##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933034.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1333929 Sequences flagged as poor quality 0 Sequence length 52 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44777645586834 33.0 31.0 34.0 31.0 34.0 2 32.81752552047373 34.0 31.0 34.0 31.0 34.0 3 32.842014080209665 34.0 31.0 34.0 31.0 34.0 4 36.312829243535454 37.0 37.0 37.0 35.0 37.0 5 36.15843122085209 37.0 35.0 37.0 35.0 37.0 6 36.2512180183503 37.0 37.0 37.0 35.0 37.0 7 36.50670238071142 37.0 37.0 37.0 35.0 37.0 8 36.46200285022666 37.0 37.0 37.0 35.0 37.0 9 38.293065822843644 39.0 39.0 39.0 37.0 39.0 10 38.00344920906585 39.0 38.0 39.0 35.0 39.0 11 37.6708153132588 39.0 37.0 39.0 35.0 39.0 12 37.206691660500674 39.0 35.0 39.0 35.0 39.0 13 37.07390423328378 39.0 35.0 39.0 34.0 39.0 14 37.65653944100473 40.0 36.0 41.0 31.0 41.0 15 38.03512855631747 40.0 36.0 41.0 33.0 41.0 16 38.35242505410708 40.0 36.0 41.0 33.0 41.0 17 38.4404259896891 40.0 36.0 41.0 35.0 41.0 18 38.395970100357665 40.0 36.0 41.0 35.0 41.0 19 38.335172261792046 40.0 36.0 41.0 35.0 41.0 20 38.14479931090785 40.0 35.0 41.0 34.0 41.0 21 38.090612768745565 40.0 35.0 41.0 34.0 41.0 22 38.06528383444696 40.0 35.0 41.0 34.0 41.0 23 38.04724614278571 40.0 35.0 41.0 34.0 41.0 24 37.98709301619501 40.0 35.0 41.0 34.0 41.0 25 37.81058287210189 40.0 35.0 41.0 34.0 41.0 26 37.721019634478296 40.0 35.0 41.0 34.0 41.0 27 37.62251139303516 39.0 35.0 41.0 34.0 41.0 28 37.58831092209555 39.0 35.0 41.0 34.0 41.0 29 37.52467934950061 39.0 35.0 41.0 34.0 41.0 30 37.49003432716434 39.0 35.0 41.0 34.0 41.0 31 37.35589525379537 40.0 35.0 41.0 34.0 41.0 32 37.255856945909414 39.0 35.0 41.0 33.0 41.0 33 37.16030238490954 39.0 35.0 41.0 33.0 41.0 34 36.98147202737177 39.0 35.0 41.0 33.0 41.0 35 36.89181058362177 39.0 35.0 41.0 33.0 41.0 36 36.83080058983649 39.0 35.0 41.0 33.0 41.0 37 36.682304680384036 39.0 35.0 41.0 32.0 41.0 38 36.67350136326596 39.0 35.0 41.0 32.0 41.0 39 36.64696996616762 39.0 35.0 41.0 33.0 41.0 40 36.55929888322392 39.0 35.0 41.0 32.0 41.0 41 36.392795268713705 38.0 35.0 41.0 32.0 41.0 42 36.448286228127586 38.0 35.0 41.0 32.0 41.0 43 36.4258727413528 38.0 35.0 41.0 32.0 41.0 44 36.41502508754214 38.0 35.0 41.0 32.0 41.0 45 36.369820282788666 38.0 35.0 41.0 32.0 41.0 46 36.34059159070685 38.0 35.0 41.0 32.0 41.0 47 36.24741496736333 38.0 35.0 41.0 32.0 41.0 48 36.11900408492506 37.0 35.0 41.0 31.0 41.0 49 36.097654372908906 37.0 35.0 41.0 31.0 41.0 50 35.978384156877915 37.0 35.0 40.0 31.0 41.0 51 35.913438421385244 37.0 35.0 40.0 31.0 41.0 52 35.70031463443706 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 3.0 14 9.0 15 41.0 16 66.0 17 132.0 18 296.0 19 487.0 20 857.0 21 1355.0 22 2175.0 23 3324.0 24 5278.0 25 8317.0 26 10477.0 27 11968.0 28 13253.0 29 14955.0 30 17481.0 31 21859.0 32 28445.0 33 41023.0 34 112849.0 35 156405.0 36 104973.0 37 105586.0 38 149978.0 39 518402.0 40 3931.