##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933029.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2708534 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53529843081165 33.0 31.0 34.0 31.0 34.0 2 32.89264709248619 34.0 31.0 34.0 31.0 34.0 3 32.9360864585787 34.0 31.0 34.0 31.0 34.0 4 36.385604168158864 37.0 37.0 37.0 35.0 37.0 5 36.367575596245054 37.0 37.0 37.0 35.0 37.0 6 36.49885731543337 37.0 37.0 37.0 35.0 37.0 7 36.54646720329152 37.0 37.0 37.0 35.0 37.0 8 36.397263981179485 37.0 37.0 37.0 35.0 37.0 9 38.066036830255776 39.0 39.0 39.0 35.0 39.0 10 37.97353217644674 39.0 38.0 39.0 35.0 39.0 11 37.69285967981203 39.0 37.0 39.0 35.0 39.0 12 37.589685416538984 39.0 37.0 39.0 35.0 39.0 13 37.54508675172621 39.0 37.0 39.0 35.0 39.0 14 39.01521930313594 41.0 38.0 41.0 35.0 41.0 15 39.071135529404465 41.0 38.0 41.0 35.0 41.0 16 39.0533018968933 41.0 38.0 41.0 35.0 41.0 17 39.04671678479945 41.0 38.0 41.0 35.0 41.0 18 38.92423945942713 40.0 38.0 41.0 35.0 41.0 19 38.78229477643626 40.0 37.0 41.0 35.0 41.0 20 38.63393407651519 40.0 37.0 41.0 35.0 41.0 21 38.570872287370214 40.0 36.0 41.0 35.0 41.0 22 38.52340380441966 40.0 36.0 41.0 35.0 41.0 23 38.47197524564949 40.0 36.0 41.0 35.0 41.0 24 38.39641665934413 40.0 36.0 41.0 35.0 41.0 25 38.32121730796069 40.0 35.0 41.0 35.0 41.0 26 38.23259667406796 40.0 35.0 41.0 35.0 41.0 27 38.1491212589541 40.0 35.0 41.0 35.0 41.0 28 38.110846310218 40.0 35.0 41.0 35.0 41.0 29 38.03862679958974 40.0 35.0 41.0 34.0 41.0 30 37.95893055062259 40.0 35.0 41.0 34.0 41.0 31 37.80242522338653 40.0 35.0 41.0 34.0 41.0 32 37.666941600142366 40.0 35.0 41.0 34.0 41.0 33 37.418797401103326 40.0 35.0 41.0 33.0 41.0 34 37.21688854561176 40.0 35.0 41.0 33.0 41.0 35 37.064468084949276 40.0 35.0 41.0 33.0 41.0 36 36.99158363897222 40.0 35.0 41.0 33.0 41.0 37 36.893724058845116 40.0 35.0 41.0 33.0 41.0 38 36.87244280485311 40.0 35.0 41.0 33.0 41.0 39 36.79934015965832 40.0 35.0 41.0 32.0 41.0 40 36.7599254799829 39.0 35.0 41.0 32.0 41.0 41 36.6896402260411 39.0 35.0 41.0 32.0 41.0 42 36.60220325829397 39.0 35.0 41.0 32.0 41.0 43 36.4939162661425 39.0 35.0 41.0 32.0 41.0 44 36.400689081252075 39.0 35.0 41.0 31.0 41.0 45 36.318076125313546 39.0 35.0 41.0 31.0 41.0 46 36.22197432264095 38.0 35.0 41.0 31.0 41.0 47 36.11060115915104 38.0 35.0 41.0 31.0 41.0 48 36.0097709683541 38.0 35.0 41.0 31.0 41.0 49 35.915730428342414 38.0 35.0 41.0 31.0 41.0 50 35.816013016635566 38.0 35.0 41.0 31.0 41.0 51 35.71032817014665 37.0 35.0 40.0 30.0 41.0 52 35.46482192950135 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 5.0 12 8.0 13 14.0 14 21.0 15 40.0 16 91.0 17 190.0 18 404.0 19 806.0 20 1441.0 21 2377.0 22 3868.0 23 6564.0 24 11555.0 25 19202.0 26 26777.0 27 29767.0 28 30124.0 29 30117.0 30 32999.0 31 39069.0 32 48425.0 33 63880.0 34 139117.0 35 264332.0 36 202838.0 37 232197.0 38 361707.0 39 1148711.0 40 11888.