##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933038.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 911880 Sequences flagged as poor quality 0 Sequence length 52 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44772009474931 33.0 31.0 34.0 31.0 34.0 2 32.815246523665394 34.0 31.0 34.0 31.0 34.0 3 32.81814164144405 34.0 31.0 34.0 31.0 34.0 4 36.28852699916656 37.0 37.0 37.0 35.0 37.0 5 36.13659253410537 37.0 35.0 37.0 35.0 37.0 6 36.24244637452296 37.0 37.0 37.0 35.0 37.0 7 36.52564262841602 37.0 37.0 37.0 35.0 37.0 8 36.49701824801509 37.0 37.0 37.0 35.0 37.0 9 38.305506206957055 39.0 39.0 39.0 37.0 39.0 10 37.968444312848185 39.0 38.0 39.0 35.0 39.0 11 37.676540772908716 39.0 37.0 39.0 35.0 39.0 12 37.41900579023556 39.0 37.0 39.0 35.0 39.0 13 37.37713185945519 39.0 37.0 39.0 35.0 39.0 14 38.131262885467386 41.0 38.0 41.0 33.0 41.0 15 38.441633767601 41.0 38.0 41.0 33.0 41.0 16 38.685480545685834 41.0 38.0 41.0 34.0 41.0 17 38.735733868491465 41.0 38.0 41.0 35.0 41.0 18 38.671660744834846 40.0 38.0 41.0 35.0 41.0 19 38.610668070360134 40.0 37.0 41.0 35.0 41.0 20 38.436490547001796 40.0 36.0 41.0 34.0 41.0 21 38.39819274465938 40.0 36.0 41.0 35.0 41.0 22 38.32965302452077 40.0 35.0 41.0 34.0 41.0 23 38.32873514058868 40.0 35.0 41.0 35.0 41.0 24 38.28675044962056 40.0 35.0 41.0 34.0 41.0 25 38.126333508795014 40.0 35.0 41.0 34.0 41.0 26 38.043029784620785 40.0 35.0 41.0 34.0 41.0 27 37.93292319164802 40.0 35.0 41.0 34.0 41.0 28 37.91881826556126 40.0 35.0 41.0 34.0 41.0 29 37.867285169101194 40.0 35.0 41.0 34.0 41.0 30 37.8192744659385 40.0 35.0 41.0 34.0 41.0 31 37.7010067114094 40.0 35.0 41.0 34.0 41.0 32 37.59171491862964 40.0 35.0 41.0 34.0 41.0 33 37.49152958722639 40.0 35.0 41.0 33.0 41.0 34 37.31919002500329 40.0 35.0 41.0 33.0 41.0 35 37.22507457121551 40.0 35.0 41.0 33.0 41.0 36 37.14549940781682 40.0 35.0 41.0 33.0 41.0 37 37.04717835680133 40.0 35.0 41.0 32.0 41.0 38 36.99720686932491 40.0 35.0 41.0 32.0 41.0 39 36.956726762293286 40.0 35.0 41.0 32.0 41.0 40 36.89838904241786 40.0 35.0 41.0 32.0 41.0 41 36.75414857218055 40.0 35.0 41.0 32.0 41.0 42 36.789553450015354 40.0 35.0 41.0 32.0 41.0 43 36.75672456902224 40.0 35.0 41.0 32.0 41.0 44 36.724561345791116 39.0 35.0 41.0 32.0 41.0 45 36.64607843137255 39.0 35.0 41.0 32.0 41.0 46 36.592011010220645 39.0 35.0 41.0 32.0 41.0 47 36.47426306092907 39.0 35.0 41.0 31.0 41.0 48 36.35086634206255 39.0 35.0 41.0 31.0 41.0 49 36.29398166425407 39.0 35.0 41.0 31.0 41.0 50 36.129500592183184 38.0 35.0 41.0 31.0 41.0 51 35.99578891959468 38.0 35.0 40.0 31.0 41.0 52 35.75351800675527 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 3.0 15 16.0 16 45.0 17 93.0 18 196.0 19 320.0 20 593.0 21 905.0 22 1468.0 23 2431.0 24 3999.0 25 6616.0 26 8605.0 27 9166.0 28 9560.0 29 10451.0 30 11965.0 31 14486.0 32 18085.0 33 24900.0 34 61668.0 35 81022.0 36 61580.0 37 64186.0 38 102233.0 39 414621.0 40 2662.