##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933036.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 476294 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3829924374441 33.0 31.0 34.0 31.0 34.0 2 32.7486405455454 34.0 31.0 34.0 31.0 34.0 3 32.765823210034135 34.0 31.0 34.0 31.0 34.0 4 36.244745892243024 37.0 37.0 37.0 35.0 37.0 5 36.06345870407773 37.0 35.0 37.0 35.0 37.0 6 36.179401798049106 37.0 36.0 37.0 35.0 37.0 7 36.46026193905445 37.0 37.0 37.0 35.0 37.0 8 36.4037254300915 37.0 37.0 37.0 35.0 37.0 9 38.210764779736884 39.0 39.0 39.0 37.0 39.0 10 37.93353894863257 39.0 38.0 39.0 35.0 39.0 11 37.59994877113716 39.0 37.0 39.0 35.0 39.0 12 37.142147497134125 39.0 35.0 39.0 35.0 39.0 13 37.03232037355079 39.0 35.0 39.0 33.0 39.0 14 37.59780303761962 40.0 36.0 41.0 31.0 41.0 15 37.9619226780098 40.0 36.0 41.0 33.0 41.0 16 38.22252852229925 40.0 36.0 41.0 33.0 41.0 17 38.309334150755625 40.0 36.0 41.0 34.0 41.0 18 38.27369649838125 40.0 36.0 41.0 34.0 41.0 19 38.19954901804348 40.0 36.0 41.0 34.0 41.0 20 38.0155366223383 40.0 35.0 41.0 33.0 41.0 21 37.961527963820664 40.0 35.0 41.0 34.0 41.0 22 37.919862521887744 40.0 35.0 41.0 34.0 41.0 23 37.9290774185692 40.0 35.0 41.0 34.0 41.0 24 37.89212755147031 40.0 35.0 41.0 34.0 41.0 25 37.69803314759371 40.0 35.0 41.0 34.0 41.0 26 37.57739757376746 39.0 35.0 41.0 34.0 41.0 27 37.455548463763975 39.0 35.0 41.0 34.0 41.0 28 37.429535119065115 39.0 35.0 41.0 34.0 41.0 29 37.37206011413119 39.0 35.0 41.0 34.0 41.0 30 37.295783696624355 39.0 35.0 41.0 33.0 41.0 31 37.135246297454934 39.0 35.0 41.0 33.0 41.0 32 37.01036754609548 39.0 35.0 41.0 33.0 41.0 33 36.86393488055697 39.0 35.0 41.0 33.0 41.0 34 36.67812737510865 39.0 35.0 41.0 32.0 41.0 35 36.589640012261334 39.0 35.0 41.0 32.0 41.0 36 36.47538705085515 39.0 35.0 41.0 31.0 41.0 37 36.346972668141944 39.0 35.0 41.0 31.0 41.0 38 36.30705194690674 39.0 35.0 41.0 31.0 41.0 39 36.23572835265613 39.0 35.0 41.0 31.0 41.0 40 36.13108080303342 39.0 35.0 41.0 31.0 41.0 41 35.944284412568706 38.0 35.0 41.0 30.0 41.0 42 36.00083561833657 38.0 35.0 41.0 30.0 41.0 43 35.92725291521623 38.0 35.0 41.0 30.0 41.0 44 35.900815462718406 38.0 35.0 41.0 30.0 41.0 45 35.82721386370603 38.0 35.0 41.0 30.0 41.0 46 35.75288792216572 38.0 35.0 41.0 30.0 41.0 47 35.647318672920505 37.0 35.0 41.0 30.0 41.0 48 35.51578646802185 37.0 35.0 40.0 29.0 41.0 49 35.47631714865188 37.0 35.0 40.0 29.0 41.0 50 35.30975825855459 37.0 35.0 40.0 29.0 41.0 51 35.1787635368071 36.0 35.0 40.0 29.0 41.0 52 34.84301082944568 36.0 35.0 39.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 3.0 14 6.0 15 4.0 16 29.0 17 78.0 18 126.0 19 246.0 20 434.0 21 713.0 22 1088.0 23 1686.0 24 2569.0 25 4124.0 26 5072.0 27 5722.0 28 6169.0 29 6739.0 30 7556.0 31 9180.0 32 11176.0 33 15330.0 34 38800.0 35 55030.0 36 33550.0 37 35034.0 38 53455.0 39 181505.0 40 867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.772900771372306 21.735944605642732 25.003044338160883 14.48811028482408 2 40.68033609493296 21.428361474215503 24.55458183390931 13.336720596942225 3 34.84927376788286 21.799980684199255 29.636527019026065 13.71421852889182 4 31.417989729032907 24.38871789273012 30.109134274208788 14.084158104028186 5 24.93123994843521 28.89580805132964 31.74047961973067 14.43247238050448 