800157176049 11 27.310937131818463 20.65550981023454 32.08645450031541 19.94709855763159 12 23.262343003795436 22.953937761993387 33.35217570210471 20.43154353210647 13 19.148141623421406 28.0613280736694 32.85027382715047 19.940256475758726 14 17.9903590590283 26.600927261955498 35.74859889190246 19.660114787113738 15 21.91448484718658 22.817351903297723 35.5043621469174 19.763801102598297 16 21.897123863742816 23.421181614750505 30.39585280315938 24.2858417183473 17 21.860387639107678 25.997225439883522 31.404164653741102 20.7382222672677 18 24.37123985237729 28.41628505008308 27.94072838757388 19.271746709965747 19 24.323281334576844 25.212624088668267 27.9314564074658 22.53263816928909 20 24.66871055212084 25.56032334272148 29.5330470955842 20.23791900957348 21 21.427705891512076 23.60252875672658 30.02522937759755 24.944535974163788 22 20.03236880228078 28.10263634366818 28.951246329974424 22.913748524076617 23 19.603555708454415 28.19676292793785 30.614639561365003 21.58504180224273 24 24.360081503902382 25.259879214874303 28.69700224094168 21.68303704028164 25 20.069680529129524 26.8714772470404 27.946387492674337 25.112454731155744 26 18.813391169174313 26.179307945799202 31.437032224607 23.570268660419483 27 20.46965456758522 25.31071524374277 32.18882994964675 22.030800239025254 28 20.92708291036585 27.826746976934828 28.52045095074564 22.725719161953677 29 21.955505366078558 26.00956676513083 30.4087056859299 21.62622218286071 30 25.264195481476342 25.512045101469035 26.904632569013103 22.319126848041517 31 25.573272142527596 27.426932800205133 25.681210779923795 21.31858427734347 32 23.822306657633412 27.265536401634044 24.980217111407317 23.931939829325227 33 21.661967264794644 26.330281359834995 27.64798959491998 24.35976178045038 34 21.42460457402765 27.09755369995169 27.872595319952055 23.605246406068606 35 26.20485384961424 27.40304945834051 25.632357036457748 20.759739655587502 36 22.783301355659408 28.264192603965277 26.7635386096442 22.188967430731115 37 22.77012874943689 28.812518324150343 27.203925692433074 21.213427233979697 38 20.945722787617623 26.03674325855108 27.299523004581953 25.718010949249337 39 22.556649400534514 24.70688553228999 30.82632845893616 21.910136608239338 40 19.703789010657342 24.572473793067946 31.948238052014528 23.77549914426018 41 20.847439798471914 28.376863148451115 27.228544398237304 23.54715265483967 42 20.83944671217184 25.08857138929112 28.730317424640383 25.341664473896657 43 22.676034137512417 25.60054455298345 30.256709156847695 21.466712152656438 44 22.836215586965896 26.96016853262602 26.857217581081066 23.346398299327014 45 23.10446356319638 26.496569527221737 27.501907949699827 22.89705895988206 46 23.491616691226756 26.18755681086088 28.038052206363584 22.282774291548783 47 21.27123323410183 27.597888929991115 28.86514480435003 22.265733031557026 48 21.816873277290075 26.609016265291174 28.188705896947376 23.385404560471372 49 20.39455152870973 25.741734429387957 31.051893354324246 22.81182068757807 50 20.177043664312116 25.49318141780086 31.32701538477279 23.002759533114236 51 20.930887619444686 24.43112405493744 29.316722207959007 25.32126611765887 52 20.595561662983986 24.52064662149827 29.266493653649338 25.617298061868404 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2759.0 1 3861.0 2 4963.0 3 29957.0 4 54951.0 5 33913.0 6 12875.0 7 13308.5 8 13742.0 9 15346.0 10 16950.0 11 18188.0 12 19426.0 13 19555.5 14 18747.5 15 17810.0 16 16175.5 17 14541.0 18 13804.5 19 13068.0 20 12138.0 21 11208.0 22 11528.5 23 11849.0 24 14405.5 25 16962.0 26 18705.0 27 20448.0 28 24623.0 29 28798.0 30 31663.0 31 34528.0 32 41253.5 33 47979.0 34 55035.0 35 62091.0 36 74416.0 37 86741.0 38 93347.5 39 101440.0 40 102926.0 41 114693.0 42 126460.0 43 145673.0 44 164886.0 45 180254.0 46 195622.0 47 217743.5 48 239865.0 49 269537.5 50 299210.0 51 281542.0 52 263874.0 53 236305.5 54 208737.0 55 194096.0 56 179455.0 57 169763.5 58 160072.0 59 153157.5 60 146243.0 61 137390.0 62 128537.0 63 115874.5 64 86950.0 65 70688.0 66 57453.5 67 44219.0 68 36929.0 69 29639.0 70 25203.0 71 20767.0 72 18041.5 73 15316.0 74 11776.0 75 8236.0 76 6241.5 77 4247.0 78 3123.0 79 1999.0 80 1514.0 81 1029.0 82 882.5 83 736.0 84 506.0 85 276.0 86 182.5 87 89.0 88 53.0 89 11.5 90 6.0 91 6.0 92 6.0 93 5.