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.481905513883405 22.442645962188006 25.65523972452516 14.420208799403431 2 38.6719743825942 22.29141992367417 25.912620081589683 13.123985612141947 3 32.06342939860508 23.336513576347766 31.609312628854674 12.990744396192481 4 28.741939728911696 26.095209896038952 30.800324604114575 14.362525770934772 5 24.110299600824668 30.816883800500065 30.378339255165155 14.694477343510112 6 25.407400096503924 37.06167478176953 28.407356231083035 9.123568890643506 7 86.89827608895907 1.2558670000438654 9.811378690178532 2.034478220818529 8 85.18390577707594 1.501952011229548 10.071610299600826 3.242531912093696 9 80.39303417116287 3.653112251612054 11.772820985217352 4.18103259200772 10 42.867482563495194 32.22825371759442 16.120103522393297 8.784160196517085 11 24.733956222309953 23.904570776856605 35.60271088301092 15.758762117822519 12 26.520375488002806 18.812892047199192 36.17647058823529 18.490261876562705 13 27.28462078343642 20.161315085318243 38.046014826512256 14.508049304733078 14 16.59779795587139 23.223340790454884 41.29117866385928 18.88768258981445 15 13.434223801377373 30.303000394788786 40.2738298898978 15.988945913936044 16 27.516559196385487 27.389678466464883 30.972386717550553 14.12137561959907 17 24.017195244988375 24.536232837654076 29.174672105978853 22.271899811378688 18 20.572663069702156 24.67342194148353 36.87886564021582 17.8750493485985 19 19.699192876255648 27.47971224283897 30.90329867965083 21.917796201254554 20 15.688029126639469 38.69774531736632 28.684147036890817 16.930078519103393 21 21.04838355924025 27.89928499363951 36.2998420844848 14.752489362635435 22 17.14161951133921 24.21601526516647 38.873426328025616 19.7689388954687 23 17.939092863096022 25.69274465938501 37.33506601745844 19.033096460060534 24 19.96490766328903 29.727157082072203 31.549217002237135 18.758718252401632 25 21.88072992060359 27.56360486028863 31.944334780892227 18.611330438215553 26 16.855945957801467 31.58441900250033 27.77064964688336 23.788985392814844 27 20.858665613896566 26.41893670219766 33.033622845111196 19.68877483879458 28 16.213646532438478 30.085098916524107 29.280497433872878 24.42075711716454 29 21.45402903890863 29.11567311488354 28.389700399175332 21.040597447032503 30 23.975303768039655 24.872899942974954 28.821007150063604 22.330789138921787 31 21.887309733736895 26.41794973022766 31.612492871869108 20.08224766416634 32 24.90481203667149 25.665986752642894 28.199982453831645 21.22921875685397 33 22.92428828354608 25.651620827301834 30.0810413650919 21.343049524060184 34 18.10753607930868 25.482190639119185 35.54261525639338 20.867658025178752 35 19.57077685660394 30.577597929552137 29.641290520682546 20.21033469316138 36 22.347896653068386 27.916721498442776 26.730490854059745 23.004890994429093 37 18.034061499320085 30.80306619292012 29.62166074483485 21.541211562924946 38 20.47078562968812 27.94238276966268 31.75659077948853 19.83024082116068 39 18.160722902136246 29.879260429003818 28.022108172127915 23.937908496732028 40 23.57601877440014 26.99916655700311 30.82565688467781 18.599157783918937 41 17.421919550818092 28.80664122472255 27.444510242575777 26.32692898188358 42 17.304140895731894 30.746041145764792 31.413892178795454 20.535925779707856 43 18.383230249594245 28.907970346975482 31.835548537088215 20.87325086634206 44 22.99864017195245 26.74112821862526 