6 26.381814593507368 34.64477822521384 29.942220561249982 9.031186620028805 7 83.56057393122735 1.8996670123915063 11.657925566981737 2.881833489399405 8 81.12930248963876 2.280524214035869 12.359173115764632 4.231000180560747 9 74.79099043867863 4.475387050855144 14.954838818040958 5.778783692425267 10 50.177201476399034 18.663682515421147 19.39663317194842 11.762482836231403 11 32.147161207153566 24.360584009036433 27.47588674222224 16.016368041587757 12 31.524016678774036 18.141316077884667 33.61768151603841 16.716985727302884 13 29.823806304509397 19.966029385211655 36.46277299315129 13.747391317127654 14 17.42789117645824 22.50962640721907 42.539062007919476 17.52342040840321 15 14.240364144834913 28.78369242526675 40.996737309308955 15.979206120589385 16 29.30710863458284 24.805897197949168 30.663413773845566 15.223580393622427 17 25.651173434895252 23.149567284072443 27.259003892553757 23.940255388478544 18 22.631609888010345 23.89469529324325 35.92822920297127 17.54546561577513 19 23.1063166867523 24.71939600330888 29.749062553800805 22.425224756138014 20 16.860804461110153 38.504159195790834 27.512838708864695 17.12219763423432 21 21.831053928875864 27.03267309686874 37.09137633478482 14.044896639470581 22 17.868165460828816 23.364560544537618 39.34901552402508 19.41825847060849 23 19.324198919154973 24.17897349116302 36.85748718228657 19.63934040739543 24 21.68156642745867 29.89917991828576 29.240343149399322 19.178910504856244 25 24.150209744401568 25.64361507808203 30.672021902438413 19.534153275077998 26 16.67562471918605 30.161622863189542 27.465808933137936 25.69694348448647 27 22.101265184948794 26.736217546305436 33.10329334402701 18.05922392471877 28 16.2055369162744 30.492930836836074 27.952063221455653 25.34946902543387 29 22.55812586343729 30.34764242253734 26.62221233103923 20.47201938298614 30 25.346739618806875 26.858830890164477 26.567204289787398 21.22722520124125 31 21.812158036842792 28.59515341364787 30.64850701457503 18.944181534934305 32 26.43115386714928 26.195795034159573 25.38201195060194 21.991039148089207 33 24.66585764254851 26.606045845633158 28.58885478297018 20.13924172884815 34 17.861027012727433 26.270748739224093 34.059635435256375 21.8085888127921 35 21.127076973465968 31.170663497755584 27.115395113102416 20.586864415676033 36 25.729066500942693 28.690682645592847 23.543651610139957 22.0365992433245 37 18.349800753316227 34.48983191054265 26.24975330363179 20.910614032509333 38 21.63369683430822 26.922657014365075 30.2004644190353 21.2431817322914 39 19.673982876122732 29.023040391018995 25.671329053063864 25.631647679794412 40 26.316518788815312 26.088718312638832 27.804045400529926 19.79071749801593 41 18.73464708772313 26.361029112270995 24.269253864209922 30.635069935795954 42 19.606797482227364 28.13703300902384 30.545839334528672 21.710330174220125 43 18.88350472607255 27.766463570819706 32.09488257252873 21.255149130579014 44 24.456323195337333 25.311257332655877 27.145418585999405 23.087000886007385 45 19.05923652198012 25.071279503835864 26.118741785535825 29.75074218864819 46 22.625941120400427 24.805057380525476 27.917840661440202 24.6511608376339 47 17.214997459552293 25.97240359945748 32.268724779233 24.543874161757234 48 17.030237626340032 31.96911991333084 28.670527027424235 