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.884259160121303 21.599876538378325 24.154838004617996 22.361026296882372 2 31.41599847002105 22.394033082102716 24.875486148595513 21.31448229928072 3 26.519475110890244 23.74804968296503 28.946544514486433 20.78593069165829 4 23.742253189363694 27.17174678257685 26.514933908896843 22.571066119162616 5 21.83361921984365 36.448093322808575 23.944281297558014 17.77400615978976 6 84.48714322951088 2.819311110733703 10.179381170773562 2.5141644889818626 7 85.72434387015264 2.370618201580634 8.625699363567154 3.2793385646995756 8 78.7263885186599 4.736141396046718 12.26419900950108 4.273271075792292 9 38.27217971050022 29.744466933034623 16.97490229031646 15.008451066148698 10 29.9972974310088 22.979626617203255 28.58110697521242 18.44196897657552 11 27.843512394527814 20.446743515126634 31.97995668505546 19.729787405290093 12 21.755458857079145 24.976426362009853 33.618112233407444 19.650002547503558 13 18.493066729086657 28.950605752041508 33.060282795047065 19.49604472382477 14 17.13495197032786 26.91315671134274 36.76686355054063 19.185027767788775 15 19.872927568935815 22.37874806075907 37.37054805293196 20.37777631737316 16 19.209912077898966 24.601241852603657 31.140535802762674 25.048310266734696 17 20.54336404859603 26.655821931716567 31.585352076067718 21.215461943619683 18 23.45600978241366 29.691449322770175 27.58145181120119 19.271089083614974 19 23.513790116719967 26.433007671308538 27.39083208850249 22.662370123469007 20 22.880384739493763 28.25945696085041 28.701799571280993 20.158358728374832 21 20.267938301679063 25.12285243604105 29.17471222439888 25.43449703788101 22 18.693027298162033 29.788180617263805 27.698193930738917 23.82059815383525 23 18.15723930362329 29.057637821788468 32.023522687919 20.761600186669245 24 22.785277940022166 26.855265616012204 29.308326939960878 21.051129504004752 25 19.18709530690772 29.28635933682206 27.51396142710411 24.01258392916611 26 18.487011793095455 27.99676873171982 30.27276009826718 23.24345937691755 27 21.026946680381343 26.885724897675274 31.618063498556786 20.4692649233866 28 20.9124197813282 27.649200637688136 28.662331726313937 22.77604785466972 29 22.66163171664081 26.678564862024995 29.38224146346326 21.277561957870937 30 26.568874527696533 26.579913709778058 26.092860565900228 20.758351196625185 31 25.405403808850103 27.760220104307347 26.75986345380933 20.07451263303322 32 24.785326674872827 27.574067742919233 25.430066596911832 22.210538985296104 33 21.57048794661614 26.740775637300473 29.349086996877276 22.339649419206108 34 20.52977736295723 27.65477560924101 29.60970768688892 22.205739340912835 35 24.507390344739996 28.379780353504884 27.394450281960648 19.718379019794472 36 20.56581161617318 30.313224792452303 28.125805324947002 20.99515826642752 37 20.760197213695676 29.906288789433695 29.105043540158626 20.228470456712007 38 19.42187175793252 28.290580808658856 27.141915146717743 25.145632286690883 39 22.170554255549312 27.089303660208806 29.560382110765453 21.17975997347643 40 19.031549908548314 26.44393609236583 31.4090205254946 23.115493473591247 41 21.038945791339522 29.58596790736243 26.276243901682605 23.09884239961544 42 20.758609639015056 27.14280123491158 28.12776210304172 23.970827023031646 43 21.828893416143195 27.52429912269885 