27.833048208097555 22.427183401324736 45 18.697306663157434 25.191911216388117 27.600561477387377 28.51022064306707 46 21.9492696407422 25.362438040092993 29.191340965916567 23.496951353248235 47 17.008378295389743 26.80900995745054 33.26753520200027 22.91507654515945 48 17.083826819318332 32.06968022108172 29.32973636882046 21.516756590779487 49 22.621068561652848 27.3389042417862 29.822016054744044 20.218011141816906 50 19.521757248760803 26.30225468263368 29.967429924990128 24.208558143615388 51 19.544786594727377 26.58507698381366 27.798942843356585 26.07119357810238 52 18.622406456989953 27.977146115716977 30.054722112558668 23.345725314734395 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 367.0 1 936.5 2 1506.0 3 11984.5 4 22463.0 5 12670.0 6 2877.0 7 3305.5 8 3734.0 9 5067.5 10 6401.0 11 7879.5 12 9358.0 13 9703.0 14 9644.0 15 9240.0 16 8433.0 17 7626.0 18 6863.0 19 6100.0 20 5859.5 21 5619.0 22 5915.5 23 6212.0 24 6756.0 25 7300.0 26 8050.0 27 8800.0 28 10437.5 29 12075.0 30 13818.5 31 15562.0 32 16586.5 33 17611.0 34 20959.0 35 24307.0 36 25532.5 37 26758.0 38 27594.5 39 31147.5 40 33864.0 41 37435.0 42 41006.0 43 45617.0 44 50228.0 45 57477.5 46 64727.0 47 73052.5 48 81378.0 49 88423.5 50 95469.0 51 89147.0 52 82825.0 53 73111.5 54 63398.0 55 55082.0 56 46766.0 57 42161.0 58 37556.0 59 40995.5 60 44435.0 61 29990.0 62 15545.0 63 12556.0 64 7697.5 65 5828.0 66 4341.5 67 2855.0 68 2150.5 69 1446.0 70 1187.5 71 929.0 72 775.5 73 622.0 74 531.5 75 441.0 76 424.0 77 407.0 78 257.5 79 108.0 80 73.5 81 39.0 82 35.5 83 32.0 84 21.0 85 10.0 86 5.5 87 1.0 88 0.5 89 0.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 911880.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.969153668205 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54783953604111 21.14259044015484 2 11.794486440217934 7.069415531289029 3 4.62602341452413 4.15914019747764 4 2.4194120230048672 2.900309228165424 5 1.4195249975812425 2.1270981394185293 6 0.9671170862290788 1.7390208343407556 7 0.7272267795745914 1.5256059776093343 8 0.5652785484658904 1.355273574745131 9 0.4900303418573633 1.3217215155485715 >10 6.123798418187076 40.9082874123394 >50 0.2690454857239297 4.842892359512129 >100 0.03775433317558404 2.151102496032552 >500 0.006597844632626229 1.3882970761341615 >1k 0.004765110012452276 2.445832758357897 >5k 3.6654692403479045E-4 0.7594000385595393 >10k+ 7.330938480695809E-4 4.164012420315044 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19643 2.154121156292495 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 18263 2.002785454226433 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 6913 0.7581041365091898 No Hit GGGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT 2989 0.32778435759091107 No Hit CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCTT 2264 0.248278282230118 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG 2183 0.23939553450015352 No Hit GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGCGTCTAATCG 2160 0.23687327279905251 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1990 0.2182304689213493 No Hit GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 1800 