22.330115432904886 49 25.261288195946204 25.6114920616258 28.603971496596643 20.523248245831358 50 20.325051333840022 25.398598344719858 27.840367504104606 26.435982817335514 51 20.596732270404413 26.084939134232215 25.67048923564017 27.647839359723196 52 19.443033084607407 27.38203714512465 29.00183500107077 24.173094769197174 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 529.0 1 1149.0 2 1769.0 3 6093.5 4 10418.0 5 6082.0 6 1746.0 7 1954.5 8 2163.0 9 2894.0 10 3625.0 11 4477.5 12 5330.0 13 5528.5 14 5424.5 15 5122.0 16 4639.5 17 4157.0 18 3968.5 19 3780.0 20 3599.0 21 3418.0 22 3181.0 23 2944.0 24 2888.5 25 2833.0 26 3181.0 27 3529.0 28 3884.0 29 4239.0 30 4762.5 31 5286.0 32 5659.0 33 6032.0 34 6398.0 35 6764.0 36 7977.5 37 9191.0 38 9456.5 39 10985.0 40 12248.0 41 14421.0 42 16594.0 43 20113.5 44 23633.0 45 26118.5 46 28604.0 47 35671.5 48 42739.0 49 48255.5 50 53772.0 51 49276.0 52 44780.0 53 39736.5 54 34693.0 55 31962.5 56 29232.0 57 27091.0 58 24950.0 59 27402.5 60 29855.0 61 20935.5 62 12016.0 63 9987.5 64 7035.0 65 6111.0 66 4962.0 67 3813.0 68 3269.0 69 2725.0 70 2174.5 71 1624.0 72 1393.5 73 1163.0 74 899.0 75 635.0 76 501.5 77 368.0 78 305.5 79 243.0 80 172.5 81 102.0 82 86.5 83 71.0 84 40.0 85 9.0 86 15.0 87 21.0 88 11.5 89 4.5 90 7.0 91 3.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 476294.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.3552344014299 #Duplication Level Percentage of deduplicated Percentage of total 1 71.2474463927469 22.3398038214789 2 11.443112394729845 7.1760294283732415 3 4.448878578680631 4.1848689197409445 4 2.3363151029718483 2.9302283075713254 5 1.421747084214246 2.228960654254359 6 0.9422772416749581 1.772719427031067 7 0.6871025850982806 1.5080983829509516 8 0.5988895792262152 1.5022658509769362 9 0.5046756799592609 1.4241801817641278 >10 6.181313471474938 40.66108588492291 >50 0.12795089267463505 2.592000997853278 >100 0.045553197392016666 2.756259083778826 >500 0.007368899578120343 1.4928161338527752 >1k 0.006029099654825735 3.282851182775436 >5k 6.698999616473038E-4 1.8076791399939471 >10k+ 6.698999616473038E-4 2.3401526026809862 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 11141 2.339101479338392 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8606 1.8068671870735302 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 4735 0.9941338752955107 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCTT 1872 0.3930345542878978 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGAATCACGTCG 1682 0.35314322666252357 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 1578 0.33130797364652925 No Hit GGGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT 1285 0.2697913473610837 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 1234 0.25908367520900955 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 1162 0.24396696158255196 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCGAATCACGT 1060 0.2225516172784037 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 1021 0.21436339739740579 No Hit GGGGTTGGGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 801 0.1681734390943409 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCC 761 0.15977526485742 No Hit CGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 747 0.1568359038744977 