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.9060654652534 22.822953845369582 26.045913987925896 13.225066701451127 2 38.177894025843955 23.01329381098994 26.21376400093258 12.595048162233521 3 32.44543000414565 22.770027490218745 31.153757059033875 13.630785446601731 4 28.942469951549143 26.736280566656845 30.58116286548984 13.740086616304167 5 24.297395138721775 30.70358317421692 30.423883130211575 14.575138556849726 6 25.269335924175873 37.96446437554023 27.315396846458846 9.450802853825053 7 85.15528187782108 1.6339700238918262 10.14701682023556 3.0637312780515304 8 82.86423040506654 1.9090971108657206 10.601688695575252 4.624983788492491 9 77.34587073225036 3.367495571353498 13.754255286450778 5.532378409945357 10 51.66279464649168 17.595539192865587 18.50173435017906 12.239931810463675 11 33.42839086638044 23.67232438907918 27.368698034153244 15.530586710387134 12 31.506624415542355 17.777782775545028 32.405322921984606 18.310269886928015 13 29.1867108369336 19.810649592294645 35.561937704330596 15.440701866441167 14 17.091239488758397 22.83644781693778 40.60351038173696 19.46880231256686 15 13.065088171859221 30.223122819880217 39.88375693159082 16.828032076669746 16 26.79093115150806 26.08789523280474 31.543657870846197 15.577515744840992 17 24.344024307140785 25.34617659560591 27.24537812732162 23.064420969931685 18 21.46403594194294 26.084821605947546 34.45160874379371 17.99953370831581 19 21.732565976150156 28.26739654059549 27.59652125412972 22.40351622912464 20 16.185044331444928 40.19164438287195 24.593362915117673 19.02994837056545 21 20.968357386337654 29.82669992180993 33.27665865274689 15.928284039105531 22 17.935887142419123 24.36306580035369 36.937123340147785 20.763923717079393 23 18.477070368812733 26.220510986716683 33.969349193247915 21.333069451222666 24 21.008014669446425 31.049928444467433 29.226817919094643 18.715238966991496 25 23.472313743834942 26.06345615096456 30.45724322658852 20.00698687861198 26 16.652310580248276 31.399122442049016 26.491439949202693 25.457127028500015 27 22.128464108659458 27.456333882837843 32.03671259864655 18.378489409856147 28 16.916267657424044 31.1342657667687 26.188050488444286 25.76141608736297 29 20.02475394117678 31.540734177006424 27.071080994565676 21.36343088725112 30 25.001855421090628 26.699472010879138 26.557410476869457 21.741262091160774 31 21.791114819454407 27.3629256129824 31.351143876473188 19.494815691090007 32 26.00925536516561 27.419300427533997 25.740425464923543 20.831018742376845 33 25.50690479028494 28.375123413614965 28.19715292193213 17.920818874167963 34 19.4678277479536 26.713715647534464 34.67785766708723 19.140598937424706 35 21.224592913116066 34.526650219014655 26.401705038274155 17.847051829595127 36 27.166138527612787 29.29653677219702 23.586637669621098 19.950687030569092 37 20.25842454883281 33.13557168335046 26.213913933950007 20.39208983386672 38 23.301540036988474 29.17906425304495 28.25480216713183 19.26459354283474 39 20.505064362496057 30.291342342808353 24.277079214860763 24.92651407983483 40 27.728312376445825 25.544238111623628 27.965356476993904 18.76209303493664 41 19.29045698834046 27.553490478128893 25.264313168092155 27.89173936543849 42 17.879512327867523 28.78009249367845 31.261259032527217 22.079136145926807 43 18.71906225893582 28.75497871325985 31.434356701143763 21.091602326660563 44 23.687692523365186 27.319070205385742 27.78798571738076 21.205251553868308 45 19.10184125242048 27.34920674188806 25.083269049552115 28.465682956139343 46 22.216249890361482 25.433887410799226 28.289961459717873 24.059901239121423 47 18.30104900635641 