0.19739439399921044 No Hit CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 1786 0.19585910426810543 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1410 0.15462560863271482 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGCGTCTAAT 1333 0.14618151511163752 No Hit CGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1272 0.1394920384261087 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCC 1055 0.11569504759398165 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1016 0.11141816905733211 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 1007 0.11043119708733606 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT 945 0.10363205684958546 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG 932 0.10220643067070229 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25683203930341714 0.0 2 0.0 0.0 0.0 0.7788305478791069 0.0 3 0.0 0.0 0.0 1.2878887572926263 0.0 4 0.0 0.0 0.0 1.831600649208229 0.0 5 0.0 0.0 0.0 3.5710839145501603 0.0 6 0.0 0.0 0.0 4.845813045576172 0.0 7 0.0 0.0 0.0 5.699982453831645 0.0 8 0.0 0.0 0.0 7.353379830679476 0.0 9 0.0 0.0 0.0 8.176075799447295 0.0 10 0.0 0.0 0.0 9.373053471948063 0.0 11 0.0 0.0 0.0 11.267381673027153 0.0 12 0.0 0.0 0.0 12.4471421678291 0.0 13 0.0 0.0 0.0 13.000833442996885 0.0 14 0.0 0.0 0.0 13.468767820327235 0.0 15 0.0 0.0 0.0 13.91115058998991 0.0 16 0.0 0.0 0.0 14.540400052638505 0.0 17 0.0 0.0 0.0 15.348401105408607 0.0 18 0.0 0.0 0.0 16.291397990963723 0.0 19 0.0 0.0 0.0 16.844431284818178 0.0 20 0.0 0.0 0.0 17.525661271219896 0.0 21 0.0 0.0 0.0 18.149756546914066 0.0 22 0.0 0.0 0.0 18.811247093915867 0.0 23 0.0 0.0 0.0 19.456617098741063 0.0 24 0.0 0.0 0.0 19.919616616221433 0.0 25 0.0 0.0 0.0 20.465192788524806 0.0 26 0.0 0.0 0.0 20.91174277317191 0.0 27 0.0 0.0 0.0 21.596043339035838 0.0 28 0.0 0.0 0.0 22.101372987673816 0.0 29 0.0 0.0 0.0 22.713514936175812 0.0 30 0.0 0.0 0.0 23.978374347501866 0.0 31 1.0966355222178357E-4 0.0 0.0 24.541496688160723 0.0 32 1.0966355222178357E-4 0.0 0.0 24.96633328946791 0.0 33 1.0966355222178357E-4 0.0 0.0 25.487344826073606 0.0 34 1.0966355222178357E-4 0.0 0.0 26.034456288108085 0.0 35 1.0966355222178357E-4 0.0 0.0 26.560183357459316 0.0 36 1.0966355222178357E-4 0.0 0.0 26.976466201693206 0.0 37 1.0966355222178357E-4 0.0 0.0 27.475764354958987 0.0 38 1.0966355222178357E-4 0.0 0.0 28.03855770496118 0.0 39 1.0966355222178357E-4 0.0 0.0 29.54248366013072 0.0 40 1.0966355222178357E-4 0.0 0.0 30.026757906742116 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAG 20 6.3107646E-4 46.0 1 CGACGGT 20 6.3107646E-4 46.0 28 CCGATAG 20 6.3107646E-4 46.0 11 ATCGTAG 25 3.416596E-5 46.0 1 TGTTGCG 55 1.8189894E-12 46.0 1 GCCGACG 20 6.3107646E-4 46.0 1 AGTTGCG 25 3.416596E-5 46.0 1 CGAATCT 20 6.3107646E-4 46.0 15 CGGGACG 20 6.3107646E-4 46.0 6 CATACGG 40 5.6097633E-9 46.0 2 TCGTACT 20 6.3107646E-4 46.0 15 TATAGCG 20 6.3107646E-4 46.0 1 CCGCGTC 20 6.3107646E-4 46.0 18 CGACTTA 20 6.3107646E-4 46.0 17 ATACGAG 20 6.3107646E-4 46.0 1 CGCAAGA 20 6.3107646E-4 46.0 45 GATTCCG 20 6.3107646E-4 46.0 9 ATACCGG 20 6.3107646E-4 46.0 2 ACAACGA 130 0.0 45.999996 13 CGTGCGG 45 3.092282E-10 45.999996 2 >>END_MODULE