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 744 0.15620604080672862 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGCTGTCTCTTATACACATCTGACGCG 651 0.13668028570588753 No Hit GGGGTTGGGGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCC 640 0.1343707877907343 No Hit GGGGTTGGGGATTTAGCTCAGTGGCTGTCTCTTATACACATCTGACGCGAAT 635 0.1333210160111192 No Hit TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 556 0.11673462189320041 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 550 0.11547489575766227 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCCTGTCTCTTATACACATCTG 517 0.10854640201220256 No Hit AGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 505 0.10602694974112628 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41319017245650796 0.0 2 0.0 0.0 0.0 1.1133879494597874 0.0 3 0.0 0.0 0.0 1.7522790545335445 0.0 4 0.0 0.0 0.0 2.4468080639269023 0.0 5 0.0 0.0 0.0 4.446833258449613 0.0 6 0.0 0.0 0.0 5.833581779321175 0.0 7 0.0 0.0 0.0 6.743314003535631 0.0 8 0.0 0.0 0.0 8.559209227913852 0.0 9 0.0 0.0 0.0 9.400076423385556 0.0 10 0.0 0.0 0.0 10.72089927649729 0.0 11 0.0 0.0 0.0 13.205499124490336 0.0 12 0.0 0.0 0.0 14.776797524218235 0.0 13 0.0 0.0 0.0 15.445922056544907 0.0 14 0.0 0.0 0.0 15.80599377695289 0.0 15 0.0 0.0 0.0 16.303795554846378 0.0 16 0.0 0.0 0.0 17.1347948955897 0.0 17 0.0 0.0 0.0 18.035289128143543 0.0 18 0.0 0.0 0.0 19.12033323955372 0.0 19 0.0 0.0 0.0 19.713874203748105 0.0 20 0.0 0.0 0.0 20.55201199259281 0.0 21 0.0 0.0 0.0 21.252839632663857 0.0 22 0.0 0.0 0.0 21.938130650396605 0.0 23 2.0995435592302233E-4 0.0 0.0 22.533141295082448 0.0 24 2.0995435592302233E-4 0.0 0.0 22.997560330384175 0.0 25 2.0995435592302233E-4 0.0 0.0 23.550160195173568 0.0 26 2.0995435592302233E-4 0.0 0.0 24.031375578949138 0.0 27 2.0995435592302233E-4 0.0 0.0 24.837180396981697 0.0 28 4.1990871184604465E-4 0.0 0.0 25.375713319924248 0.0 29 4.1990871184604465E-4 0.0 0.0 26.085149088588143 0.0 30 4.1990871184604465E-4 0.0 0.0 27.545171679676837 0.0 31 4.1990871184604465E-4 0.0 0.0 28.108479216618306 0.0 32 4.1990871184604465E-4 0.0 0.0 28.53237706122689 0.0 33 4.1990871184604465E-4 0.0 0.0 29.0303887934763 0.0 34 4.1990871184604465E-4 0.0 0.0 29.623299894602912 0.0 35 4.1990871184604465E-4 0.0 0.0 30.142307062444626 0.0 36 4.1990871184604465E-4 0.0 0.0 30.50678782432699 0.0 37 4.1990871184604465E-4 0.0 0.0 31.019706315846935 0.0 38 4.1990871184604465E-4 0.0 0.0 31.570836500144868 0.0 39 4.1990871184604465E-4 0.0 0.0 33.2500514388172 0.0 40 4.1990871184604465E-4 0.0 0.0 33.70439266503462 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGT 20 6.3077116E-4 46.000004 31 ACTGATC 20 6.3077116E-4 46.000004 16 ATGTGCG 20 6.3077116E-4 46.000004 1 GTAGGGT 40 5.5988494E-9 46.000004 4 TACGGGA 40 5.5988494E-9 46.000004 4 AGTGCGA 20 6.3077116E-4 46.000004 29 CTCATGC 20 6.3077116E-4 46.000004 23 TCGAGTC 20 6.3077116E-4 46.000004 16 CGGTATG 20 6.3077116E-4 46.000004 31 CACGTAA 20 6.3077116E-4 46.000004 33 TAGTGCG 20 6.3077116E-4 46.000004 1 TCGGTAT 20 6.3077116E-4 46.000004 30 GTTGCGC 20 6.3077116E-4 46.000004 41 TACCGGG 20 6.3077116E-4 46.000004 3 TTTAGCG 30 1.8590908E-6 46.0 1 GCGACTC 30 1.8590908E-6 46.0 43 CTCGTTT 25 3.4141216E-5 46.0 22 CTCGTAA 60 0.0 46.0 33 GGTCGCT 25 3.4141216E-5 46.0 10 CGAAAGG 50 1.6370905E-11 46.0 2 >>END_MODULE