26.298850988320964 31.599957718889087 23.800142286433537 48 18.585621873428046 31.682870677524814 27.605817101210032 22.125690347837104 49 25.00432931587813 25.92994079894807 28.237634836636733 20.828095048537065 50 20.59547397200301 27.28600997504365 27.9757768217049 24.142739231248438 51 18.932716808765683 27.64937264277184 26.68762730250261 26.730283245959868 52 19.15146908118798 28.94569351142377 28.41073250525328 23.492104902134972 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1624.0 1 2785.5 2 3947.0 3 17974.5 4 32002.0 5 17748.0 6 3494.0 7 4673.5 8 5853.0 9 8872.5 10 11892.0 11 14934.5 12 17977.0 13 18886.0 14 18077.5 15 16360.0 16 14371.5 17 12383.0 18 10896.0 19 9409.0 20 8194.5 21 6980.0 22 6403.5 23 5827.0 24 6172.5 25 6518.0 26 7168.5 27 7819.0 28 8923.5 29 10028.0 30 11651.0 31 13274.0 32 14041.0 33 14808.0 34 17155.0 35 19502.0 36 20787.0 37 22072.0 38 24596.0 39 32027.5 40 36935.0 41 46707.5 42 56480.0 43 69964.5 44 83449.0 45 104231.0 46 125013.0 47 128791.0 48 132569.0 49 135340.0 50 138111.0 51 114289.5 52 90468.0 53 82330.5 54 74193.0 55 70567.5 56 66942.0 57 65458.0 58 63974.0 59 71111.0 60 78248.0 61 58663.0 62 39078.0 63 31801.5 64 21480.0 65 18435.0 66 15549.5 67 12664.0 68 10697.0 69 8730.0 70 7453.0 71 6176.0 72 5158.0 73 4140.0 74 3277.0 75 2414.0 76 2005.5 77 1597.0 78 1178.0 79 759.0 80 506.0 81 253.0 82 142.5 83 32.0 84 31.5 85 31.0 86 22.0 87 13.0 88 11.0 89 6.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1333929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.428624502757568 #Duplication Level Percentage of deduplicated Percentage of total 1 67.53713636289088 14.472279351119225 2 12.283424468033585 5.264337810669526 3 5.479047814701447 3.522253747616752 4 3.130837034298401 2.683581247492302 5 1.969237040191511 2.10990205455928 6 1.3229348303746638 1.7009204233030766 7 0.9302210855394452 1.3953350842600607 8 0.7414613027948448 1.2710796672732927 9 0.5391114141743513 1.039717445354351 >10 4.333444601779927 19.526614985555593 >50 0.9923762047858788 15.384629131051536 >100 0.7242516694197483 22.169324714021503 >500 0.00843378945466433 1.3235058088947418 >1k 0.007028157878886941 2.8890318538948376 >5k 0.0 0.0 >10k+ 0.0010542236818330412 5.247486674933943 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28697 2.1513139005149453 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 25576 1.917343426824066 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 15413 1.1554587987816443 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTTA 3433 0.2573600244090952 No Hit CTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCTT 3294 0.24693967969809488 TruSeq Adapter, Index 21 (95% over 24bp) GGGGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT 3160 0.23689416753065567 No Hit CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCT 2935 0.2200267030704033 TruSeq Adapter, Index 15 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCT 2403 0.18014452043549545 TruSeq Adapter, Index 15 (95% over 22bp) GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2326 0.17437209926465352 No Hit CGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 2147 0.16095309420516385 TruSeq Adapter, Index 21 (95% over 22bp) GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCTATAGGACTCG 1792 