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 3127703.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.519058536383866 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8764446157377 15.158750915302424 2 9.818784891405304 4.02944443885814 3 3.7378216283478234 2.3008974237189195 4 1.8621790899625765 1.528406470086886 5 1.1755322757827393 1.2060407789097287 6 0.8130603705906412 1.0009940002657995 7 0.6175967360586165 0.8870752505346459 8 0.49041206521715736 0.8050235098511804 9 0.40063737412926875 0.739863155845943 >10 4.832478538749731 23.638639535598085 >50 1.6757240911166618 24.62671373930724 >100 0.6897149948016487 18.830903064263637 >500 0.005358248449231814 0.7257743581295868 >1k 0.0033095063951137675 1.357318343794835 >5k 3.1519108524893024E-4 0.4029205356573985 >10k+ 6.303821704978605E-4 2.76123447987557 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39196 1.2531880424707844 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 22408 0.7164363112482227 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 12145 0.3883041324575895 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 11640 0.37215809813144024 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 6635 0.21213651040396098 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5825 0.18623891079172158 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 3801 0.12152688410632338 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 3333 0.10656382655258508 No Hit CGTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCT 3149 0.10068091503573069 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08280837406876548 0.0 2 0.0 0.0 0.0 0.23781030359979832 0.0 3 0.0 0.0 0.0 0.4953795165333793 0.0 4 0.0 0.0 0.0 0.7039670966201075 0.0 5 0.0 0.0 0.0 1.8075245635535087 0.0 6 0.0 0.0 0.0 2.3262438920831037 0.0 7 0.0 0.0 0.0 3.3395754008612712 0.0 8 3.197234520029555E-5 0.0 0.0 4.4654175923992785 0.0 9 3.197234520029555E-5 0.0 0.0 5.557401070370172 0.0 10 3.197234520029555E-5 0.0 0.0 6.267826580720739 0.0 11 3.197234520029555E-5 0.0 0.0 6.838149274403611 0.0 12 3.197234520029555E-5 0.0 0.0 7.215742671219102 0.0 13 3.197234520029555E-5 0.0 0.0 7.422028242451409 0.0 14 3.197234520029555E-5 0.0 0.0 7.5455693843053515 0.0 15 3.197234520029555E-5 0.0 0.0 7.8344714955352215 0.0 16 3.197234520029555E-5 0.0 0.0 8.209858800531892 0.0 17 3.197234520029555E-5 0.0 0.0 8.686438578087497 0.0 18 3.197234520029555E-5 0.0 0.0 8.931314769976561 0.0 19 3.197234520029555E-5 0.0 0.0 9.218042761732812 0.0 20 3.197234520029555E-5 0.0 0.0 9.548732728139468 0.0 21 3.197234520029555E-5 0.0 0.0 9.90707877314438 0.0 22 3.197234520029555E-5 0.0 0.0 10.256216782731608 0.0 23 3.197234520029555E-5 0.0 0.0 10.5364543884122 0.0 24 3.197234520029555E-5 0.0 0.0 10.761060113444275 0.0 25 3.197234520029555E-5 0.0 0.0 10.981637322981115 0.0 26 3.197234520029555E-5 0.0 0.0 11.217369424142893 0.0 27 3.197234520029555E-5 0.0 0.0 11.495432910349864 0.0 28 3.197234520029555E-5 0.0 0.0 11.76006801157271 0.0 29 6.39446904005911E-5 0.0 0.0 12.036468935829266 0.0 30 9.591703560088666E-5 0.0 0.0 12.300880230635709 0.0 31 9.591703560088666E-5 0.0 0.0 12.54984888271041 0.0 32 9.591703560088666E-5 0.0 0.0 12.83424289326704 0.0 33 9.591703560088666E-5 0.0 0.0 13.125159262244528 0.0 34 9.591703560088666E-5 0.0 0.0 13.490507250848307 0.0 35 1.278893808011822E-4 0.0 0.0 13.759362701637592 0.0 36 1.278893808011822E-4 0.0 0.0 14.049735540746676 0.0 37 1.278893808011822E-4 0.0 0.0 14.390049183058622 0.0 38 1.278893808011822E-4 0.0 0.0 14.936392617841271 0.0 39 1.278893808011822E-4 0.0 0.0 15.305353481452682 0.0 40 1.278893808011822E-4 0.0 0.0 15.674602096170895 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCGA 20 6.3131296E-4 46.0 31 CGTTTTT 14285 0.0 43.32727 1 TACGGGA 985 0.0 42.26396 3 CGCACTT 8450 0.0 42.21657 34 CCGCACT 8485 0.0 42.150856 33 CGACGGT 620 0.0 41.919357 27 CCCGCAC 8625 0.0 41.81333 32 CAACGCA 9200 0.0 41.475 16 TATGACC 9020 0.0 41.4102 27 ACCCGCA 8710 0.0 41.405277 31 AACGCAA 9225 0.0 41.33767 17 GCACTTA 8685 0.0 41.100746 35 ACGCAAG 9285 0.0 41.095318 18 TCAACGC 9325 0.0 41.04236 15 CTTAATC 9710 0.0 41.02575 10 AGCTTAT 9225 0.0 40.839024 23 CGCAAGC 9335 0.0 40.825924 19 CGGTCTA 620 0.0 40.806454 30 CTAGCGG 825 0.0 40.70303 1 GGACTTA 9955 0.0 40.68609 7 >>END_MODULE