30.22096085926926 20.425846601888697 44 21.528066474336303 28.771283653814205 27.392899627621436 22.307750244228057 45 22.47477786876591 27.558487358844303 27.78739347558495 22.17934129680484 46 23.775370735608266 27.18333976977952 27.422546661773488 21.618742832838723 47 21.178615442892724 28.799416953968453 28.23542181859264 21.78654578454618 48 20.638803131140314 27.895717757281247 27.819144969197357 23.646334142381082 49 20.223744653011554 26.82440021059363 29.948193376933794 23.00366175946102 50 19.577601757998977 27.0805904596361 30.716948725768255 22.62485905659667 51 20.03356797440977 24.988130110236757 29.880629152153897 25.097672763199576 52 20.07466031439886 24.84930962653598 30.065489301592667 25.010540757472494 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4573.0 1 4542.0 2 4511.0 3 32702.0 4 60893.0 5 36104.0 6 11315.0 7 12870.0 8 14425.0 9 17397.0 10 20369.0 11 23382.5 12 26396.0 13 26562.0 14 25151.5 15 23575.0 16 20652.5 17 17730.0 18 16663.5 19 15597.0 20 15063.5 21 14530.0 22 14685.5 23 14841.0 24 15348.5 25 15856.0 26 16947.0 27 18038.0 28 19229.5 29 20421.0 30 22425.0 31 24429.0 32 28739.0 33 33049.0 34 38873.5 35 44698.0 36 51161.0 37 57624.0 38 63231.0 39 74984.0 40 81130.0 41 97007.0 42 112884.0 43 143304.5 44 173725.0 45 204533.0 46 235341.0 47 242019.5 48 248698.0 49 251966.0 50 255234.0 51 225698.5 52 196163.0 53 174611.5 54 153060.0 55 145807.0 56 138554.0 57 132112.5 58 125671.0 59 119463.5 60 113256.0 61 106716.0 62 100176.0 63 89248.0 64 66248.5 65 54177.0 66 44137.5 67 34098.0 68 28883.5 69 23669.0 70 19854.0 71 16039.0 72 14510.5 73 12982.0 74 10109.0 75 7236.0 76 6044.5 77 4853.0 78 3805.5 79 2758.0 80 1955.5 81 1153.0 82 816.0 83 479.0 84 362.0 85 245.0 86 161.0 87 77.0 88 67.5 89 52.0 90 46.0 91 28.5 92 11.0 93 7.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2708534.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.513577694728788 #Duplication Level Percentage of deduplicated Percentage of total 1 73.25699955148124 16.492771510849852 2 10.593646224253588 4.770017546804069 3 4.167127220592778 2.8145082733390416 4 2.245603665836206 2.0222629040948483 5 1.3499730251615816 1.5196361293881662 6 0.9344184102435926 1.262226088704245 7 0.6809679060140472 1.0731716701764817 8 0.5172841940920568 0.931673431515735 9 0.4081056206600611 0.826912583854722 >10 3.9233547214172453 20.238236766037087 >50 1.2197423151373183 19.725105052670322 >100 0.6923499423284077 21.86104569660727 >500 0.004799823502745508 0.7306427575364508 >1k 0.004799823502745508 2.450194539055963 >5k 4.965334658012595E-4 0.8869961342512075 >10k+ 3.3102231053417296E-4 2.394598915114491 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49532 1.8287383507092767 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 14731 0.5438735493074852 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 9246 0.3413654766748359 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 9161 0.3382272476550045 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 5397 0.19925908258858852 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 4825 0.17814064730219373 