0.1343399836123212 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCG 1785 0.13381521805133556 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 1746 0.13089152421155847 No Hit GGGGTTGGGGATTTAGCTCCTGTCTCTTATACACATCTGACGCTATAGGACT 1643 0.1231699738141985 No Hit CGTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT 1631 0.12227037570965171 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1552 0.11634802152138532 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTT 1511 0.11327439466418376 No Hit GGGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1352 0.10135471977893876 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25286203388636125 0.0 2 0.0 0.0 0.0 0.778302293450401 0.0 3 0.0 0.0 0.0 1.2405457861700286 0.0 4 0.0 0.0 0.0 1.8117905825572425 0.0 5 0.0 0.0 0.0 3.512180933168107 0.0 6 0.0 0.0 0.0 5.397438694263338 0.0 7 0.0 0.0 0.0 7.062070020218467 0.0 8 0.0 0.0 0.0 9.931038308635618 0.0 9 0.0 0.0 0.0 11.615535759399489 0.0 10 0.0 0.0 0.0 13.172964977896125 0.0 11 0.0 0.0 0.0 15.271502456277657 0.0 12 0.0 0.0 0.0 16.429959915407792 0.0 13 0.0 0.0 0.0 16.942730834999463 0.0 14 0.0 0.0 0.0 17.386532566575884 0.0 15 0.0 0.0 0.0 17.722682391641534 0.0 16 0.0 0.0 0.0 18.238826804125257 0.0 17 0.0 0.0 0.0 18.83788417524471 0.0 18 0.0 0.0 0.0 19.513857184302914 0.0 19 7.496650871223281E-5 0.0 0.0 19.91995076199708 0.0 20 7.496650871223281E-5 0.0 0.0 20.4673562086138 0.0 21 7.496650871223281E-5 0.0 0.0 20.973754974964933 0.0 22 7.496650871223281E-5 0.0 0.0 21.52220995270363 0.0 23 1.4993301742446561E-4 0.0 0.0 22.00874259424602 0.0 24 2.2489952613669842E-4 0.0 0.0 22.356437261653355 0.0 25 2.2489952613669842E-4 0.0 0.0 22.735243030176267 0.0 26 2.2489952613669842E-4 0.0 0.0 23.054675323799092 0.0 27 2.2489952613669842E-4 0.0 0.0 23.527489094247144 0.0 28 2.2489952613669842E-4 0.0 0.0 23.881331015368882 0.0 29 2.2489952613669842E-4 0.0 0.0 24.365239829106347 0.0 30 2.2489952613669842E-4 0.0 0.0 25.893956874766197 0.0 31 2.2489952613669842E-4 0.0 0.0 26.448858972254147 0.0 32 2.2489952613669842E-4 0.0 0.0 26.798727668414134 0.0 33 2.2489952613669842E-4 0.0 0.0 27.194925666958287 0.0 34 2.2489952613669842E-4 0.0 0.0 27.65536996346882 0.0 35 2.2489952613669842E-4 0.0 0.0 28.109442106738815 0.0 36 2.2489952613669842E-4 0.0 0.0 28.423101979190797 0.0 37 2.2489952613669842E-4 0.0 0.0 28.827246427658444 0.0 38 2.2489952613669842E-4 0.0 0.0 29.32270008373759 0.0 39 2.2489952613669842E-4 0.0 0.0 31.413890844265325 0.0 40 2.2489952613669842E-4 0.0 0.0 31.872610911075476 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 40 5.6134013E-9 46.000004 1 AATCCCG 20 6.31182E-4 46.000004 39 ATTAGCG 75 0.0 46.000004 1 GTCGAAC 20 6.31182E-4 46.000004 40 CTATCCG 20 6.31182E-4 46.000004 29 CGGCAAT 20 6.31182E-4 46.000004 35 CCGGATC 20 6.31182E-4 46.000004 37 ATCGTAG 40 5.6134013E-9 46.000004 1 CGTTACC 20 6.31182E-4 46.000004 26 CCCGTAG 20 6.31182E-4 46.000004 41 ACGGCAC 40 5.6134013E-9 46.000004 33 CAGATCG 20 6.31182E-4 46.000004 19 ACTACCG 35 1.01974365E-7 46.000004 1 ACTCGAC 35 1.01974365E-7 46.000004 26 TATAGTC 20 6.31182E-4 46.000004 21 TTACGGC 20 6.31182E-4 46.000004 18 TTACGAT 35 1.01974365E-7 46.000004 17 ACGTATG 20 6.31182E-4 46.000004 1 CCGCGTA 20 6.31182E-4 46.000004 28 ATAACCG 20 6.31182E-4 46.000004 25 >>END_MODULE