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 4756 0.17559314374491883 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4713 0.17400556906429826 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 4522 0.16695378385503007 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4102 0.15144724046292202 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4048 0.1494535420267938 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 3654 0.1349069275113401 No Hit CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCTT 3482 0.12855662878885774 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13453772409724227 0.0 2 0.0 0.0 0.0 0.4229963515318619 0.0 3 0.0 0.0 0.0 0.9031823119074747 0.0 4 0.0 0.0 0.0 1.252079538229906 0.0 5 0.0 0.0 0.0 2.9721613241701967 0.0 6 0.0 0.0 0.0 3.781344446848369 0.0 7 0.0 0.0 0.0 5.315606154473231 0.0 8 0.0 0.0 0.0 7.0104344268892325 0.0 9 0.0 0.0 0.0 8.514864498654992 0.0 10 0.0 0.0 0.0 9.43248266405369 0.0 11 0.0 0.0 0.0 10.262784222018258 0.0 12 0.0 0.0 0.0 10.847565509607781 0.0 13 0.0 0.0 0.0 11.143002081568849 0.0 14 0.0 0.0 0.0 11.33151734480719 0.0 15 0.0 0.0 0.0 11.763965303739957 0.0 16 0.0 0.0 0.0 12.31655205362015 0.0 17 0.0 0.0 0.0 12.968639123599704 0.0 18 0.0 0.0 0.0 13.32196679089131 0.0 19 0.0 0.0 0.0 13.69951420214773 0.0 20 3.692034140978109E-5 0.0 0.0 14.122325951972543 0.0 21 7.384068281956217E-5 0.0 0.0 14.563376350453789 0.0 22 1.1076102422934326E-4 0.0 0.0 15.049321884089327 0.0 23 1.1076102422934326E-4 0.0 0.0 15.417491528627664 0.0 24 1.4768136563912435E-4 0.0 0.0 15.710565198738506 0.0 25 1.4768136563912435E-4 0.0 0.0 15.99311657154756 0.0 26 1.4768136563912435E-4 0.0 0.0 16.291986735259737 0.0 27 1.8460170704890543E-4 0.0 0.0 16.62412212658213 0.0 28 1.8460170704890543E-4 0.0 0.0 16.973720839391348 0.0 29 1.8460170704890543E-4 0.0 0.0 17.32387335732171 0.0 30 0.0027321052643238 0.0 0.0 17.64434192075861 0.0 31 0.0027321052643238 0.0 0.0 17.944873499834227 0.0 32 0.0027321052643238 0.0 0.0 18.26508362088126 0.0 33 0.0027321052643238 0.0 0.0 18.59880658688427 0.0 34 0.0027321052643238 0.0 0.0 18.994186523041616 0.0 35 0.0027690256057335814 0.0 0.0 19.304797355322105 0.0 36 0.0027690256057335814 0.0 0.0 19.648488813505757 0.0 37 0.0027690256057335814 0.0 0.0 20.013077184927344 0.0 38 0.0027690256057335814 0.0 0.0 20.551375762681953 0.0 39 0.0027690256057335814 0.0 0.0 20.926966395843657 0.0 40 0.0027690256057335814 0.0 0.0 21.273500720315862 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGTAA 30 1.862345E-6 46.0 28 ATATACG 20 6.3129776E-4 46.0 29 CCGCGAA 20 6.3129776E-4 46.0 46 CGTTTTT 14810 0.0 44.151924 1 CGACGGT 695 0.0 43.683456 27 CGGTCTA 705 0.0 43.063828 30 TAATCGG 55 4.7293724E-11 41.81818 1 TCACGAC 760 0.0 41.460526 24 AATGCGG 350 0.0 41.4 1 CCGCACT 5940 0.0 41.314816 33 CGCACTT 5955 0.0 41.210747 34 CCCGCAC 6060 0.0 41.179867 32 CCAATCG 190 0.0 41.157894 23 TACGGGA 1080 0.0 41.101852 3 ACCCGCA 6045 0.0 41.09181 31 TAACGGG 845 0.0 40.8284 2 CAACGCA 6410 0.0 40.76131 16 TATCCGG 170 0.0 40.588234 1 TATGACC 6265 0.0 40.529926 27 TCAACGC 6540 0.0 40.408257 15 >>END_MODULE